| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368785
Identifier: 157368785
GI number: 157368785
Start: 595492
End: 596286
Strand: Reverse
Name: 157368785
Synonym: Spro_0538
Alternate gene names: NA
Gene position: 596286-595492 (Counterclockwise)
Preceding gene: 157368786
Following gene: 157368784
Centisome position: 10.94
GC content: 60.63
Gene sequence:
>795_bases ATGAAACTCAACATTGAGCACAATACCCATTATACCTACGCCCAGCAGGTGCAGCGCAGCACCCAGTATCTGCGCCTGAC GCCACAGAATTCCCGGCACCAGCGCGTTATCTCCTGGCAACTGACGCTGCCGGAAGATGCGGTGTGCACCACCGATGCTT TCGGTAACGTACTGCACGTGCTGACGCTGGATCACCCGCATCAGGCGATCACCATTCAGGCCCACGGCGTGGTGGAGATT GAAGACGGCGTGGAAGATCAGGTGATGGGGCATCTGTCACCGCTGGTATTCCTGCGCCACAGCCCCTTGACCCAGCCCGA CAGTGCGATCCAGGCCTTTGCCCTGCGCTATTACCAACCGCAAGCGGTGCTTGCCGGGCTGGAAAACCTGATGGGCGAAC TGCTGCTGAAAATGCCTTACAGCCCAGGTTCCACCAGCGTCACCGACAGCGCGGCCCAGGCGTTCGCCACCGGTACCGGC GTCTGTCAGGATCACACCCACGTATTTCTGGCCTGCTGCCGTAGCCTGAATATTCCGGCGCGCTATGTCAGCGGTTATCT TTACAGCGAAGACTCGACGCACGTCGCCACCCACGCCTGGGCGGAAGCCTGGGTCGACGAACGCTGGCACAGTTTTGACG TTACCAACAACACCCGTCTGCCGAATCAGCACCTTAAGCTGGCGGTAGGCATCGACTATCTGGACGCCTGCCCGGTGCGC GGCATGCGGCTGGGCGGCGGCTGCGAGAATATGCAGACCATCGCCGAAGTGCAGATGATGCCCAGCGGGCAATAG
Upstream 100 bases:
>100_bases AGGATCTGAACCGGGTCGGGCTGAATGACTGGCTGGACGCGTTTCTTGGGCAAATTGGCGGCATCGCGGAAAGCATCCAT CACACCTATCTGGAGGCACA
Downstream 100 bases:
>100_bases CCTGTTGCCGAAAGTGAAGGTTTACGGCACGCTGGCGTTTGGCGGCGTGCCAGTTTTGTTTTGAGGAATTGTGGAATGAC CTATTGTGTGGCCATGCGCT
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKLNIEHNTHYTYAQQVQRSTQYLRLTPQNSRHQRVISWQLTLPEDAVCTTDAFGNVLHVLTLDHPHQAITIQAHGVVEI EDGVEDQVMGHLSPLVFLRHSPLTQPDSAIQAFALRYYQPQAVLAGLENLMGELLLKMPYSPGSTSVTDSAAQAFATGTG VCQDHTHVFLACCRSLNIPARYVSGYLYSEDSTHVATHAWAEAWVDERWHSFDVTNNTRLPNQHLKLAVGIDYLDACPVR GMRLGGGCENMQTIAEVQMMPSGQ
Sequences:
>Translated_264_residues MKLNIEHNTHYTYAQQVQRSTQYLRLTPQNSRHQRVISWQLTLPEDAVCTTDAFGNVLHVLTLDHPHQAITIQAHGVVEI EDGVEDQVMGHLSPLVFLRHSPLTQPDSAIQAFALRYYQPQAVLAGLENLMGELLLKMPYSPGSTSVTDSAAQAFATGTG VCQDHTHVFLACCRSLNIPARYVSGYLYSEDSTHVATHAWAEAWVDERWHSFDVTNNTRLPNQHLKLAVGIDYLDACPVR GMRLGGGCENMQTIAEVQMMPSGQ >Mature_264_residues MKLNIEHNTHYTYAQQVQRSTQYLRLTPQNSRHQRVISWQLTLPEDAVCTTDAFGNVLHVLTLDHPHQAITIQAHGVVEI EDGVEDQVMGHLSPLVFLRHSPLTQPDSAIQAFALRYYQPQAVLAGLENLMGELLLKMPYSPGSTSVTDSAAQAFATGTG VCQDHTHVFLACCRSLNIPARYVSGYLYSEDSTHVATHAWAEAWVDERWHSFDVTNNTRLPNQHLKLAVGIDYLDACPVR GMRLGGGCENMQTIAEVQMMPSGQ
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv2569c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013589 - InterPro: IPR002931 [H]
Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 29393; Mature: 29393
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNIEHNTHYTYAQQVQRSTQYLRLTPQNSRHQRVISWQLTLPEDAVCTTDAFGNVLHV CEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCCCEECCHHHCCEEEE LTLDHPHQAITIQAHGVVEIEDGVEDQVMGHLSPLVFLRHSPLTQPDSAIQAFALRYYQP EEECCCCCEEEEEECCEEEECCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCH QAVLAGLENLMGELLLKMPYSPGSTSVTDSAAQAFATGTGVCQDHTHVFLACCRSLNIPA HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCH RYVSGYLYSEDSTHVATHAWAEAWVDERWHSFDVTNNTRLPNQHLKLAVGIDYLDACPVR HHHCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHEEEEECCCHHHCCCCC GMRLGGGCENMQTIAEVQMMPSGQ CEEECCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MKLNIEHNTHYTYAQQVQRSTQYLRLTPQNSRHQRVISWQLTLPEDAVCTTDAFGNVLHV CEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCCCEECCHHHCCEEEE LTLDHPHQAITIQAHGVVEIEDGVEDQVMGHLSPLVFLRHSPLTQPDSAIQAFALRYYQP EEECCCCCEEEEEECCEEEECCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCH QAVLAGLENLMGELLLKMPYSPGSTSVTDSAAQAFATGTGVCQDHTHVFLACCRSLNIPA HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCH RYVSGYLYSEDSTHVATHAWAEAWVDERWHSFDVTNNTRLPNQHLKLAVGIDYLDACPVR HHHCCEEECCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHEEEEECCCHHHCCCCC GMRLGGGCENMQTIAEVQMMPSGQ CEEECCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]