| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157368784
Identifier: 157368784
GI number: 157368784
Start: 594688
End: 595416
Strand: Reverse
Name: 157368784
Synonym: Spro_0537
Alternate gene names: NA
Gene position: 595416-594688 (Counterclockwise)
Preceding gene: 157368785
Following gene: 157368781
Centisome position: 10.93
GC content: 56.79
Gene sequence:
>729_bases ATGACCTATTGTGTGGCCATGCGCTTGTCATCCGGGCTGGTCTTTGCTTCAGATTCGCGTACCAATGCCGGAGTGGACCA TATTTCTACCTTCCGCAAACTGCACGTGTTCCAGCAGGACGGCGAACGCTTGCTGGTGCTGCAAAGTGCCGGCAATCTAG CGACCACCCAGAGCATCATCAGCCTGCTGCAGCGCCGCTGCAAAGACGCCGAACGCCCCAATCTGCTGAATGCGCCCAGT CTGTACGAAGCCGCCACGCTGGTGGGCGAAACGGTGCGGGAAGTGATCCAACGCGACAGCGAAGCCCAGCAGAGCGGCAG TACCACCGATTTTAGCTGCAGCCTGTTGCTCGGCGGCCAGATCCATGGCGAAGAGATGCGGCTGTTTCATATCTATCCGC AGGGTAACTTTATCGAAGCCACCCGCGATACGCCCTATTTCCAGATTGGCGAAAGCAAATACGGCAAACCAATTATTGAT CGGGTACTGAACTACGATACCCCGCTGGAACAAGCGATGCAGTGCGCGCTAATCTCCCTCGATTCCACGCTACGCAGTAA CCTGTCGGTCGGCCTGCCGCTCGACGTGATGATCTATCCGCGCGACAGTTTCAGCAGCGCACAACAATACCGTATTACCG AAGATCATCCGCATTTCAACGCCATCCGCAAAGGCTGGGGCGAAGGGCTGGTCAGCATTTTCAAACAGTTGCCGCCGCTG CAGCTGTAG
Upstream 100 bases:
>100_bases GCAGATGATGCCCAGCGGGCAATAGCCTGTTGCCGAAAGTGAAGGTTTACGGCACGCTGGCGTTTGGCGGCGTGCCAGTT TTGTTTTGAGGAATTGTGGA
Downstream 100 bases:
>100_bases GTGCTGTGAGGGCTCGGCATGCAGAGCCCCTACGCATGCTGAGCCCGACGAGGCAGAAAATTATTCGATCGCGCTGGCAC GCAGCAGGGCTTCCAGCGGA
Product: 20S proteasome subunits A and B
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; T1 Family Peptidase; Peptidase T1A Family; 20S Proteasome Subunits A/B; 20S Proteasome A And Subunit Bs; Proteasome Protease; A And B-Type Proteasome Family Protein; T1A Family Peptidase; Proteasome-Type Protease-Like Protein; Proteasome A-Type And B-Type Family Protein; 20S Proteasome A And B Subunit; Proteasome Alpha-1 Subunit
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTYCVAMRLSSGLVFASDSRTNAGVDHISTFRKLHVFQQDGERLLVLQSAGNLATTQSIISLLQRRCKDAERPNLLNAPS LYEAATLVGETVREVIQRDSEAQQSGSTTDFSCSLLLGGQIHGEEMRLFHIYPQGNFIEATRDTPYFQIGESKYGKPIID RVLNYDTPLEQAMQCALISLDSTLRSNLSVGLPLDVMIYPRDSFSSAQQYRITEDHPHFNAIRKGWGEGLVSIFKQLPPL QL
Sequences:
>Translated_242_residues MTYCVAMRLSSGLVFASDSRTNAGVDHISTFRKLHVFQQDGERLLVLQSAGNLATTQSIISLLQRRCKDAERPNLLNAPS LYEAATLVGETVREVIQRDSEAQQSGSTTDFSCSLLLGGQIHGEEMRLFHIYPQGNFIEATRDTPYFQIGESKYGKPIID RVLNYDTPLEQAMQCALISLDSTLRSNLSVGLPLDVMIYPRDSFSSAQQYRITEDHPHFNAIRKGWGEGLVSIFKQLPPL QL >Mature_241_residues TYCVAMRLSSGLVFASDSRTNAGVDHISTFRKLHVFQQDGERLLVLQSAGNLATTQSIISLLQRRCKDAERPNLLNAPSL YEAATLVGETVREVIQRDSEAQQSGSTTDFSCSLLLGGQIHGEEMRLFHIYPQGNFIEATRDTPYFQIGESKYGKPIIDR VLNYDTPLEQAMQCALISLDSTLRSNLSVGLPLDVMIYPRDSFSSAQQYRITEDHPHFNAIRKGWGEGLVSIFKQLPPLQ L
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27041; Mature: 26910
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYCVAMRLSSGLVFASDSRTNAGVDHISTFRKLHVFQQDGERLLVLQSAGNLATTQSII CCEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH SLLQRRCKDAERPNLLNAPSLYEAATLVGETVREVIQRDSEAQQSGSTTDFSCSLLLGGQ HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCE IHGEEMRLFHIYPQGNFIEATRDTPYFQIGESKYGKPIIDRVLNYDTPLEQAMQCALISL ECCCEEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH DSTLRSNLSVGLPLDVMIYPRDSFSSAQQYRITEDHPHFNAIRKGWGEGLVSIFKQLPPL HHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC QL CC >Mature Secondary Structure TYCVAMRLSSGLVFASDSRTNAGVDHISTFRKLHVFQQDGERLLVLQSAGNLATTQSII CEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH SLLQRRCKDAERPNLLNAPSLYEAATLVGETVREVIQRDSEAQQSGSTTDFSCSLLLGGQ HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCE IHGEEMRLFHIYPQGNFIEATRDTPYFQIGESKYGKPIIDRVLNYDTPLEQAMQCALISL ECCCEEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH DSTLRSNLSVGLPLDVMIYPRDSFSSAQQYRITEDHPHFNAIRKGWGEGLVSIFKQLPPL HHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC QL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA