| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is stfR [C]
Identifier: 157368780
GI number: 157368780
Start: 586523
End: 587659
Strand: Reverse
Name: stfR [C]
Synonym: Spro_0533
Alternate gene names: 157368780
Gene position: 587659-586523 (Counterclockwise)
Preceding gene: 157368781
Following gene: 157368779
Centisome position: 10.79
GC content: 53.47
Gene sequence:
>1137_bases ATGGCTGAAGAAAAGAAAAATGCTCAGGTGGCTAACGGCGTTAATGACGATGTGACTGAGCTGAAATCACTGACCACCCT GCGTAAACGTGTCGTCAGTGACGGTGAAATTGTGTCTAAAGCAGCAAACGGTTTTCGCCTGGCAAACGGCAATACCGGCG TGATGCTACGTAACGACGGTAAGGATTTTTACGCCCTGACCACGCCAAGCGGCCAGGCACAGGACGGGCAGTGGAACACC CTGCGCCCCTTCTCTTTTAACCTCTCAACCGGCCGCGTGTCGCTGCGTAACGGGGTGGATATTTCCGGCGGCGCGATGGT GTCGCACAATGCAGGGATCTCTACGGCAACCACCGGCCCAGCGCAGCTTATCAACGGGCAAATCTATAATTCCGCGCCGG TGCATAGCGATTTCACCAGCGGCAACGTAACCACGACCATGGTGATGGGAACTCGGGTTATTGCTGACAAGGATAATTTT GGATTGATTTCTTACCGCGACTGGCAGGGAAACTGGAATGAGCTCCAGGTCAGGACCAACGCCGAGCTTTCAGTGGGGCA ATTAATCAAACGCAATGCCGATGGTTGGATTTGGGCTGCTGGCAATAAAAACGTTAACAATAATGCCGACCGCATTACCA ACGGCCTGCATATACAGGGAGCGGGAGATCTGTCCGCCGACCTATACCACTATGAACGTATCGGCAAGCACCACCTACTG GCGCTGCACGTTGCCAACGGTGGCGGCGACGGCTGGTATGAATTCCGGGACAAAGGCAATGCCTACACCAATGGCACCTG GAACAGCAGCTCCGATATTCGGATGAAAACCGACATCGAGAAAATAGATGGTGCGCTGGAGAAACTGGGGAAAATTGGCG GTTATACCTACCTGAAACAGGGCGTGCCGGAAGCCGGGGTCATTGCCCAAGAAGTAGAGAACGTATTACCTCAATCCGTC ACCACCACCGAACTGAAATTAAATGACGGCAGCGTTTTGAAAGACGCCCGCGGAATTAATATCAACGGCGTGGTCGCCCT TCTGGTCGAGGCGTTAAAGGAAGAACGTGAGGCCCGGCTTGCGCTGGAATTACGGTTGGTTGCGTTGGAAGAAGCGACTA GCGGTAAACAGGATTAG
Upstream 100 bases:
>100_bases CACGGAATGTGTACCTCCCCAGACCTGCCATTCAGGAGCAACGGAGGGTACCGGACGCTGTTAACCATCAGGAAACAGAG AGTCGAAAAGGAAGATAATC
Downstream 100 bases:
>100_bases CCAACATCGTCGTTTATACACTCGGTGATTTTCTTGTTTTTAAAGAGGAGCTTGATGTGGCTCGATACGAAGATACAACG CAGTTTGAACGTGATGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MAEEKKNAQVANGVNDDVTELKSLTTLRKRVVSDGEIVSKAANGFRLANGNTGVMLRNDGKDFYALTTPSGQAQDGQWNT LRPFSFNLSTGRVSLRNGVDISGGAMVSHNAGISTATTGPAQLINGQIYNSAPVHSDFTSGNVTTTMVMGTRVIADKDNF GLISYRDWQGNWNELQVRTNAELSVGQLIKRNADGWIWAAGNKNVNNNADRITNGLHIQGAGDLSADLYHYERIGKHHLL ALHVANGGGDGWYEFRDKGNAYTNGTWNSSSDIRMKTDIEKIDGALEKLGKIGGYTYLKQGVPEAGVIAQEVENVLPQSV TTTELKLNDGSVLKDARGININGVVALLVEALKEEREARLALELRLVALEEATSGKQD
Sequences:
>Translated_378_residues MAEEKKNAQVANGVNDDVTELKSLTTLRKRVVSDGEIVSKAANGFRLANGNTGVMLRNDGKDFYALTTPSGQAQDGQWNT LRPFSFNLSTGRVSLRNGVDISGGAMVSHNAGISTATTGPAQLINGQIYNSAPVHSDFTSGNVTTTMVMGTRVIADKDNF GLISYRDWQGNWNELQVRTNAELSVGQLIKRNADGWIWAAGNKNVNNNADRITNGLHIQGAGDLSADLYHYERIGKHHLL ALHVANGGGDGWYEFRDKGNAYTNGTWNSSSDIRMKTDIEKIDGALEKLGKIGGYTYLKQGVPEAGVIAQEVENVLPQSV TTTELKLNDGSVLKDARGININGVVALLVEALKEEREARLALELRLVALEEATSGKQD >Mature_377_residues AEEKKNAQVANGVNDDVTELKSLTTLRKRVVSDGEIVSKAANGFRLANGNTGVMLRNDGKDFYALTTPSGQAQDGQWNTL RPFSFNLSTGRVSLRNGVDISGGAMVSHNAGISTATTGPAQLINGQIYNSAPVHSDFTSGNVTTTMVMGTRVIADKDNFG LISYRDWQGNWNELQVRTNAELSVGQLIKRNADGWIWAAGNKNVNNNADRITNGLHIQGAGDLSADLYHYERIGKHHLLA LHVANGGGDGWYEFRDKGNAYTNGTWNSSSDIRMKTDIEKIDGALEKLGKIGGYTYLKQGVPEAGVIAQEVENVLPQSVT TTELKLNDGSVLKDARGININGVVALLVEALKEEREARLALELRLVALEEATSGKQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40843; Mature: 40712
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEKKNAQVANGVNDDVTELKSLTTLRKRVVSDGEIVSKAANGFRLANGNTGVMLRNDG CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCEEEEEEECC KDFYALTTPSGQAQDGQWNTLRPFSFNLSTGRVSLRNGVDISGGAMVSHNAGISTATTGP CEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCH AQLINGQIYNSAPVHSDFTSGNVTTTMVMGTRVIADKDNFGLISYRDWQGNWNELQVRTN HHHHCCEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCEEEEEEC AELSVGQLIKRNADGWIWAAGNKNVNNNADRITNGLHIQGAGDLSADLYHYERIGKHHLL CCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEE ALHVANGGGDGWYEFRDKGNAYTNGTWNSSSDIRMKTDIEKIDGALEKLGKIGGYTYLKQ EEEEECCCCCCCEEEECCCCEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHH GVPEAGVIAQEVENVLPQSVTTTELKLNDGSVLKDARGININGVVALLVEALKEEREARL CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHEE ALELRLVALEEATSGKQD EEEEEEEEEECCCCCCCC >Mature Secondary Structure AEEKKNAQVANGVNDDVTELKSLTTLRKRVVSDGEIVSKAANGFRLANGNTGVMLRNDG CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCEEEEEEECC KDFYALTTPSGQAQDGQWNTLRPFSFNLSTGRVSLRNGVDISGGAMVSHNAGISTATTGP CEEEEEECCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCH AQLINGQIYNSAPVHSDFTSGNVTTTMVMGTRVIADKDNFGLISYRDWQGNWNELQVRTN HHHHCCEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEEECCCCCCCEEEEEEC AELSVGQLIKRNADGWIWAAGNKNVNNNADRITNGLHIQGAGDLSADLYHYERIGKHHLL CCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHCCCEEEEECCCCCHHHHHHHHCCCCEEE ALHVANGGGDGWYEFRDKGNAYTNGTWNSSSDIRMKTDIEKIDGALEKLGKIGGYTYLKQ EEEEECCCCCCCEEEECCCCEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHH GVPEAGVIAQEVENVLPQSVTTTELKLNDGSVLKDARGININGVVALLVEALKEEREARL CCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHHEE ALELRLVALEEATSGKQD EEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA