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The map label for this gene is cda [H]

Identifier: 157368779

GI number: 157368779

Start: 584466

End: 586424

Strand: Reverse

Name: cda [H]

Synonym: Spro_0532

Alternate gene names: 157368779

Gene position: 586424-584466 (Counterclockwise)

Preceding gene: 157368780

Following gene: 157368778

Centisome position: 10.76

GC content: 50.08

Gene sequence:

>1959_bases
ATGACCTCTATGGGGTATGTGTGGCGTGGCGAGGGTTGGCAGCGAGGCTTCTCTGACAACGAAGATAATATCCTTGTTGA
AGCTTGGGTAGGGGGCCCCCCTAAAAAACCAGAGCCCTTGACCAATGTTTTTGAAAAGATTTCAGATATCAATAAGCCAA
TCTCTATTCACCCTGAAAATGACGATGTCATACCTTTCGGTGACGAGGCTAAGAAGATCTATCGTGACGACGCAAATAAA
GCGATCGACTTAGCCTCTGGTATTACCAGTGACATTGAAAGGAAAATGCAAGAAACCGATAAGGATATTGCTAATGTCAG
TAGTCAATTAACACAACCACAGCGTACAGAATTAGAGAAAGCCAGTCTTAATCTGGTGCTCAGTAAACTAAAGGTAAAGC
AAGAGCGGTTGAATGTTCTGCGCCATAATGCGAACAAAAGCAGGGCGCATGAAGAATATACCAAATATTATAATGAAGAA
ATGTTCATGGCATATGATGCTACCTCTTGGAGGGATAATTACAGAAAAGAAAATAGTAAAAAAGCGCAAGAAAAACGTCA
AGAAGAACAGCAGCATAAAATAGATGCTGAGACAGCAAGGCAACGTGTGAGTGTTCTTGAGAACGAACAAAGAGAAAAAG
AAAATGAAGTCCATCGCCTTAGAGAATTAGAGTTTGCTGCCGAGGAAGCCCGCAAGGCCGAGGAAGCCCGCAAGGCCGAG
GAAGCCCGCAAGGCCGAGGAAGCCCGCAGGGCCGAGGAAGCCCGCAGGGCCGAGGAAGCCCGCAGGGCCGAGGAAGCCCG
CAGGGCCGAGGAAGCCCGCAAGGTTGAAGCGGCGCGGAAAGCACTGTTTGCCAAAGCAGGTATTTTGGACGCACCGGCTT
ACACGCCTGAAAAAGCGAAAGCAGCCACTGCTGCGCTGGCTACCGCAGGCGCCATGGTACTCAACCGTGCCCCGGGGATG
TTACAGTTATCAACCGCCGCCGAAGGCGTTTTGACCACCACCAGCGAGTTGGCTGGCTCAATAGCCGGGGCTGTGTGGCG
AGGAGCTATTGCGTTAGCTGAAGCCGCAACCGTCAGCACCGCAGGGGCTACTGTTAGCGCTTTAGTTATGGGCTTCTGGC
CCACAGAAGCAGGGAAAGGCAGCGACAAGCTTTACGGACGCGATATTGTCATGTTTGGCTTTCAGGCCAATCTAATTGCT
GCCGGCAAAGTCAGCATTTCGCCGGAAATGCACTCTGTCGACTTACCGGTTCGGGGCTCTTTAGTTATGGAGAATGGTCA
GCAACAGGTCAGGCTGGTTAAAACGGGTATAGGTGGCGTACCCGCGAGCGTGCCTATTCTAAAGGCGGTTCGTGATGAGA
AAACCGGGCTGGATAGGATTACGCTTCCGTCGGTGGGTGGTGCTCCATCGCGAACCATCCTGATTAACCCAGCCCCGGTT
GGGCCGACAGCACCTCCCCATACAGGAAACAGTTCGCCTGCCCCCGTCACGCCAGTGCATACTGGCACGACAGTAAAACA
GGCTGATAGTATAGTTACCACCAGTTTCCCGGCGGATGACCTTAAAGAGTTGCAGGACTTCATTTACTGGCAGCCGGATG
CCACAGGCAGTGGCGTCGAGCCGATTTATGTAATGCAGAGTGATCCGCTTGATTCGGGACGATTTACCCGCAAACAACTG
GATAAAAAATTCAAGCATGCCATTGATTTTGGTATTAGTGACACAAAGAAAAATCGTGAAACGCTGACAAAATTCCGTGA
TGAGGTCAATGCGCATTTGGCAGATAAAGAGACCGTTGAGAGGGGAACATACCGACGGGAAAAAGGGTCTAAAGTTTACT
TCAATCCCAAGAGCATGAGGGTTGTTATCCTCAAAGCCAACGGCGATTTCCTCTCAGGATGGAAAATTGATCCAAAGGAA
GAAAACGGGAAAATATATCTAGAGACGGGGGTATTATGA

Upstream 100 bases:

>100_bases
AGCCAACATCGTCGTTTATACACTCGGTGATTTTCTTGTTTTTAAAGAGGAGCTTGATGTGGCTCGATACGAAGATACAA
CGCAGTTTGAACGTGATGTG

Downstream 100 bases:

>100_bases
GCAGAATGAAATTGGTAGAGCTCGGGAAAAGTTTTATTGAAAAAAAGATTAGTGCAGAACAATTCGCGGAAGACATTGTA
ATTGAAAGGAGAAAGTTATA

Product: S-type pyocin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 652; Mature: 651

Protein sequence:

>652_residues
MTSMGYVWRGEGWQRGFSDNEDNILVEAWVGGPPKKPEPLTNVFEKISDINKPISIHPENDDVIPFGDEAKKIYRDDANK
AIDLASGITSDIERKMQETDKDIANVSSQLTQPQRTELEKASLNLVLSKLKVKQERLNVLRHNANKSRAHEEYTKYYNEE
MFMAYDATSWRDNYRKENSKKAQEKRQEEQQHKIDAETARQRVSVLENEQREKENEVHRLRELEFAAEEARKAEEARKAE
EARKAEEARRAEEARRAEEARRAEEARRAEEARKVEAARKALFAKAGILDAPAYTPEKAKAATAALATAGAMVLNRAPGM
LQLSTAAEGVLTTTSELAGSIAGAVWRGAIALAEAATVSTAGATVSALVMGFWPTEAGKGSDKLYGRDIVMFGFQANLIA
AGKVSISPEMHSVDLPVRGSLVMENGQQQVRLVKTGIGGVPASVPILKAVRDEKTGLDRITLPSVGGAPSRTILINPAPV
GPTAPPHTGNSSPAPVTPVHTGTTVKQADSIVTTSFPADDLKELQDFIYWQPDATGSGVEPIYVMQSDPLDSGRFTRKQL
DKKFKHAIDFGISDTKKNRETLTKFRDEVNAHLADKETVERGTYRREKGSKVYFNPKSMRVVILKANGDFLSGWKIDPKE
ENGKIYLETGVL

Sequences:

>Translated_652_residues
MTSMGYVWRGEGWQRGFSDNEDNILVEAWVGGPPKKPEPLTNVFEKISDINKPISIHPENDDVIPFGDEAKKIYRDDANK
AIDLASGITSDIERKMQETDKDIANVSSQLTQPQRTELEKASLNLVLSKLKVKQERLNVLRHNANKSRAHEEYTKYYNEE
MFMAYDATSWRDNYRKENSKKAQEKRQEEQQHKIDAETARQRVSVLENEQREKENEVHRLRELEFAAEEARKAEEARKAE
EARKAEEARRAEEARRAEEARRAEEARRAEEARKVEAARKALFAKAGILDAPAYTPEKAKAATAALATAGAMVLNRAPGM
LQLSTAAEGVLTTTSELAGSIAGAVWRGAIALAEAATVSTAGATVSALVMGFWPTEAGKGSDKLYGRDIVMFGFQANLIA
AGKVSISPEMHSVDLPVRGSLVMENGQQQVRLVKTGIGGVPASVPILKAVRDEKTGLDRITLPSVGGAPSRTILINPAPV
GPTAPPHTGNSSPAPVTPVHTGTTVKQADSIVTTSFPADDLKELQDFIYWQPDATGSGVEPIYVMQSDPLDSGRFTRKQL
DKKFKHAIDFGISDTKKNRETLTKFRDEVNAHLADKETVERGTYRREKGSKVYFNPKSMRVVILKANGDFLSGWKIDPKE
ENGKIYLETGVL
>Mature_651_residues
TSMGYVWRGEGWQRGFSDNEDNILVEAWVGGPPKKPEPLTNVFEKISDINKPISIHPENDDVIPFGDEAKKIYRDDANKA
IDLASGITSDIERKMQETDKDIANVSSQLTQPQRTELEKASLNLVLSKLKVKQERLNVLRHNANKSRAHEEYTKYYNEEM
FMAYDATSWRDNYRKENSKKAQEKRQEEQQHKIDAETARQRVSVLENEQREKENEVHRLRELEFAAEEARKAEEARKAEE
ARKAEEARRAEEARRAEEARRAEEARRAEEARKVEAARKALFAKAGILDAPAYTPEKAKAATAALATAGAMVLNRAPGML
QLSTAAEGVLTTTSELAGSIAGAVWRGAIALAEAATVSTAGATVSALVMGFWPTEAGKGSDKLYGRDIVMFGFQANLIAA
GKVSISPEMHSVDLPVRGSLVMENGQQQVRLVKTGIGGVPASVPILKAVRDEKTGLDRITLPSVGGAPSRTILINPAPVG
PTAPPHTGNSSPAPVTPVHTGTTVKQADSIVTTSFPADDLKELQDFIYWQPDATGSGVEPIYVMQSDPLDSGRFTRKQLD
KKFKHAIDFGISDTKKNRETLTKFRDEVNAHLADKETVERGTYRREKGSKVYFNPKSMRVVILKANGDFLSGWKIDPKEE
NGKIYLETGVL

Specific function: Colicin D inhibits protein synthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cloacin colicin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003058
- InterPro:   IPR010715
- InterPro:   IPR016128 [H]

Pfam domain/function: PF03515 Cloacin; PF06958 Pyocin_S [H]

EC number: NA

Molecular weight: Translated: 72037; Mature: 71906

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSMGYVWRGEGWQRGFSDNEDNILVEAWVGGPPKKPEPLTNVFEKISDINKPISIHPEN
CCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCC
DDVIPFGDEAKKIYRDDANKAIDLASGITSDIERKMQETDKDIANVSSQLTQPQRTELEK
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASLNLVLSKLKVKQERLNVLRHNANKSRAHEEYTKYYNEEMFMAYDATSWRDNYRKENSK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
KAQEKRQEEQQHKIDAETARQRVSVLENEQREKENEVHRLRELEFAAEEARKAEEARKAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARKAEEARRAEEARRAEEARRAEEARRAEEARKVEAARKALFAKAGILDAPAYTPEKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AATAALATAGAMVLNRAPGMLQLSTAAEGVLTTTSELAGSIAGAVWRGAIALAEAATVST
HHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGATVSALVMGFWPTEAGKGSDKLYGRDIVMFGFQANLIAAGKVSISPEMHSVDLPVRGS
CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEECEEEECEEEECCCCCCCCCCCCCC
LVMENGQQQVRLVKTGIGGVPASVPILKAVRDEKTGLDRITLPSVGGAPSRTILINPAPV
EEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCC
GPTAPPHTGNSSPAPVTPVHTGTTVKQADSIVTTSFPADDLKELQDFIYWQPDATGSGVE
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHHEEECCCCCCCCCC
PIYVMQSDPLDSGRFTRKQLDKKFKHAIDFGISDTKKNRETLTKFRDEVNAHLADKETVE
EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
RGTYRREKGSKVYFNPKSMRVVILKANGDFLSGWKIDPKEENGKIYLETGVL
HCCHHHCCCCEEEECCCCEEEEEEEECCCEECCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure 
TSMGYVWRGEGWQRGFSDNEDNILVEAWVGGPPKKPEPLTNVFEKISDINKPISIHPEN
CCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCC
DDVIPFGDEAKKIYRDDANKAIDLASGITSDIERKMQETDKDIANVSSQLTQPQRTELEK
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ASLNLVLSKLKVKQERLNVLRHNANKSRAHEEYTKYYNEEMFMAYDATSWRDNYRKENSK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
KAQEKRQEEQQHKIDAETARQRVSVLENEQREKENEVHRLRELEFAAEEARKAEEARKAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EARKAEEARRAEEARRAEEARRAEEARRAEEARKVEAARKALFAKAGILDAPAYTPEKAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
AATAALATAGAMVLNRAPGMLQLSTAAEGVLTTTSELAGSIAGAVWRGAIALAEAATVST
HHHHHHHHHHHHHHHCCCCCEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGATVSALVMGFWPTEAGKGSDKLYGRDIVMFGFQANLIAAGKVSISPEMHSVDLPVRGS
CCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECEECEEEECEEEECCCCCCCCCCCCCC
LVMENGQQQVRLVKTGIGGVPASVPILKAVRDEKTGLDRITLPSVGGAPSRTILINPAPV
EEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCC
GPTAPPHTGNSSPAPVTPVHTGTTVKQADSIVTTSFPADDLKELQDFIYWQPDATGSGVE
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHHEEECCCCCCCCCC
PIYVMQSDPLDSGRFTRKQLDKKFKHAIDFGISDTKKNRETLTKFRDEVNAHLADKETVE
EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHH
RGTYRREKGSKVYFNPKSMRVVILKANGDFLSGWKIDPKEENGKIYLETGVL
HCCHHHCCCCEEEECCCCEEEEEEEECCCEECCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2677603 [H]