Click here to switch to the map view.

The map label for this gene is cdi [H]

Identifier: 157368778

GI number: 157368778

Start: 584203

End: 584460

Strand: Reverse

Name: cdi [H]

Synonym: Spro_0531

Alternate gene names: 157368778

Gene position: 584460-584203 (Counterclockwise)

Preceding gene: 157368779

Following gene: 157368776

Centisome position: 10.73

GC content: 37.6

Gene sequence:

>258_bases
ATGAAATTGGTAGAGCTCGGGAAAAGTTTTATTGAAAAAAAGATTAGTGCAGAACAATTCGCGGAAGACATTGTAATTGA
AAGGAGAAAGTTATATGGCATTGAGGAGCCTAATAAATCAGTAGATAAATGCGGCGGAGAACTGTTTATTTTAGCTGATT
GTTATAACCCGGAACCCGATCGCGATGATTATGAACTGGATGAAACTGGGTTAAGGAAGGAAGTGAAAGCGATTCTGGAG
AAATTCAATCTGCTTTAA

Upstream 100 bases:

>100_bases
TTATCCTCAAAGCCAACGGCGATTTCCTCTCAGGATGGAAAATTGATCCAAAGGAAGAAAACGGGAAAATATATCTAGAG
ACGGGGGTATTATGAGCAGA

Downstream 100 bases:

>100_bases
TTCCCCTGCCCTTCTGATCAGTTTAATTTAAAACAACGCCCAAAAAATTCTCGTTTGTTGGGCGTTTTCATTAATAGCCT
CTTACTATGCTATCCATTTA

Product: colicin D

Products: NA

Alternate protein names: Microcin-D immunity protein [H]

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKLVELGKSFIEKKISAEQFAEDIVIERRKLYGIEEPNKSVDKCGGELFILADCYNPEPDRDDYELDETGLRKEVKAILE
KFNLL

Sequences:

>Translated_85_residues
MKLVELGKSFIEKKISAEQFAEDIVIERRKLYGIEEPNKSVDKCGGELFILADCYNPEPDRDDYELDETGLRKEVKAILE
KFNLL
>Mature_85_residues
MKLVELGKSFIEKKISAEQFAEDIVIERRKLYGIEEPNKSVDKCGGELFILADCYNPEPDRDDYELDETGLRKEVKAILE
KFNLL

Specific function: This protein is able to protect a cell, which harbors the plasmid ColD-CA23 encoding colicin D, against colicin D [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015287 [H]

Pfam domain/function: PF09204 ColicinD [H]

EC number: NA

Molecular weight: Translated: 9838; Mature: 9838

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVELGKSFIEKKISAEQFAEDIVIERRKLYGIEEPNKSVDKCGGELFILADCYNPEPD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCC
RDDYELDETGLRKEVKAILEKFNLL
CCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLVELGKSFIEKKISAEQFAEDIVIERRKLYGIEEPNKSVDKCGGELFILADCYNPEPD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCC
RDDYELDETGLRKEVKAILEKFNLL
CCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2677603 [H]