| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is phnJ [H]
Identifier: 157368765
GI number: 157368765
Start: 570683
End: 571543
Strand: Reverse
Name: phnJ [H]
Synonym: Spro_0518
Alternate gene names: 157368765
Gene position: 571543-570683 (Counterclockwise)
Preceding gene: 157368766
Following gene: 157368764
Centisome position: 10.49
GC content: 60.16
Gene sequence:
>861_bases ATGAGTGAAGTATTAACCGGTTATAACCTGGGCTATCTGGACGAACAGACCAAACGCATGATCCGCCGCGCTATTTTGAA GGCGGTGGCCATCCCCGGCTATCAGGTGCCGTTCGGCGGCCGTGAGATGCCAATGCCCTACGGTTGGGGCACCGGCGGCA TTCAGTTGACTGCCAGCGTGATTGGCCGCGCCGACGTGCTGAAGGTGATCGACCAGGGGGCCGATGACACCACCAATGCG GTTTCCATCCGTCGCTTCTTCCAGCGCGTTGCCGGCGTCGCCACCACCGAGCGCACGCCGGAGGCCACGCTGATCCAGAC CCGGCACCGCATCCCGGAAACCGCGCTGCGTGAAGACCAGATCCTGATTTATCAGGTGCCAATCCCGGAGCCGCTGCGCT TTATCGAGCCGCGTGAAACCGAGACCCGCAAAATGCACGCGCTGGAAGAATACGGCGTGATGCAGGTAAAACTGTACGAA GACATCGCGCGCTACGGCCATATCGCCACCACCTACGCCTATCCGGTGAAGGTCAACGATCGCTACGTGATGGATCCGTC ACCGATCCCGAAATTCGATAACCCGAAAATGCACATGATGCCGGCGCTGCAGCTGTTTGGGGCCGGACGCGAGAAGCGTA TCTACGCCCTGCCGCCGTTCACCAAGGTAGAGAGCCTGGACTTCGACGACCATCCTTTCACCGTACAGCAGTGGGAAGAG CCTTGTGCCCTGTGTGGCTCACGCCACAGCTATCTCGATGAGGTGGTGCTCGACGATCAGGGCAGCCGCATGTTCGTTTG TTCCGACACCGATTACTGCCAGCAGCAGCTGGCGCAACCTTCGCAAGAGGCGCAGCACTGA
Upstream 100 bases:
>100_bases GTTTCCCACCTCAAATTGCCGCACTACGTTGATTTCCAGGCCGAACTGGAATTGCTCAAGCGCCTGCGGCAGGAATTCAG CGAACGTCAGGAGGCCCGCG
Downstream 100 bases:
>100_bases TGACTTCCACCCCTCTGAGCACCACACCGCTGCTGTCGGTGACTAACCTCACCCATCTGTACGCACCGGGCAAGGGCTTT AGCGATGTCTCTTTCGATAT
Product: phosphonate metabolism protein PhnJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSEVLTGYNLGYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGRADVLKVIDQGADDTTNA VSIRRFFQRVAGVATTERTPEATLIQTRHRIPETALREDQILIYQVPIPEPLRFIEPRETETRKMHALEEYGVMQVKLYE DIARYGHIATTYAYPVKVNDRYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPFTKVESLDFDDHPFTVQQWEE PCALCGSRHSYLDEVVLDDQGSRMFVCSDTDYCQQQLAQPSQEAQH
Sequences:
>Translated_286_residues MSEVLTGYNLGYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGRADVLKVIDQGADDTTNA VSIRRFFQRVAGVATTERTPEATLIQTRHRIPETALREDQILIYQVPIPEPLRFIEPRETETRKMHALEEYGVMQVKLYE DIARYGHIATTYAYPVKVNDRYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPFTKVESLDFDDHPFTVQQWEE PCALCGSRHSYLDEVVLDDQGSRMFVCSDTDYCQQQLAQPSQEAQH >Mature_285_residues SEVLTGYNLGYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGRADVLKVIDQGADDTTNAV SIRRFFQRVAGVATTERTPEATLIQTRHRIPETALREDQILIYQVPIPEPLRFIEPRETETRKMHALEEYGVMQVKLYED IARYGHIATTYAYPVKVNDRYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPFTKVESLDFDDHPFTVQQWEEP CALCGSRHSYLDEVVLDDQGSRMFVCSDTDYCQQQLAQPSQEAQH
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=278, Percent_Identity=88.1294964028777, Blast_Score=520, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 32590; Mature: 32458
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVLTGYNLGYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEHHHH IGRADVLKVIDQGADDTTNAVSIRRFFQRVAGVATTERTPEATLIQTRHRIPETALREDQ HCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCC ILIYQVPIPEPLRFIEPRETETRKMHALEEYGVMQVKLYEDIARYGHIATTYAYPVKVND EEEEECCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEEEEEEEECC RYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPFTKVESLDFDDHPFTVQQWEE EEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH PCALCGSRHSYLDEVVLDDQGSRMFVCSDTDYCQQQLAQPSQEAQH HHHHHCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCHHHCCC >Mature Secondary Structure SEVLTGYNLGYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEHHHH IGRADVLKVIDQGADDTTNAVSIRRFFQRVAGVATTERTPEATLIQTRHRIPETALREDQ HCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCC ILIYQVPIPEPLRFIEPRETETRKMHALEEYGVMQVKLYEDIARYGHIATTYAYPVKVND EEEEECCCCCCHHHCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCEEEEEEEEEEECC RYVMDPSPIPKFDNPKMHMMPALQLFGAGREKRIYALPPFTKVESLDFDDHPFTVQQWEE EEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHH PCALCGSRHSYLDEVVLDDQGSRMFVCSDTDYCQQQLAQPSQEAQH HHHHHCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]