BacMap

Definition	Serratia proteamaculans 568 chromosome, complete genome.
Accession	NC_009832
Length	5,448,853

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The map label for this gene is phnK [H]

Identifier: 157368764

GI number: 157368764

Start: 569895

End: 570683

Strand: Reverse

Name: phnK [H]

Synonym: Spro_0517

Alternate gene names: 157368764

Gene position: 570683-569895 (Counterclockwise)

Preceding gene: 157368765

Following gene: 157368763

Centisome position: 10.47

GC content: 62.86

Gene sequence:

>789_bases
ATGACTTCCACCCCTCTGAGCACCACACCGCTGCTGTCGGTGACTAACCTCACCCATCTGTACGCACCGGGCAAGGGCTT
TAGCGATGTCTCTTTCGATATCTATCCCGGAGAAGTGCTGGGCATCGTTGGCGAATCCGGCTCCGGCAAGACCACGCTGC
TGAAGTCGATTTCCGCCCGGCTGGCACCGCAGCACGGACAAATCCTTTATCGTCCGCAGGCCGGGCAACAGCACGACCTG
TACGCGATGGCGGAAAGCGATCGCCGCCGCCTGCTGCGTACCGACTGGGGCGTGGTGCATCAGCATCCGCTCGACGGACT
GCGCCCCCAGGTTTCTGCCGGTGGCAACATCGGTGAACGCCTGATGGCTATCGGCCAGCGTCACTACGGCGACATTCGCC
GTCAGGCCGGCCAGTGGCTGGAGGACGTCGAGATCCCGGTATCACGCCTGGATGACCTGCCGACCACCTTCTCCGGCGGC
ATGCAACAGCGGTTGCAGATTGCCCGCAATCTGGTGACCCACCCGAAGCTGGTGTTTATGGACGAACCCACCGGCGGGCT
GGACGTTTCGGTACAGGCGCGGCTGCTCGATCTGCTGCGCACGCTGGTGGTGGAAATGCAGTTGGCGGCGGTGATCGTCA
CCCACGATCTCGGCGTAGCGCGCCTGCTGGCACACCGACTGCTGGTGATGAAACAGGGCGAGGTGGTGGAAAGCGGCCTG
ACCGACCGGGTGCTGGACGATCCGCACCATCCTTATACCCAACTGCTGGTTTCTTCGGTGCTGTCGTAA

Upstream 100 bases:

>100_bases
AGGTGGTGCTCGACGATCAGGGCAGCCGCATGTTCGTTTGTTCCGACACCGATTACTGCCAGCAGCAGCTGGCGCAACCT
TCGCAAGAGGCGCAGCACTG

Downstream 100 bases:

>100_bases
CGCAAGGTAATTACAGATGACTATTCAAATCCGGGTTGAACACCTCAGCAAAACCTTTGTGCTCCACCAGCAGCACGGCA
CGCAACTGCCGGTGCTGCAC

Product: phosphonate C-P lyase system protein PhnK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTSTPLSTTPLLSVTNLTHLYAPGKGFSDVSFDIYPGEVLGIVGESGSGKTTLLKSISARLAPQHGQILYRPQAGQQHDL
YAMAESDRRRLLRTDWGVVHQHPLDGLRPQVSAGGNIGERLMAIGQRHYGDIRRQAGQWLEDVEIPVSRLDDLPTTFSGG
MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRTLVVEMQLAAVIVTHDLGVARLLAHRLLVMKQGEVVESGL
TDRVLDDPHHPYTQLLVSSVLS

Sequences:

>Translated_262_residues
MTSTPLSTTPLLSVTNLTHLYAPGKGFSDVSFDIYPGEVLGIVGESGSGKTTLLKSISARLAPQHGQILYRPQAGQQHDL
YAMAESDRRRLLRTDWGVVHQHPLDGLRPQVSAGGNIGERLMAIGQRHYGDIRRQAGQWLEDVEIPVSRLDDLPTTFSGG
MQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRTLVVEMQLAAVIVTHDLGVARLLAHRLLVMKQGEVVESGL
TDRVLDDPHHPYTQLLVSSVLS
>Mature_261_residues
TSTPLSTTPLLSVTNLTHLYAPGKGFSDVSFDIYPGEVLGIVGESGSGKTTLLKSISARLAPQHGQILYRPQAGQQHDLY
AMAESDRRRLLRTDWGVVHQHPLDGLRPQVSAGGNIGERLMAIGQRHYGDIRRQAGQWLEDVEIPVSRLDDLPTTFSGGM
QQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRTLVVEMQLAAVIVTHDLGVARLLAHRLLVMKQGEVVESGLT
DRVLDDPHHPYTQLLVSSVLS

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]

COG id: COG4107

COG function: function code P; ABC-type phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI21536376, Length=241, Percent_Identity=24.896265560166, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=26.4462809917355, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=26.4462809917355, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI42490749, Length=262, Percent_Identity=27.0992366412214, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI171184400, Length=241, Percent_Identity=26.9709543568465, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI150417984, Length=251, Percent_Identity=27.4900398406374, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI48994997, Length=252, Percent_Identity=85.7142857142857, Blast_Score=431, Evalue=1e-122,
Organism=Escherichia coli, GI1789963, Length=256, Percent_Identity=35.9375, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1789962, Length=261, Percent_Identity=34.4827586206897, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=36.2869198312236, Blast_Score=143, Evalue=9e-36,
Organism=Escherichia coli, GI145693107, Length=272, Percent_Identity=33.8235294117647, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787758, Length=236, Percent_Identity=38.135593220339, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1788506, Length=239, Percent_Identity=36.4016736401674, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI48994883, Length=256, Percent_Identity=33.203125, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787759, Length=258, Percent_Identity=34.4961240310078, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1788225, Length=257, Percent_Identity=31.9066147859922, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1787548, Length=262, Percent_Identity=27.8625954198473, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1789891, Length=243, Percent_Identity=29.6296296296296, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786398, Length=255, Percent_Identity=26.2745098039216, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789672, Length=252, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787089, Length=229, Percent_Identity=31.0043668122271, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87081834, Length=230, Percent_Identity=34.3478260869565, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786872, Length=254, Percent_Identity=29.5275590551181, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788761, Length=240, Percent_Identity=30.4166666666667, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=28.9915966386555, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789032, Length=237, Percent_Identity=29.535864978903, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI87081791, Length=274, Percent_Identity=26.6423357664234, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787547, Length=257, Percent_Identity=28.7937743190661, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787792, Length=244, Percent_Identity=29.5081967213115, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788644, Length=259, Percent_Identity=30.1158301158301, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=31.6239316239316, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=25.2032520325203, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=26.8085106382979, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790190, Length=230, Percent_Identity=27.3913043478261, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=33.175355450237, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790525, Length=244, Percent_Identity=26.6393442622951, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790162, Length=255, Percent_Identity=27.843137254902, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787164, Length=229, Percent_Identity=29.2576419213974, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787712, Length=248, Percent_Identity=28.2258064516129, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787105, Length=243, Percent_Identity=32.5102880658436, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789873, Length=226, Percent_Identity=27.8761061946903, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787370, Length=265, Percent_Identity=23.7735849056604, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788450, Length=244, Percent_Identity=27.0491803278689, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788210, Length=243, Percent_Identity=28.8065843621399, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790534, Length=200, Percent_Identity=31.5, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786563, Length=223, Percent_Identity=30.9417040358744, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786253, Length=238, Percent_Identity=27.7310924369748, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1789991, Length=228, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790467, Length=245, Percent_Identity=26.530612244898, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI48995001, Length=234, Percent_Identity=26.0683760683761, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788472, Length=243, Percent_Identity=27.1604938271605, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788897, Length=214, Percent_Identity=24.2990654205607, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786345, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082267, Length=236, Percent_Identity=26.271186440678, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788053, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786319, Length=241, Percent_Identity=25.3112033195021, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789751, Length=208, Percent_Identity=24.5192307692308, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=237, Percent_Identity=24.8945147679325, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=237, Percent_Identity=25.7383966244726, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=28.6363636363636, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=26.1467889908257, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=248, Percent_Identity=28.2258064516129, Blast_Score=73, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323959, Length=252, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641565, Length=226, Percent_Identity=28.7610619469027, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24659289, Length=236, Percent_Identity=28.3898305084746, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136662, Length=235, Percent_Identity=27.2340425531915, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR012700
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 28768; Mature: 28636

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPLSTTPLLSVTNLTHLYAPGKGFSDVSFDIYPGEVLGIVGESGSGKTTLLKSISAR
CCCCCCCCCCCEEHHCCCEEECCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHH
LAPQHGQILYRPQAGQQHDLYAMAESDRRRLLRTDWGVVHQHPLDGLRPQVSAGGNIGER
CCCCCCCEEECCCCCCCCCHHEEHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHH
LMAIGQRHYGDIRRQAGQWLEDVEIPVSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
DEPTGGLDVSVQARLLDLLRTLVVEMQLAAVIVTHDLGVARLLAHRLLVMKQGEVVESGL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCC
TDRVLDDPHHPYTQLLVSSVLS
CHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TSTPLSTTPLLSVTNLTHLYAPGKGFSDVSFDIYPGEVLGIVGESGSGKTTLLKSISAR
CCCCCCCCCCEEHHCCCEEECCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHH
LAPQHGQILYRPQAGQQHDLYAMAESDRRRLLRTDWGVVHQHPLDGLRPQVSAGGNIGER
CCCCCCCEEECCCCCCCCCHHEEHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHH
LMAIGQRHYGDIRRQAGQWLEDVEIPVSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFM
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE
DEPTGGLDVSVQARLLDLLRTLVVEMQLAAVIVTHDLGVARLLAHRLLVMKQGEVVESGL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCC
TDRVLDDPHHPYTQLLVSSVLS
CHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]