| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is tar [H]
Identifier: 157368710
GI number: 157368710
Start: 514537
End: 516090
Strand: Direct
Name: tar [H]
Synonym: Spro_0463
Alternate gene names: 157368710
Gene position: 514537-516090 (Clockwise)
Preceding gene: 157368708
Following gene: 157368712
Centisome position: 9.44
GC content: 58.49
Gene sequence:
>1554_bases ATGCTAAAAAAGATTACGGTCAAGGCCGGGCTGATTGCCTTGCTGAGCCTGATGACGCTGCTGTTGATTATGGTCAGCAC CATCGGCGTCAACGCCATTAACGAAGGGTCGCGATCGTTGCACACCCTCAACCAGATTTTAGGGGAAGAACTGGGGTCGC TGGCCAGTAGCTCCAACCTGACGCTACGCGCCAGAACGGCCGCCTCCTTGGCGGTGCGCCAGCGTGAAATCGGCCAGATC GAGGTATCCGACGCCACTGTGGGGCGCATCTATGATTACCTTGCACAGTCGAAACAGGAAATGGCGCGCTTTGTCAGCGT CGGCACCGTCACCGAACGTGGGCGTGAACTGTCCAGTCGCTTGCAAAACAGTTACCGTGCCTATCTGGAACAGGGCGTCA GACCGATGGCCGACGCCATCAAGGCCGGCAAGGTTGATGACTATTACGACATCCAGGAAACCAAAATCTCTGCCCTGAGC ATCGCTTTCGAAAAGGACCTCAGCGACTTCCGCAGCTTTGCCATGAAGATCGGCCAGCAGCGGGTGAATGAAGCGGAAAG CAATGCCAGCACCAAGATTACCCTGATCCTGATCGCCGGCCTGCTCAGCGTGTTGCTGGCGGTACTGGCCTGGTTCGCGC TGCGGGTGATCATTCTGCGTCCACTCGATGAGTCCATCGCCCAGTTGGAACATATCGCCGGCGGCGACCTGACGCACGAC ATCACCGGCGAAGGGGAAACCGAAATGGGTCGTCTGATCCGCGCGATGCAGCGGATGCAGCAGGCGCTGGTCAGTTCGGT CAGCAAGGTTCGTGATGCCAGCAGCCAAATTGACACCGGCTCACGCGAGCTGGCCGCCGGCAACCTGCATTTGGCGCAGC GCACCGAAGAGTCGGCCGCTTCGCTGGAGGAAACCGCTGCCAGCATGGAACAGCTGACCTCGACGGTGAAAATGAACGCC GAGAATTGCGAGCAGGCCAATCAACTGGCGCTCAGCGTCTCTGATATTGCCAATCAGGGCAGTGAGGTCGTCAGCCAGGT GATGGACAAGATGCAGGCCATTACCGATAGCTCGCGGCGTATCGCCGATATTATCAGCGTGATGGACGGTATTTCCTTCC AGACAAATATTCTGGCGCTGAATGCGGCGGTAGAAGCGGCACGCGCGGGTGAGCAAGGGCGCGGTTTTGCCGTGGTGGCG GGTGAAGTACGCAGCCTGGCTCAGCGCAGCGCACAATCGGCCAAGGAGATAAAAGGGTTGATCGAAGCTTCGCAAAATCG GGTACAGGAAGGCGAGCAGATGGCCGAGTCTGCGGCGAAAACCATGAATGGTATAACCGGTGAGGTAGGGCGTGTGACGG CGTTGATGCGGGAAATTTCTGCGGCAACGCGTGAGCAAAGCAGCGGTATTGAACAGGTCAATCTGGCGGTGGCGCAGATG GATCAGGTGGCGCAGCAAAATGCGGCATTGGTCGAGGAGTCGGCGGCGGCAACGCGCTCGCTGGAGGATCAGGCCCAGTT GTTGGCCCAGAGTATGGCGGCGTTCAAACTATAA
Upstream 100 bases:
>100_bases GCCGATAACTTCATCAAATAATAATGAGTCGGCGAAGTCTGGCTCCGCGTTTTACCTCCTCTACGTTAGAACTCACTATT TCTGAAGCCGGGAAGAACTC
Downstream 100 bases:
>100_bases TGCAGGGGGGCGACAGGCGCCCCCCACATAGAACCGGTTATTCGTCCGGGTTCTCGGCGATAAAGCGCTCGGCGTCTTCC ACCATGGATTTGGTACCGAC
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: MCP-II; Aspartate chemoreceptor protein [H]
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MLKKITVKAGLIALLSLMTLLLIMVSTIGVNAINEGSRSLHTLNQILGEELGSLASSSNLTLRARTAASLAVRQREIGQI EVSDATVGRIYDYLAQSKQEMARFVSVGTVTERGRELSSRLQNSYRAYLEQGVRPMADAIKAGKVDDYYDIQETKISALS IAFEKDLSDFRSFAMKIGQQRVNEAESNASTKITLILIAGLLSVLLAVLAWFALRVIILRPLDESIAQLEHIAGGDLTHD ITGEGETEMGRLIRAMQRMQQALVSSVSKVRDASSQIDTGSRELAAGNLHLAQRTEESAASLEETAASMEQLTSTVKMNA ENCEQANQLALSVSDIANQGSEVVSQVMDKMQAITDSSRRIADIISVMDGISFQTNILALNAAVEAARAGEQGRGFAVVA GEVRSLAQRSAQSAKEIKGLIEASQNRVQEGEQMAESAAKTMNGITGEVGRVTALMREISAATREQSSGIEQVNLAVAQM DQVAQQNAALVEESAAATRSLEDQAQLLAQSMAAFKL
Sequences:
>Translated_517_residues MLKKITVKAGLIALLSLMTLLLIMVSTIGVNAINEGSRSLHTLNQILGEELGSLASSSNLTLRARTAASLAVRQREIGQI EVSDATVGRIYDYLAQSKQEMARFVSVGTVTERGRELSSRLQNSYRAYLEQGVRPMADAIKAGKVDDYYDIQETKISALS IAFEKDLSDFRSFAMKIGQQRVNEAESNASTKITLILIAGLLSVLLAVLAWFALRVIILRPLDESIAQLEHIAGGDLTHD ITGEGETEMGRLIRAMQRMQQALVSSVSKVRDASSQIDTGSRELAAGNLHLAQRTEESAASLEETAASMEQLTSTVKMNA ENCEQANQLALSVSDIANQGSEVVSQVMDKMQAITDSSRRIADIISVMDGISFQTNILALNAAVEAARAGEQGRGFAVVA GEVRSLAQRSAQSAKEIKGLIEASQNRVQEGEQMAESAAKTMNGITGEVGRVTALMREISAATREQSSGIEQVNLAVAQM DQVAQQNAALVEESAAATRSLEDQAQLLAQSMAAFKL >Mature_517_residues MLKKITVKAGLIALLSLMTLLLIMVSTIGVNAINEGSRSLHTLNQILGEELGSLASSSNLTLRARTAASLAVRQREIGQI EVSDATVGRIYDYLAQSKQEMARFVSVGTVTERGRELSSRLQNSYRAYLEQGVRPMADAIKAGKVDDYYDIQETKISALS IAFEKDLSDFRSFAMKIGQQRVNEAESNASTKITLILIAGLLSVLLAVLAWFALRVIILRPLDESIAQLEHIAGGDLTHD ITGEGETEMGRLIRAMQRMQQALVSSVSKVRDASSQIDTGSRELAAGNLHLAQRTEESAASLEETAASMEQLTSTVKMNA ENCEQANQLALSVSDIANQGSEVVSQVMDKMQAITDSSRRIADIISVMDGISFQTNILALNAAVEAARAGEQGRGFAVVA GEVRSLAQRSAQSAKEIKGLIEASQNRVQEGEQMAESAAKTMNGITGEVGRVTALMREISAATREQSSGIEQVNLAVAQM DQVAQQNAALVEESAAATRSLEDQAQLLAQSMAAFKL
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=528, Percent_Identity=43.5606060606061, Blast_Score=338, Evalue=3e-94, Organism=Escherichia coli, GI2367378, Length=528, Percent_Identity=42.2348484848485, Blast_Score=328, Evalue=7e-91, Organism=Escherichia coli, GI1787690, Length=468, Percent_Identity=42.0940170940171, Blast_Score=311, Evalue=5e-86, Organism=Escherichia coli, GI1788194, Length=426, Percent_Identity=44.3661971830986, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI1789453, Length=442, Percent_Identity=32.3529411764706, Blast_Score=202, Evalue=6e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR003122 - InterPro: IPR004091 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 55536; Mature: 55536
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKITVKAGLIALLSLMTLLLIMVSTIGVNAINEGSRSLHTLNQILGEELGSLASSSNL CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCC TLRARTAASLAVRQREIGQIEVSDATVGRIYDYLAQSKQEMARFVSVGTVTERGRELSSR EEEEHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQNSYRAYLEQGVRPMADAIKAGKVDDYYDIQETKISALSIAFEKDLSDFRSFAMKIGQQ HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVNEAESNASTKITLILIAGLLSVLLAVLAWFALRVIILRPLDESIAQLEHIAGGDLTHD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCC ITGEGETEMGRLIRAMQRMQQALVSSVSKVRDASSQIDTGSRELAAGNLHLAQRTEESAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHH SLEETAASMEQLTSTVKMNAENCEQANQLALSVSDIANQGSEVVSQVMDKMQAITDSSRR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH IADIISVMDGISFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQSAKEIKGL HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH IEASQNRVQEGEQMAESAAKTMNGITGEVGRVTALMREISAATREQSSGIEQVNLAVAQM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DQVAQQNAALVEESAAATRSLEDQAQLLAQSMAAFKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKKITVKAGLIALLSLMTLLLIMVSTIGVNAINEGSRSLHTLNQILGEELGSLASSSNL CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCC TLRARTAASLAVRQREIGQIEVSDATVGRIYDYLAQSKQEMARFVSVGTVTERGRELSSR EEEEHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQNSYRAYLEQGVRPMADAIKAGKVDDYYDIQETKISALSIAFEKDLSDFRSFAMKIGQQ HHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVNEAESNASTKITLILIAGLLSVLLAVLAWFALRVIILRPLDESIAQLEHIAGGDLTHD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCC ITGEGETEMGRLIRAMQRMQQALVSSVSKVRDASSQIDTGSRELAAGNLHLAQRTEESAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHH SLEETAASMEQLTSTVKMNAENCEQANQLALSVSDIANQGSEVVSQVMDKMQAITDSSRR HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHH IADIISVMDGISFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQSAKEIKGL HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH IEASQNRVQEGEQMAESAAKTMNGITGEVGRVTALMREISAATREQSSGIEQVNLAVAQM HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DQVAQQNAALVEESAAATRSLEDQAQLLAQSMAAFKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6305515; 9097040; 9278503; 9315712 [H]