| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is sugE [H]
Identifier: 157368662
GI number: 157368662
Start: 463108
End: 463434
Strand: Direct
Name: sugE [H]
Synonym: Spro_0415
Alternate gene names: 157368662
Gene position: 463108-463434 (Clockwise)
Preceding gene: 157368661
Following gene: 157368667
Centisome position: 8.5
GC content: 55.35
Gene sequence:
>327_bases ATGGCTTGGATTATTCTGCTTATTGCCGGTTTGCTTGAAGTAGTGTGGGCTATCGGTTTGAAATACACCCACGGTTTTAC CCGTCTGACCCCCAGCCTTATCACTATTGCCGCCATGGTGGTCAGTATGCTGTTGCTGGCGCATGCCATGAAAACGCTGC CGGCCGGCACGGCCGGCACGGCCTACGCGGTCTGGACCGGTATTGGTGCGGTAGGTGCCGCGATTATGGGGATGGTGCTA CTGGGCGAATCAACCAATATCGCACGCATTCTCAGCCTGTGCCTGATCGTTGTCGGCATACTCGGGCTGAAGTTCAGCAG TCATTAA
Upstream 100 bases:
>100_bases GGCTGCAGGTATAATCTCCGGGCATATCACAACGCTAAACGGGACGACCTGTTTACGCATCTGTATCCGGGGACGACCCC ATAGTAATGGAGCCTGTTTC
Downstream 100 bases:
>100_bases GAGATGTAAAAGGCGGCCAACGGAAGTGGCCGCCAGAAGAGATTTACAGAGTCACTACGCCGATCACGGTCACTACGCTG AGGATGGCAGCCAGGCCGTA
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAWIILLIAGLLEVVWAIGLKYTHGFTRLTPSLITIAAMVVSMLLLAHAMKTLPAGTAGTAYAVWTGIGAVGAAIMGMVL LGESTNIARILSLCLIVVGILGLKFSSH
Sequences:
>Translated_108_residues MAWIILLIAGLLEVVWAIGLKYTHGFTRLTPSLITIAAMVVSMLLLAHAMKTLPAGTAGTAYAVWTGIGAVGAAIMGMVL LGESTNIARILSLCLIVVGILGLKFSSH >Mature_107_residues AWIILLIAGLLEVVWAIGLKYTHGFTRLTPSLITIAAMVVSMLLLAHAMKTLPAGTAGTAYAVWTGIGAVGAAIMGMVLL GESTNIARILSLCLIVVGILGLKFSSH
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=108, Percent_Identity=75, Blast_Score=152, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11233; Mature: 11102
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWIILLIAGLLEVVWAIGLKYTHGFTRLTPSLITIAAMVVSMLLLAHAMKTLPAGTAGT CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AYAVWTGIGAVGAAIMGMVLLGESTNIARILSLCLIVVGILGLKFSSH HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AWIILLIAGLLEVVWAIGLKYTHGFTRLTPSLITIAAMVVSMLLLAHAMKTLPAGTAGT HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH AYAVWTGIGAVGAAIMGMVLLGESTNIARILSLCLIVVGILGLKFSSH HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA