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The map label for this gene is dcyD [H]

Identifier: 157157688

GI number: 157157688

Start: 2125271

End: 2126299

Strand: Reverse

Name: dcyD [H]

Synonym: EcE24377A_2153

Alternate gene names: 157157688

Gene position: 2126299-2125271 (Counterclockwise)

Preceding gene: 157156974

Following gene: 157157239

Centisome position: 42.7

GC content: 53.74

Gene sequence:

>1029_bases
ATGCCACTGCATAATTTAACCCGTTTTCCACGGTTGGAGTTTATCGGCGCGCCAACGCCGCTCGAATATCTGCCGCGCTT
TTCTGATTATCTTGGACGGGAAATTTTCATCAAACGGGATGACGTCACCCCCATGGCAATGGGCGGCAATAAATTACGTA
AGCTGGAATTTCTCGCAGCAGATGCTCTGCGCGAAGGTGCCGATACGCTGATTACTGCCGGCGCGATCCAGTCTAACCAT
GTGCGCCAGACTGCCGCAGTTGCGGCGAAACTCGGTCTGCACTGCGTGGCGCTGCTGGAAAATCCTATTGGCACAACCGC
AGAAAACTATTTAACCAACGGCAATCGCTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGCGACGCACTGACCG
ATCCCAATGCCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGT
TCTAATGCTCTGGGCGCGCTGGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTC
GTCGGTGGTGGTCGCATCGGGCAGTGCCGGAACTCACGCCGGATTGGCTGTTGGGCTGGAACACCTGATGCCTGAAAGCG
AACTGATTGGCGTGACCGTGTCGCGTTCCGTTGCCGATCAATTGCCGAAAGTGGTTAACCTACAACAGGCGATTGCGAAA
GAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGACGA
AGGCATGGAAGCAGTGAAATTGCTGGCGCGTCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGG
GGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTCTGTTTATTCATACCGGCGGCGCGCCTGCG
CTGTTCGCCTATCATCCCACGTTTAGCTCCGGGAACGCTCATGCAAGAAAGTATACAACTGGTTATTGA

Upstream 100 bases:

>100_bases
CATAATGACAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAAC
AACACACATCGGAGGCTGTT

Downstream 100 bases:

>100_bases
TTCCTTGCCGTTCCTGTTGAAAGGGGCTGGGTATACCCTGCAACTCAGTATCGGCGGCATGTTTTTTGGCTTACTACTCG
GGTTTATTCTCGCGCTGATG

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPA
LFAYHPTFSSGNAHARKYTTGY

Sequences:

>Translated_342_residues
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPA
LFAYHPTFSSGNAHARKYTTGY
>Mature_341_residues
PLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHV
RQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGS
NALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKE
LELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPAL
FAYHPTFSSGNAHARKYTTGY

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=326, Percent_Identity=100, Blast_Score=662, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 36660; Mature: 36529

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHH
DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD
HHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEE
LFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDEGPILFIHTGGAPALFAYHPTFSSGNAHARKYTTGY
HHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEECCCC
>Mature Secondary Structure 
PLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTPMAMGGNKLRKLEFLAA
CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCHHHHHHHHHH
DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD
HHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEE
LFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDEGPILFIHTGGAPALFAYHPTFSSGNAHARKYTTGY
HHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA