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The map label for this gene is yhdL

Identifier: 157162765

GI number: 157162765

Start: 3482774

End: 3482992

Strand: Reverse

Name: yhdL

Synonym: EcHS_A3485

Alternate gene names: 157162765

Gene position: 3482992-3482774 (Counterclockwise)

Preceding gene: 157162766

Following gene: 157162759

Centisome position: 75.01

GC content: 43.38

Gene sequence:

>219_bases
ATGAGTCGATATCAGCATACTAAAGGGCAGATAAAGGATAATGCGATAGAAGCATTACTACATGATCCCTTATTCCGACA
GCGCGTAGAGAAAAATAAGAAGGGGAAAGGCAGTTACATGCGAAAAGGAAAACATGGCAATCGGGGGAACTGGGAGGCCA
GTGGCAAGAAAGTAAATCACTTTTTTACCACTGGTCTTCTGCTTTCAGGCGCTTGTTAA

Upstream 100 bases:

>100_bases
GAAGCTCTTGAACAAGGGGCGAGTGGCGTTAAGAGTGGTTGTTGATTTTTTGCACTGGCAGGATTACACTCGCGCCGTTA
AATAACCAACTGGAGTTTTT

Downstream 100 bases:

>100_bases
GAGCGGTTATTCTGCTCTTTCAGCAAATCACGAATTTCTGTCAGTAATACTTCTTCTTTAGTTGGTGCAGGTGCGGCTGC
TGGTTCTTCTTTTTTCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNHFFTTGLLLSGAC

Sequences:

>Translated_72_residues
MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNHFFTTGLLLSGAC
>Mature_71_residues
SRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNHFFTTGLLLSGAC

Specific function: Unknown

COG id: COG3036

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0235

Homologues:

Organism=Escherichia coli, GI87082241, Length=72, Percent_Identity=100, Blast_Score=151, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDL_ECOLI (P36675)

Other databases:

- EMBL:   L29458
- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   I67891
- RefSeq:   AP_004499.1
- RefSeq:   YP_588467.1
- ProteinModelPortal:   P36675
- STRING:   P36675
- EnsemblBacteria:   EBESCT00000001173
- EnsemblBacteria:   EBESCT00000016985
- GeneID:   1450289
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3253
- KEGG:   eco:b4550
- EchoBASE:   EB1911
- EcoGene:   EG11968
- eggNOG:   COG3036
- GeneTree:   EBGT00050000011146
- HOGENOM:   HBG303777
- OMA:   GSYRRKD
- ProtClustDB:   CLSK888422
- BioCyc:   EcoCyc:MONOMER0-2687
- Genevestigator:   P36675
- InterPro:   IPR005589

Pfam domain/function: PF03889 DUF331

EC number: NA

Molecular weight: Translated: 8172; Mature: 8040

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNH
CCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
FFTTGLLLSGAC
HHHHHHHHCCCC
>Mature Secondary Structure 
SRYQHTKGQIKDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGKHGNRGNWEASGKKVNH
CCCCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
FFTTGLLLSGAC
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503