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The map label for this gene is yhdT

Identifier: 157162737

GI number: 157162737

Start: 3451718

End: 3451960

Strand: Direct

Name: yhdT

Synonym: EcHS_A3449

Alternate gene names: 157162737

Gene position: 3451718-3451960 (Clockwise)

Preceding gene: 157162736

Following gene: 157162738

Centisome position: 74.33

GC content: 54.32

Gene sequence:

>243_bases
ATGGACACTCGTTTTGTTCAGGCCCATAAAGAGGCGCGCTGGGCGCTGGGGCTGACCCTTTTGTATCTGGCAGTTTGGTT
AGTAGCCGCTTACTTATCTGGCGTTGCCCCCGGTTTTACCGGCTTTCCGCGCTGGTTTGAGATGGCCTGCATCCTGACGC
CGCTGCTGTTTATTGGACTGTGCTGGGCGATGGTGAAATTTATCTATCGCGATATCCCACTGGAGGATGACGATGCAGCT
TGA

Upstream 100 bases:

>100_bases
AAGCGTCAAAAGGCCGGATTTTCCGGCCTTTTTTATTACTGGGGATCGACAACCCCCATAAGGTACAATCCCCGCTTTCT
TCACCCATCAGGGACAAAAA

Downstream 100 bases:

>100_bases
AGTAATTCTACCGCTGGTCGCCTATCTGGTGGTGGTGTTCGGTATCTCGGTTTATGCGATGCGTAAACGGAGCACCGGCA
CCTTCCTTAATGAGTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA

Sequences:

>Translated_80_residues
MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA
>Mature_80_residues
MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA

Specific function: Unknown

COG id: COG3924

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0974B

Homologues:

Organism=Escherichia coli, GI1789655, Length=80, Percent_Identity=100, Blast_Score=164, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDT_ECOLI (P45566)

Other databases:

- EMBL:   M30953
- EMBL:   M83198
- EMBL:   U18997
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   C65118
- RefSeq:   AP_003797.1
- RefSeq:   NP_417723.1
- STRING:   P45566
- EnsemblBacteria:   EBESCT00000001153
- EnsemblBacteria:   EBESCT00000016092
- GeneID:   947762
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3225
- KEGG:   eco:b3257
- EchoBASE:   EB2680
- EcoGene:   EG12831
- eggNOG:   COG3924
- GeneTree:   EBGT00050000010758
- HOGENOM:   HBG758375
- OMA:   KRFVQAH
- ProtClustDB:   PRK10633
- BioCyc:   EcoCyc:G7693-MONOMER
- Genevestigator:   P45566
- InterPro:   IPR010398
- ProDom:   PD745092

Pfam domain/function: PF06196 DUF997

EC number: NA

Molecular weight: Translated: 9098; Mature: 9098

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13e7d460)-; HASH(0x15f93360)-;

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
CWAMVKFIYRDIPLEDDDAA
HHHHHHHHHHHCCCCCCCCH
>Mature Secondary Structure
MDTRFVQAHKEARWALGLTLLYLAVWLVAAYLSGVAPGFTGFPRWFEMACILTPLLFIGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
CWAMVKFIYRDIPLEDDDAA
HHHHHHHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2193919; 9278503