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The map label for this gene is yqjI

Identifier: 157162546

GI number: 157162546

Start: 3260223

End: 3260846

Strand: Direct

Name: yqjI

Synonym: EcHS_A3252

Alternate gene names: 157162546

Gene position: 3260223-3260846 (Clockwise)

Preceding gene: 157162543

Following gene: 157162549

Centisome position: 70.21

GC content: 53.85

Gene sequence:

>624_bases
ATGAGCCATCATCACGAAGGGTGTTGTAAACATGAAGGCCAGCCACGCCATGAGGGCTGCTGCAAAGGTGAGAAGTCAGA
ACACGAGCACTGCGGACACGGTCACCAGCATGAACACGGTCAATGCTGCGGTGGTCGCCACGGTCGCGGCGGCGGTCGTC
GGCAACGTTTCTTTGGTCACGGTGAATTGCGTCTGGTGATTCTGGATATTCTCTCGCGCGATGACAGCCACGGTTACGAA
TTGATTAAAGCGATTGAGAATCTAACCCAGGGGAATTACACCCCAAGCCCGGGCGTCATCTACCCAACGCTGGATTTTCT
GCAGGAGCAGTCGCTGATTACCATCCGCGAAGAGGAAGGAGGTAAGAAGCAGATTGCGCTGACCGAACAAGGCGCGCAGT
GGCTGGAAGAAAACCGCGAACAGGTGGAGATGATTGAAGAACGCATCAAAGCGCGTTGCGTTGGCGCGGCGCTGCGCCAG
AACCCGCAAATGAAGCGGGCGCTGGATAATTTTAAAGCGGTGCTGGATTTACGCGTCAACCAGAGCGATATCAGTGATGC
ACAAATAAAAAAGATCATTGCGGTGATCGACCGCGCCGCTTTTGATATTACGCAACTGGATTAA

Upstream 100 bases:

>100_bases
ATGTTGAGTAAACCTGCGTTTAAAAATCATTTTTGTACTTGCAGTAATACTTATATCAGATATAAATTAGATATATCTAA
TTAAGCAAAAGGAGGCTGAT

Downstream 100 bases:

>100_bases
TCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACA
CCCCGCAGGCCTGATAAGAT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYE
LIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD

Sequences:

>Translated_207_residues
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYE
LIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD
>Mature_206_residues
SHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYEL
IKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQN
PQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=207, Percent_Identity=100, Blast_Score=424, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJI_ECOLI (P64588)

Other databases:

- EMBL:   U28379
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65095
- RefSeq:   AP_003620.1
- RefSeq:   NP_417542.1
- ProteinModelPortal:   P64588
- SMR:   P64588
- DIP:   DIP-48127N
- MINT:   MINT-1269480
- STRING:   P64588
- EnsemblBacteria:   EBESCT00000002342
- EnsemblBacteria:   EBESCT00000016834
- GeneID:   947584
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3042
- KEGG:   eco:b3071
- EchoBASE:   EB2788
- EcoGene:   EG12954
- eggNOG:   COG1695
- GeneTree:   EBGT00050000008916
- HOGENOM:   HBG727779
- OMA:   IGIIDRA
- ProtClustDB:   CLSK880568
- BioCyc:   EcoCyc:G7594-MONOMER
- Genevestigator:   P64588
- InterPro:   IPR005149
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF03551 PadR

EC number: NA

Molecular weight: Translated: 23402; Mature: 23270

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH
CCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCEEEEECCCC
GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
QSDISDAQIKKIIAVIDRAAFDITQLD
CCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRGGGRRQRFFGH
CCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYPTLDFLQEQSLITIREEEG
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCEEEEECCCC
GKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQNPQMKRALDNFKAVLDLRVN
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
QSDISDAQIKKIIAVIDRAAFDITQLD
CCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503