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The map label for this gene is trbJ

Identifier: 157161971

GI number: 157161971

Start: 2660524

End: 2661318

Strand: Reverse

Name: trbJ

Synonym: EcHS_A2647

Alternate gene names: NA

Gene position: 2661318-2660524 (Counterclockwise)

Preceding gene: 157161972

Following gene: 157161970

Centisome position: 57.31

GC content: 46.04

Gene sequence:

>795_bases
ATGAATTTAATGTTCCGAGTGGTTTCATTACAAAGAGGGATTTTAGCCGCTAAAAAAGCTTTAATAGTTCCTTTCGTGGC
GTCCGTCATGGCATTACCGGTGAAGGCCGGAATTCCCGTTATTGATGGCACTAATGTGGTTCAGACCACAATCAGTGCAG
TTAACAATGTTCAGGCTGTGACTAAACAAATCCAGCAGTACCAGACGCAGCTGCAGCAGTATGAAAACATGCTGCAGAAC
ACCGTAGCTCCTGCGGCCTATATCTGGGATCAGGCAAATTCAACAATTAATAAATTGTTGCAGGTGCAGGATACCCTTAA
TTACTACAAGAATCAGGCCGGGAGTCTCGATGCGTACCTGAAACGATATCAGGATGTTAATTACTACAGGACATCACCTT
GCTTTAACAGCAATGTTGAATGTACCGCGTCTGAAATTAGTGCACTGCGTGAAGCTGAACAGAACAGCTCAGAGGCGCGT
AAAAAGGCTAATGACGCAGTATTTAAGGTAATTGACGAACAGCAGAACACCCTGCAGAGCGATGCTGATAATCTTGCCGA
ATTACAAACTCAGGCAAGCGGCGCACAAGGGCAAATGGAAGCTATTCAGGCGGCAAACCAGCTTGCCAGTGCACAGACAA
ATCAGTTACTGCAAATCCGCTCACTTCTGGTAGCCCAACAAAACGCTGTAGCAACACTGGCACAGGCTCAGGCAGATAAA
GAATCACAACAGATAGCCGCTGATGAAAAAGCGTTAGCTGGAGAGAATACACCAAGCCCGAAGCGAATTTGGTGA

Upstream 100 bases:

>100_bases
TAAAATCTTGGATAAATAAATGTGTGGTTTCCTATATACCTGAGTCTGTTAACAGACAGTGTGTTGAATATTACTGAACT
GATGAAAAAGAGGTGAGCAA

Downstream 100 bases:

>100_bases
GGAACAACTGAATGAAAAATAAAATTATGATGGTTTTTATTCTAATCATTTCAATGATTATATGTTCTTGCGAAAAAAAC
GATAACGATTGCTTATCGAC

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: TrbJ Protein Of DNA Transfer System; Conjugative Transfer Protein TrbJ; Conjugal Transfer Protein; TrbJ Protein; Mating Pair Formation Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNLMFRVVSLQRGILAAKKALIVPFVASVMALPVKAGIPVIDGTNVVQTTISAVNNVQAVTKQIQQYQTQLQQYENMLQN
TVAPAAYIWDQANSTINKLLQVQDTLNYYKNQAGSLDAYLKRYQDVNYYRTSPCFNSNVECTASEISALREAEQNSSEAR
KKANDAVFKVIDEQQNTLQSDADNLAELQTQASGAQGQMEAIQAANQLASAQTNQLLQIRSLLVAQQNAVATLAQAQADK
ESQQIAADEKALAGENTPSPKRIW

Sequences:

>Translated_264_residues
MNLMFRVVSLQRGILAAKKALIVPFVASVMALPVKAGIPVIDGTNVVQTTISAVNNVQAVTKQIQQYQTQLQQYENMLQN
TVAPAAYIWDQANSTINKLLQVQDTLNYYKNQAGSLDAYLKRYQDVNYYRTSPCFNSNVECTASEISALREAEQNSSEAR
KKANDAVFKVIDEQQNTLQSDADNLAELQTQASGAQGQMEAIQAANQLASAQTNQLLQIRSLLVAQQNAVATLAQAQADK
ESQQIAADEKALAGENTPSPKRIW
>Mature_264_residues
MNLMFRVVSLQRGILAAKKALIVPFVASVMALPVKAGIPVIDGTNVVQTTISAVNNVQAVTKQIQQYQTQLQQYENMLQN
TVAPAAYIWDQANSTINKLLQVQDTLNYYKNQAGSLDAYLKRYQDVNYYRTSPCFNSNVECTASEISALREAEQNSSEAR
KKANDAVFKVIDEQQNTLQSDADNLAELQTQASGAQGQMEAIQAANQLASAQTNQLLQIRSLLVAQQNAVATLAQAQADK
ESQQIAADEKALAGENTPSPKRIW

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28940; Mature: 28940

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNLMFRVVSLQRGILAAKKALIVPFVASVMALPVKAGIPVIDGTNVVQTTISAVNNVQAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
TKQIQQYQTQLQQYENMLQNTVAPAAYIWDQANSTINKLLQVQDTLNYYKNQAGSLDAYL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KRYQDVNYYRTSPCFNSNVECTASEISALREAEQNSSEARKKANDAVFKVIDEQQNTLQS
HHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
DADNLAELQTQASGAQGQMEAIQAANQLASAQTNQLLQIRSLLVAQQNAVATLAQAQADK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESQQIAADEKALAGENTPSPKRIW
HHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA