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The map label for this gene is trbL [H]

Identifier: 157161970

GI number: 157161970

Start: 2658945

End: 2660336

Strand: Reverse

Name: trbL [H]

Synonym: EcHS_A2646

Alternate gene names: 157161970

Gene position: 2660336-2658945 (Counterclockwise)

Preceding gene: 157161971

Following gene: 157161969

Centisome position: 57.29

GC content: 44.54

Gene sequence:

>1392_bases
ATGAAAATAGTAAGTAAGCTCACCTTTTTAGGTATCATTCTTTTCTTTTCTATAAATGCCTATGCTGGTCAATTAGATAG
TAGCGGGCTACTTGATACTTTATTAGATAAGTTTCAACAAGTAGCCAGTACATGGACAACAGTAATTGCTGACTATGCAA
ATTGGCTCTTCTGGGGGCTGGTATTAATAAGTATGGTTTGGACATTTGGTATGATGGCGATGCAAGGGGAAGGGTTGACA
GGCGTACTTGCTGAAATAGTTCGCTTTTTTGCTGTCATTGGTTTTTTTTATTATCTTTTAATCAACGGCCCATCCATATC
GCAATCCATCATTAATTCAATGAGACAACTTGCAGCAAACGCGTTAGGAATAAGTACTGGTATTTCGCCCTCAAGCATAG
TTGATATGGCGTTTGCGATATTAACAAAGGTCAGTTCAGCCGCATCAATTTGGTCGCCAATGATATCCACCATTATGATA
ACAGTCGCGATAATCGTTTTGGTAGTAATGTCCCTTATAGCGATAAATATGCTAATCATGTTGGTTTCTGCATGGGTACT
ATGTTATGCAGGAGTTATATTGCTTGGGTTTGGTGGTTCGAAATGGACCTCTGACATAGCAATTAATTACTTACGAACTG
TTTTATCGGTTGGCATTCAATTATTCACGATGACATTAATTATTGGGATTGGACAATCATTTATAGATCAATATTTTTCT
CTTATTAAAGATGATGTTCCTGATCTTAATAGTCTTATCGTTTTGCTTCTGGCGTCAATTATCCTGTTAGTGTTAACGAA
TAAGCTACCACTGTTGTTATCAGGTGTTGTAGGAGGGGCTTCTTTACAAGGGATTGGTGGATTTGGGGCGGGTATGATTA
CCGGCGCTGCCGCTACTGCCATCAGCGGTGCTGGAGCGATGGCAATGGGGGCATCAGCTCAAGTCAGCGGCGGAGCCTCT
GCATTGAAGGCAGCGTTCGAGTCTGCGCAAGCTGCCATGGCCGAAGAATCTGGTTCAGGCGTTGGAGGCGGTTCCGGTGG
AGGATTTGGCGGCGGGGAAGATACCGGTTCTGTAGATACTTCTTGCGGCCAACCCTCAGGCGGTTCCGGTGGTTCGTCTG
CTGGGAGCAGTTCAGGTAGCGCCAGCGGAGGAAGTCAGGGGTTTGCTTCATTCTCACGAGCTGGGCGCATGGCAAGCCAT
ATGGGAAGCAGTATGGCTAACGGAGCTGCTGAATACCAGACAATGAGGCGAAGTAGCGATTCTTCTCGTGTCCAACGGAC
TATTGGAGGGGAGTTGGCGACTCAGATACGTAAACAAACAGCTACTCGTCGGGATAACCGCGAACATGATGATTTTGTCG
AAGATAGCTTATCCGGCAATAATAAATCTTGA

Upstream 100 bases:

>100_bases
ATTGCTTATCGACGGCAGAGAATAAATTTTATGCACATAGATCCGATAAGTGTGCATTGCGTAGTAATAACAATCCAAGC
CCTAAACGAGAATGGTAATC

Downstream 100 bases:

>100_bases
ATCAAGCGCGTCAGTTTATGGGGGAGCGGGAGCTGACGCTTCAACTGAGCGAACTTTATTTCTGCAACTCAAAGGAAAAA
ATATGTCCAGAACTCCAGAT

Product: P-type conjugative transfer protein TrbL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MKIVSKLTFLGIILFFSINAYAGQLDSSGLLDTLLDKFQQVASTWTTVIADYANWLFWGLVLISMVWTFGMMAMQGEGLT
GVLAEIVRFFAVIGFFYYLLINGPSISQSIINSMRQLAANALGISTGISPSSIVDMAFAILTKVSSAASIWSPMISTIMI
TVAIIVLVVMSLIAINMLIMLVSAWVLCYAGVILLGFGGSKWTSDIAINYLRTVLSVGIQLFTMTLIIGIGQSFIDQYFS
LIKDDVPDLNSLIVLLLASIILLVLTNKLPLLLSGVVGGASLQGIGGFGAGMITGAAATAISGAGAMAMGASAQVSGGAS
ALKAAFESAQAAMAEESGSGVGGGSGGGFGGGEDTGSVDTSCGQPSGGSGGSSAGSSSGSASGGSQGFASFSRAGRMASH
MGSSMANGAAEYQTMRRSSDSSRVQRTIGGELATQIRKQTATRRDNREHDDFVEDSLSGNNKS

Sequences:

>Translated_463_residues
MKIVSKLTFLGIILFFSINAYAGQLDSSGLLDTLLDKFQQVASTWTTVIADYANWLFWGLVLISMVWTFGMMAMQGEGLT
GVLAEIVRFFAVIGFFYYLLINGPSISQSIINSMRQLAANALGISTGISPSSIVDMAFAILTKVSSAASIWSPMISTIMI
TVAIIVLVVMSLIAINMLIMLVSAWVLCYAGVILLGFGGSKWTSDIAINYLRTVLSVGIQLFTMTLIIGIGQSFIDQYFS
LIKDDVPDLNSLIVLLLASIILLVLTNKLPLLLSGVVGGASLQGIGGFGAGMITGAAATAISGAGAMAMGASAQVSGGAS
ALKAAFESAQAAMAEESGSGVGGGSGGGFGGGEDTGSVDTSCGQPSGGSGGSSAGSSSGSASGGSQGFASFSRAGRMASH
MGSSMANGAAEYQTMRRSSDSSRVQRTIGGELATQIRKQTATRRDNREHDDFVEDSLSGNNKS
>Mature_463_residues
MKIVSKLTFLGIILFFSINAYAGQLDSSGLLDTLLDKFQQVASTWTTVIADYANWLFWGLVLISMVWTFGMMAMQGEGLT
GVLAEIVRFFAVIGFFYYLLINGPSISQSIINSMRQLAANALGISTGISPSSIVDMAFAILTKVSSAASIWSPMISTIMI
TVAIIVLVVMSLIAINMLIMLVSAWVLCYAGVILLGFGGSKWTSDIAINYLRTVLSVGIQLFTMTLIIGIGQSFIDQYFS
LIKDDVPDLNSLIVLLLASIILLVLTNKLPLLLSGVVGGASLQGIGGFGAGMITGAAATAISGAGAMAMGASAQVSGGAS
ALKAAFESAQAAMAEESGSGVGGGSGGGFGGGEDTGSVDTSCGQPSGGSGGSSAGSSSGSASGGSQGFASFSRAGRMASH
MGSSMANGAAEYQTMRRSSDSSRVQRTIGGELATQIRKQTATRRDNREHDDFVEDSLSGNNKS

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 47680; Mature: 47680

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]