Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is yfbT
Identifier: 157161781
GI number: 157161781
Start: 2453010
End: 2453660
Strand: Reverse
Name: yfbT
Synonym: EcHS_A2442
Alternate gene names: 157161781
Gene position: 2453660-2453010 (Counterclockwise)
Preceding gene: 157161782
Following gene: 157161780
Centisome position: 52.84
GC content: 56.53
Gene sequence:
>651_bases GTGCGGTGCAAAGGTTTTCTGTTTGATCTTGATGGAACGCTGGTGGATTCCCTGCCTGCGGTAGAACGGGCGTGGAGCAA CTGGGCCAGACGTCATGGGTTAGCGCCGGAAGAGGTGCTGGCTTTCATTCACGGTAAACAGGCGATCACCTCTCTGCGCC ATTTTATGGCGGGCAAATCCGAGGCTGATATTGCCGCCGAGTTTACGCGTCTGGAGCACATCGAGGCCACGGAAACCGAA GGTATTACCGCGCTTCCGGGGGCAATCGCCTTACTCAGTCATTTGAATAAAGCAGGTATTCCGTGGGCCATTGTGACTTC TGGCTCCATGCCGGTAGCGCGAGCGCGCCATAAAATAGCTGGGCTTCCCGCACCAGAGGTGTTTGTAACCGCTGAGCGAG TGAAGCGCGGAAAACCAGAACCTGATGCGTATCTGTTAGGCGCGCAGCTGCTGGGGCTTGCGCCGCAGGAGTGTGTGGTG GTGGAAGATGCTCCCGCTGGCGTGCTTTCTGGCCTGGCGGCGGGTTGTCATGTCATTGCGGTTAACGCTCCGGCAGATAC CCCGCGCCTGAATGAGGTCGATTTGGTCCTCCACAGTCTGGAGCAAATTACTGTGACCAAACAGCCAAATGGCGATGTTA TTATTCAGTGA
Upstream 100 bases:
>100_bases AAATATCAGCGCATGCTTAATGTGTGGCATGCCTGCCCGCGTCAGTACCATTTGAGCGCCAACGAAATTAATCAAATTAT CAATGCCTGAGGAGGCCCGC
Downstream 100 bases:
>100_bases AACACCTGATCATGATTTAGCCCCGTCTCGTCGGGGCTTTTTTATGGCAGAATCAAGTCATCCCCCTCAATTAACAAGGA TAAGTTGTGAACGGTGAATT
Product: putative phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETE GITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ
Sequences:
>Translated_216_residues MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETE GITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ >Mature_216_residues MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKSEADIAAEFTRLEHIEATETE GITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV VEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family
Homologues:
Organism=Homo sapiens, GI197382691, Length=212, Percent_Identity=30.188679245283, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI207113149, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=9e-13, Organism=Escherichia coli, GI87082080, Length=216, Percent_Identity=100, Blast_Score=436, Evalue=1e-124, Organism=Escherichia coli, GI1790151, Length=202, Percent_Identity=31.1881188118812, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789046, Length=192, Percent_Identity=30.2083333333333, Blast_Score=69, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321834, Length=229, Percent_Identity=32.3144104803493, Blast_Score=107, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321833, Length=229, Percent_Identity=31.8777292576419, Blast_Score=107, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6322136, Length=225, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320905, Length=225, Percent_Identity=31.1111111111111, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI20129151, Length=195, Percent_Identity=28.7179487179487, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YFBT_ECOLI (P77625)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: C65001 - RefSeq: AP_002893.1 - RefSeq: NP_416796.2 - ProteinModelPortal: P77625 - SMR: P77625 - DIP: DIP-11972N - MINT: MINT-1275778 - STRING: P77625 - EnsemblBacteria: EBESCT00000000977 - EnsemblBacteria: EBESCT00000018371 - GeneID: 946777 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW5376 - KEGG: eco:b2293 - EchoBASE: EB3857 - EcoGene: EG14104 - eggNOG: COG0637 - GeneTree: EBGT00050000009692 - HOGENOM: HBG742904 - OMA: VVERSWC - ProtClustDB: PRK11587 - BioCyc: EcoCyc:G7187-MONOMER - BioCyc: MetaCyc:G7187-MONOMER - Genevestigator: P77625 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 - Gene3D: G3DSA:3.40.50.1000 - Gene3D: G3DSA:1.10.150.240 - PRINTS: PR00413 - TIGRFAMs: TIGR01549 - TIGRFAMs: TIGR01509
Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784
EC number: NA
Molecular weight: Translated: 23008; Mature: 23008
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: ACT_SITE 9-9
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKS CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EADIAAEFTRLEHIEATETEGITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIA CHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA CCCCCHHEEEHHHHHCCCCCCCCEEHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEE VNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ EECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEC >Mature Secondary Structure MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKS CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EADIAAEFTRLEHIEATETEGITALPGAIALLSHLNKAGIPWAIVTSGSMPVARARHKIA CHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHC GLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIA CCCCCHHEEEHHHHHCCCCCCCCEEHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEE VNAPADTPRLNEVDLVLHSLEQITVTKQPNGDVIIQ EECCCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123