Click here to switch to the map view.

The map label for this gene is yfbV

Identifier: 157161782

GI number: 157161782

Start: 2454248

End: 2454703

Strand: Reverse

Name: yfbV

Synonym: EcHS_A2444

Alternate gene names: 157161782

Gene position: 2454703-2454248 (Counterclockwise)

Preceding gene: 157161783

Following gene: 157161781

Centisome position: 52.86

GC content: 50.88

Gene sequence:

>456_bases
ATGTCAACGCCGGATAATCGTTCTGTTAATTTTTTTAGCTTGTTTCGCCGGGGACAGCATTACTCAAAGACGTGGCCGCT
GGAAAAACGCCTTGCCCCGGTCTTTGTCGAAAATCGCGTTATCAAGATGACGCGTTATGCGATCCGTTTTATGCCGCCGA
TCGCCGTATTTACTCTCTGCTGGCAGATTGCCCTGGGCGGTCAGCTTGGGCCGGCAGTTGCCACTGCCCTGTTCGCCTTA
AGTTTACCCATGCAGGGATTGTGGTGGCTGGGCAAGCGTTCTGTCACGCCATTACCCCCTGCAATCCTTAACTGGTTTTA
TGAAGTTCGCGGTAAATTGCAGGAGTCTGGACAGGTGTTGGCACCCGTTGAAGGCAAGCCTGATTACCAGGCATTAGCTG
ACACGCTTAAGCGCGCCTTCAAACAACTGGATAAAACTTTCCTTGATGATTTGTAA

Upstream 100 bases:

>100_bases
TGATAGTGGGTATGGAAGACAAAATGTTTTGAACGTTGTCCCGCTGAGTTGTGAATTTGCACAAATTTTTGAATCTTTAT
ATGTGAAGTTGAGGTGAAGC

Downstream 100 bases:

>100_bases
TTGACCCCTGATTACGCATATAAAAGAAGGCATACTCAGCCTTCTTTTTTTTCACCGTAGTAGAGTGATACAGGAGTCAA
CAATGGAAATGACCAACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFAL
SLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL

Sequences:

>Translated_151_residues
MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFAL
SLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL
>Mature_150_residues
STPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALS
LPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family

Homologues:

Organism=Escherichia coli, GI1788632, Length=151, Percent_Identity=100, Blast_Score=310, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFBV_ECO24 (A7ZPA9)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001463638.1
- ProteinModelPortal:   A7ZPA9
- STRING:   A7ZPA9
- EnsemblBacteria:   EBESCT00000020139
- GeneID:   5588036
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_2588
- eggNOG:   COG3092
- GeneTree:   EBGT00050000009425
- HOGENOM:   HBG297010
- OMA:   FACSLPM
- ProtClustDB:   PRK01816
- BioCyc:   ECOL331111:ECE24377A_2588-MONOMER
- HAMAP:   MF_01101
- InterPro:   IPR007334

Pfam domain/function: PF04217 DUF412

EC number: NA

Molecular weight: Translated: 17213; Mature: 17082

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13bd1ea8)-; HASH(0x15e91588)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLC
CCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVL
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
APVEGKPDYQALADTLKRAFKQLDKTFLDDL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
STPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMTRYAIRFMPPIAVFTLC
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
WQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAILNWFYEVRGKLQESGQVL
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEE
APVEGKPDYQALADTLKRAFKQLDKTFLDDL
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA