Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is pgmB
Identifier: 157160828
GI number: 157160828
Start: 1427598
End: 1428257
Strand: Direct
Name: pgmB
Synonym: EcHS_A1432
Alternate gene names: 157160828
Gene position: 1427598-1428257 (Clockwise)
Preceding gene: 157160827
Following gene: 157160829
Centisome position: 30.74
GC content: 56.52
Gene sequence:
>660_bases ATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCA GATTGCCGCTGAAATTGGCATCAGCATTGATGCGCAGTTTAACGAATCCCTAAAAGGGATCAGCCGCGATGAGTCTCTGC GGCGCATTCTGCAACACGGGGGCAAAGAGGGCGACTTTAACTCGCAGGAGAGGGCGCAACTGGCGTATCGCAAAAATCTG CTCTATGTCCACTCACTACGCGAGTTGACGGTCAACGCTGTTCTACCCGGCATTCGCTCTTTGCTGGCAGATCTCCGTGC ACAGCAGATCTCGGTTGGGCTGGCTTCTGTCTCCCTGAATGCGCCGACGATTTTAGCGGCGCTGGAGCTGCGCGAGTTTT TCACCTTCTGCGCGGATGCTTCCCAACTTAAAAACTCGAAACCGGACCCGGAAATCTTTCTCGCCGCCTGTGCAGGGCTG GGCGTGCCGCCGCAGGCATGTATCGGCATTGAAGATGCGCAGGCGGGCATTGACGCCATTAACGCCAGCGGTATGCGCTC GGTGGGGATCGGCGCGGGCTTAACCGGGGCGCAATTACTGTTGCCTTCAACGGAATCACTCACCTGGCCGCGGTTATCGG CCTTCTGGCAAAACGTATAG
Upstream 100 bases:
>100_bases TGAACGGTCAGCTTATAACCGTGGCTGAAGAATCTGTTTTCTGTTTGGGTGATTTTATTTTGCCCTTCAATGGGACCGCT ACCAAACATCAGGGGGATGA
Downstream 100 bases:
>100_bases CAAAGGAATCAACATGGCTCAGTTTTCGTTACAACATATTCAAAAAATCTACGATAACCAGGTGCATGTGGTGAAGGACT TCAACCTGGAAATTGCCGAT
Product: putative beta-phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNL LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
Sequences:
>Translated_219_residues MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNL LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV >Mature_219_residues MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNL LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGL GVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family
Homologues:
Organism=Homo sapiens, GI197382691, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787576, Length=219, Percent_Identity=100, Blast_Score=444, Evalue=1e-126, Organism=Escherichia coli, GI1789046, Length=191, Percent_Identity=29.3193717277487, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788021, Length=189, Percent_Identity=31.2169312169312, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI17137324, Length=197, Percent_Identity=27.9187817258883, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI116008157, Length=200, Percent_Identity=27, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PGMB_ECOLI (P77366)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: H64880 - RefSeq: AP_001943.1 - RefSeq: NP_415833.1 - ProteinModelPortal: P77366 - SMR: P77366 - STRING: P77366 - EnsemblBacteria: EBESCT00000000872 - EnsemblBacteria: EBESCT00000015701 - GeneID: 945891 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1310 - KEGG: eco:b1317 - EchoBASE: EB3677 - EcoGene: EG13918 - eggNOG: COG0637 - GeneTree: EBGT00050000009691 - HOGENOM: HBG742904 - OMA: YIVDANE - ProtClustDB: CLSK880111 - BioCyc: EcoCyc:G6655-MONOMER - BioCyc: MetaCyc:G6655-MONOMER - Genevestigator: P77366 - InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 - Gene3D: G3DSA:3.40.50.1000 - PRINTS: PR00413 - TIGRFAMs: TIGR01990 - TIGRFAMs: TIGR01509 - TIGRFAMs: TIGR02009
Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784
EC number: =5.4.2.6
Molecular weight: Translated: 23565; Mature: 23565
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCC GKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH NASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHG CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHCC GKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECC APTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI CCHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCHHHHCHHHH NASGMRSVGIGAGLTGAQLLLPSTESLTWPRLSAFWQNV CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503