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The map label for this gene is ychJ

Identifier: 157160739

GI number: 157160739

Start: 1336932

End: 1337390

Strand: Reverse

Name: ychJ

Synonym: EcHS_A1341

Alternate gene names: 157160739

Gene position: 1337390-1336932 (Counterclockwise)

Preceding gene: 157160743

Following gene: 157160738

Centisome position: 28.8

GC content: 46.41

Gene sequence:

>459_bases
GTGTCTCAGCTTTGTCCCTGTGGTAGTGCTGTCGAGTATAGCCTATGTTGCCACCCTTATGTGTCTGGTGAAAAGGTTGC
ACCTGATCCAGAACATCTCATGCGTTCGCGTTACTGCGCTTTTGTGATGCAAGACGCAGATTATTTAATAAAGACCTGGC
ATCCATCTTGTGGAGCAGCGGCGTTACGTGCCGAATTGATTGCCGGATTTGCGCATACTGAATGGTTGGGATTGACCGTA
TTTGAACATTGTTGGCAGGACGCCGACAATATCGGATTTGTCAGTTTTGTTGCTCGATTTACCGAAGGTGGCAAAACAGG
TGCAATAATTGAACGTTCGCGATTTTTGAAAGAAAACGGTCAATGGTACTATATTGACGGTACACGTCCGCAGTTTGGCC
GCAACGATCCCTGCCCTTGTGGTTCAGGTAAAAAATTTAAAAAGTGCTGCGGCCAATAA

Upstream 100 bases:

>100_bases
ATTCCCCTGGAATGCAATCGTAGCCACATCGCTACTGCTCGGTTAACATAGTGCTACTCAGGCGGTTAATACGCCGTTAT
TGTTTCCAGGGAGATTATTT

Downstream 100 bases:

>100_bases
TGGTTGACGGTACGGTTTAGCAAACACTCTCAACAAGGTTTTTCCAGCAATGCATTCACTCCAACGTAAAGTTCTGCGTA
CTATTTGTCCGGACCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELIAGFAHTEWLGLTV
FEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Sequences:

>Translated_152_residues
MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELIAGFAHTEWLGLTV
FEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
>Mature_151_residues
SQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELIAGFAHTEWLGLTVF
EHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=152, Percent_Identity=99.3421052631579, Blast_Score=319, Evalue=4e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCHJ_ECO24 (A7ZL06)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462485.1
- ProteinModelPortal:   A7ZL06
- SMR:   A7ZL06
- STRING:   A7ZL06
- EnsemblBacteria:   EBESCT00000018864
- GeneID:   5585942
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1382
- eggNOG:   COG3012
- GeneTree:   EBGT00050000010014
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- ProtClustDB:   PRK01617
- BioCyc:   ECOL331111:ECE24377A_1382-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 16972; Mature: 16841

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAA
CCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
ALRAELIAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAA
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
ALRAELIAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
QWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
CEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA