Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157160366
Identifier: 157160366
GI number: 157160366
Start: 946310
End: 946792
Strand: Direct
Name: 157160366
Synonym: EcHS_A0947
Alternate gene names: NA
Gene position: 946310-946792 (Clockwise)
Preceding gene: 157160365
Following gene: 157160367
Centisome position: 20.38
GC content: 54.04
Gene sequence:
>483_bases ATGATGGTGCTGGGATTGTACGTGTTTATGCTGCGCACCGTTCCGTATCAGGAACTGCAGTATCAACGCAGCTGGCGACA TGCGGCAAACAGCCGGGTAAATCGTCGTCCGTCCACGCAGTTTCTGGGACCGGACAACGACATGCTGACGCTTTCCGGTG TTCTTATGCCGGAGATAACAGGCGGCAGGCTGTCGTTGCTGGCACTGGAGCAGATGGCAGAACAGGGGAAAGCATGGCCC CTGATTGAAGGCAGCGGCACGATTTACGGCATGTATGTGATTGAGGGACTGAATCAGACTAAAACGGAGTTTTTCCGCGA CGGTATGCCGCGCCGGATTGAGTTCACCCTGTCGCTCAAACGCGTGGATGAATCCCTGTCCGATATGTTCGGTGATCTCA GTGCGCAACTGAATAATCTTCAGGACACGGCAACATCTGTCTTAAGCGATATCAGTAAAACGGTGGGAGGGCTGCTGTCG TGA
Upstream 100 bases:
>100_bases ATATTGCGCGGGAGGTGGCACGCCAGCTTGATGAACGTGAACGCAGGCTGAAGGCAAAAGCCAGGAGTAACTACAGCGAT CAGGGGGGATACGACGCATG
Downstream 100 bases:
>100_bases ATTTCAGCTCTGAACTGCTTAACAAAGGCAACAAAACTCCCGCATTCAGCATCAGTATTGAGGGCAGGGATATCACCACA GTGCTGGACAACCGCCTGAT
Product: phage protein gpU
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Fels-2 Prophage Protein; Tail Fiber Protein Of Prophage; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein; Tail Protein U
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAWP LIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSVLSDISKTVGGLLS
Sequences:
>Translated_160_residues MMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAWP LIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSVLSDISKTVGGLLS >Mature_160_residues MMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAWP LIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSVLSDISKTVGGLLS
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17943; Mature: 17943
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEIT CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCCC GGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLK CCHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEHHHH RVDESLSDMFGDLSAQLNNLQDTATSVLSDISKTVGGLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEIT CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEECCCCC GGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLK CCHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCEEEEEHHHH RVDESLSDMFGDLSAQLNNLQDTATSVLSDISKTVGGLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA