Click here to switch to the map view.

The map label for this gene is b2083 [C]

Identifier: 157160367

GI number: 157160367

Start: 946789

End: 947889

Strand: Direct

Name: b2083 [C]

Synonym: EcHS_A0948

Alternate gene names: 157160367

Gene position: 946789-947889 (Clockwise)

Preceding gene: 157160366

Following gene: 157160368

Centisome position: 20.39

GC content: 55.04

Gene sequence:

>1101_bases
GTGAATTTCAGCTCTGAACTGCTTAACAAAGGCAACAAAACTCCCGCATTCAGCATCAGTATTGAGGGCAGGGATATCAC
CACAGTGCTGGACAACCGCCTGATGGGGCTGACGCTGACGGATAACCGGGGCTTTGAAGCAGACCAGCTTGATCTGGAGC
TGGACGACGCCGACGGAAAAATCGTGCTGCCGCGTCGTGGTGCGGTCGTTACGCTGGCGCTGGGTTGGAAGGGGCAGCCG
CTTTTCCCGAAAGGGGCATTCACGGTGGACGAGATTGAACACACTGGCGCACCGGACCGCCTGACTATCCGGGCGCGAAG
TGCTGATTTTCGGGAAACGCTGAATACCCGCCGTGAAAAATCGTGGCATAAGACCACCGTCGGGGAAGTGGTGAAGGAAA
TAGCCTCGCGGCACAAGCTGAAGATGGCACTGGGTAAAGACCTGTCGGATAAGCTCGTAGAGCATATAGACCAGACTAAT
GAGAGTGACGGCAGTTTTCTGATGCGGCTGGCGCGCCAGTACGGTGCCATCGCGTCGGTGAAAAATGGCAATCTGTTATT
CATCCGGCAGGGACAGGGCAAAAGCGCCACTGGTAAACCACTGCCGGTGATCACTATCACACGCAAGGACGGCGACAGTC
ACCGCTTTACCCTGGCAGATCGCGGAGCCTACACGGGGGTAATTGCCAGCTGGTTGCATACCCGCGAACCCGCGAAGAAA
GAAAGCACTACGGTGAAGCGTAAGCGCAGGACTAAGAAGCAGAAGAAAGAGCCGGAAGCGAAGCAGGGCGATTACCTGGT
GGGGACGGATGAAAACGTGCTGGTACTTAATCGCACTTATGCCAACCGGAGCAACGCTGAACGGGCAGCGAAAATGCAGT
GGGAACGCCTGCAACGTGGCGTTGCGTCATTCTCGCTACAACTGGCGGAAGGGCGGGCAGATCTCTACACGGAAATGCCA
GTGAAAGTCAGTGGCTTTAAACAGCCGATAGATGATGCGGAATGGACCATTACGACTCTGACGCATACCGTAAGCCCGGA
TAATGGTTTTACGACCAGTCTGGAGCTTGAAGTGAGGATTGATGATTTCGAAATGGAATGA

Upstream 100 bases:

>100_bases
CCGATATGTTCGGTGATCTCAGTGCGCAACTGAATAATCTTCAGGACACGGCAACATCTGTCTTAAGCGATATCAGTAAA
ACGGTGGGAGGGCTGCTGTC

Downstream 100 bases:

>100_bases
TTCTTCGCAATGGAGAACTTTTAAGTTTGCAAAATGGAATAATGCGGTATCATTATTGTGAATTTAGCAAAAATGGGGAG
AACTCGAAAAATGATGATTT

Product: phage late control gene D protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Tail Protein D; Bacteriophage Regulatory Protein; Late Control Gene D Protein; Phage-Related Tail Protein; Phage Protein D; Regulator Of Late Gene Expression; Bacteriophage Protein; Phage Protein; Phage Late Control D Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Late Gene Regulator

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVVTLALGWKGQP
LFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEIASRHKLKMALGKDLSDKLVEHIDQTN
ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK
ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP
VKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRIDDFEME

Sequences:

>Translated_366_residues
MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVVTLALGWKGQP
LFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEIASRHKLKMALGKDLSDKLVEHIDQTN
ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK
ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP
VKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRIDDFEME
>Mature_366_residues
MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVVTLALGWKGQP
LFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREKSWHKTTVGEVVKEIASRHKLKMALGKDLSDKLVEHIDQTN
ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK
ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP
VKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRIDDFEME

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40987; Mature: 40987

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGK
CCCHHHHHHCCCCCCEEEEEECCCEEHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCE
IVLPRRGAVVTLALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREK
EEEECCCCEEEEEECCCCCCCCCCCCEEHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
SWHKTTVGEVVKEIASRHKLKMALGKDLSDKLVEHIDQTNESDGSFLMRLARQYGAIASV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEE
KNGNLLFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK
CCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCHH
ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRG
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
VASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRI
HHHEEEEEECCCCHHEEECCEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEE
DDFEME
CCCCCC
>Mature Secondary Structure
MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRGFEADQLDLELDDADGK
CCCHHHHHHCCCCCCEEEEEECCCEEHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCCE
IVLPRRGAVVTLALGWKGQPLFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNTRREK
EEEECCCCEEEEEECCCCCCCCCCCCEEHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
SWHKTTVGEVVKEIASRHKLKMALGKDLSDKLVEHIDQTNESDGSFLMRLARQYGAIASV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEE
KNGNLLFIRQGQGKSATGKPLPVITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK
CCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCHH
ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRG
HHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
VASFSLQLAEGRADLYTEMPVKVSGFKQPIDDAEWTITTLTHTVSPDNGFTTSLELEVRI
HHHEEEEEECCCCHHEEECCEEECCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEE
DDFEME
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA