Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157160330
Identifier: 157160330
GI number: 157160330
Start: 918700
End: 919269
Strand: Reverse
Name: 157160330
Synonym: EcHS_A0911
Alternate gene names: NA
Gene position: 919269-918700 (Counterclockwise)
Preceding gene: 157160342
Following gene: 157160328
Centisome position: 19.8
GC content: 40.18
Gene sequence:
>570_bases ATGAATTTGGAGAAAGGCGGACGAGGCGCTATAGAGCGCATGGTAGAAGCTTATGGATTCAAGACTCGACAGGCGTTGTG CGATCATTTAGGAATCTCTAAAAGTACACTCGCCACACGCTACATGCGTGACTCATTCCCAGCAGAATGGGTAATCCAGT GCGCCCTTGAAACAGGCACCTCGCTTAATTGGCTCACAACCGGGCATGGTTCAAAGCAAACTTCAGGTAATACAAATACT ATGGAAGTTGCTAAATATGTATTATCTGATGGGGCCTTGTGTGAAGACGGTTTTTATATTTTCGATAGAGAATTTCTACC GTCGGCATTCAAGAATCTTTTTGTAATCACAGATAATAATTCTGAATTTATTTGTGATAAGGAATTTGATGATATACGTG ATGGTAAATGGGTAATAAGTATTGATGGCGAAATAACGATCCGTGACATTACTCGTTTACCCGGTGGAAGAATCTTCGTC GAGGGTGGAAACAGAGCCTTCGAATGCAAGATAGAAGACATTGAAATAATTGGTAAAATTATAAGCTTAACAGTCAAGTA TGTTAAATAG
Upstream 100 bases:
>100_bases GATTAATCAGGACGAATACGGATCGTTTGTATTTTGTGAACACCATAAACATACGATCGCACAGTGAAATCGTCAAGATA AAAGTTCACTTGGAGTGACC
Downstream 100 bases:
>100_bases TACCGGGAGGAAATTATGCTTGGTAAGGTATTTTTTGTGGTTTTGTCATGTTCTTTGTTATTAAACCCACTAGCTACCTA TGCTAGAAATTATCCCTGCT
Product: putative bacteriophage CI repressor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNT MEVAKYVLSDGALCEDGFYIFDREFLPSAFKNLFVITDNNSEFICDKEFDDIRDGKWVISIDGEITIRDITRLPGGRIFV EGGNRAFECKIEDIEIIGKIISLTVKYVK
Sequences:
>Translated_189_residues MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNT MEVAKYVLSDGALCEDGFYIFDREFLPSAFKNLFVITDNNSEFICDKEFDDIRDGKWVISIDGEITIRDITRLPGGRIFV EGGNRAFECKIEDIEIIGKIISLTVKYVK >Mature_189_residues MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNT MEVAKYVLSDGALCEDGFYIFDREFLPSAFKNLFVITDNNSEFICDKEFDDIRDGKWVISIDGEITIRDITRLPGGRIFV EGGNRAFECKIEDIEIIGKIISLTVKYVK
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010744 [H]
Pfam domain/function: PF07022 Phage_CI_repr [H]
EC number: NA
Molecular weight: Translated: 21228; Mature: 21228
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGT CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC SLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALCEDGFYIFDREFLPSAFKNLFVITDNN CEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHCCEEEEECCC SEFICDKEFDDIRDGKWVISIDGEITIRDITRLPGGRIFVEGGNRAFECKIEDIEIIGKI CCEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEECCCEEEEEEEHHHHHHHHH ISLTVKYVK HHHHHEECC >Mature Secondary Structure MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRDSFPAEWVIQCALETGT CCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCC SLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALCEDGFYIFDREFLPSAFKNLFVITDNN CEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEECCCEEEEEHHHHHHHHCCEEEEECCC SEFICDKEFDDIRDGKWVISIDGEITIRDITRLPGGRIFVEGGNRAFECKIEDIEIIGKI CCEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCCEEEEECCCEEEEEEEHHHHHHHHH ISLTVKYVK HHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1701261 [H]