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The map label for this gene is 157160342

Identifier: 157160342

GI number: 157160342

Start: 927547

End: 928572

Strand: Reverse

Name: 157160342

Synonym: EcHS_A0923

Alternate gene names: NA

Gene position: 928572-927547 (Counterclockwise)

Preceding gene: 157160343

Following gene: 157160330

Centisome position: 20.0

GC content: 49.81

Gene sequence:

>1026_bases
ATGGGAAAGAGTAAGAAGAACCGCGCTGCGGCGACGAAACAGATCCAGCTTAAAAGTCAAACTACAGCCGAAGCATTCAG
CTTCGGCGATCCCGTTCCTGTTCTGGACCGCCGAGAACTGCTGGATTATGTGGAATGCGTACAGATGGACCGCTGGTATG
AGCCGCCCGTCAGCTTTGACGGACTGGCGCGCACCTTCCGCGCTGCCGTGCATCATAGTTCCCCGATTGCAGTAAAGTGC
AACATTCTGACCAGCACCTACATCCCTCACCCGCTGCTCAGCCAGCAGGCTTTTTCGCGTTTTGTGCAGGACTATCTGGT
ATTTGGTAACGCCTACCTGGAGAAACGCACGAACCGCTTCGGTGAAGTTATCGCCCTTGAACCTGCCCTGGCAAAATATA
CCCGACGCGGGTTAGACCTGGATACCTACTGGTTTGTGCAATACGGTATGACCACGCAGCCATATCAGTTCACGAAAGGC
AGCATCTTTCATCTGATGGAACCGGACATCAACCAGGAGATCTACGGCCTGCCCGGTTATCTTTCTGCCATTCCGTCAGC
CCTGCTCAACGAGTCCGCCACGCTGTTCCGCCGAAAGTATTACATTAACGGCAGTCATGCTGGCTTCATCATGTACATGA
CCGATGCTGCGCAGAACCAGGAGGATGTGAACAACCTCCGCAACGCAATGAAAAGCGCCAAAGGTCCAGGCAACTTCCGC
AACCTGTTTATGTACTCACCTAACGGCAAAAAGGATGGTCTTCAGATTATCCCGTTGTCAGAAGTCGCGGCGAAGGATGA
ATTTCTGAATATCAAAAATGTCAGCCGCGACGACATGATGGCTGCGCACCGTGTACCGCCACAAATGATGGGGATAATGC
CTAATAATGTTGGGGGATTTGGGGATGTGGAGAAAGCCTGCAAAGTATTTGTTAGAAATGAGTTAACAGTATTACAAAAA
AAAATACTGGAACTGAACACTTGGTTAGATGATGATGTAATTAATTTTAATGAGTATATGCTTTGA

Upstream 100 bases:

>100_bases
CCAGCCATGCCGATCTGGCCTGGGCAACAATGCACGCACTGTTTAACGAACCGCTGCAGGGCGAGTCCGCCAATACCAGC
AATATTGTGGAGATTTTTTG

Downstream 100 bases:

>100_bases
TGAAATAGGGGGCTAACGCCCCTATTTTTAATCATTTTCTGGTTTGTTTGAAGTTTCATTTACAGGCTGGATCACATCCT
TATTAAAATGGCGCGTTTGT

Product: PBSX family phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MGKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKC
NILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR
NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKACKVFVRNELTVLQK
KILELNTWLDDDVINFNEYML

Sequences:

>Translated_341_residues
MGKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKC
NILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKG
SIFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR
NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKACKVFVRNELTVLQK
KILELNTWLDDDVINFNEYML
>Mature_340_residues
GKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFDGLARTFRAAVHHSSPIAVKCN
ILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRFGEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGS
IFHLMEPDINQEIYGLPGYLSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFRN
LFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGFGDVEKACKVFVRNELTVLQKK
ILELNTWLDDDVINFNEYML

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 38777; Mature: 38646

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFD
CCCCCCHHHHHHHEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
GLARTFRAAVHHSSPIAVKCNILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRF
HHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLMEPDINQEIYGLPGY
CCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCHH
LSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR
HHHHHHHHHCCHHHHHHEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGF
EEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC
GDVEKACKVFVRNELTVLQKKILELNTWLDDDVINFNEYML
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC
>Mature Secondary Structure 
GKSKKNRAAATKQIQLKSQTTAEAFSFGDPVPVLDRRELLDYVECVQMDRWYEPPVSFD
CCCCCHHHHHHHEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
GLARTFRAAVHHSSPIAVKCNILTSTYIPHPLLSQQAFSRFVQDYLVFGNAYLEKRTNRF
HHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GEVIALEPALAKYTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLMEPDINQEIYGLPGY
CCEEEECHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCHH
LSAIPSALLNESATLFRRKYYINGSHAGFIMYMTDAAQNQEDVNNLRNAMKSAKGPGNFR
HHHHHHHHHCCHHHHHHEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC
NLFMYSPNGKKDGLQIIPLSEVAAKDEFLNIKNVSRDDMMAAHRVPPQMMGIMPNNVGGF
EEEEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCC
GDVEKACKVFVRNELTVLQKKILELNTWLDDDVINFNEYML
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]