Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157159774
Identifier: 157159774
GI number: 157159774
Start: 323614
End: 325440
Strand: Direct
Name: 157159774
Synonym: EcHS_A0320
Alternate gene names: NA
Gene position: 323614-325440 (Clockwise)
Preceding gene: 157159773
Following gene: 157159777
Centisome position: 6.97
GC content: 47.51
Gene sequence:
>1827_bases ATGGCCTATAGTCGTGAACAGTTGATGACGGCGTTAAGGAATGCTGATGCTGCCGGCGATACTGAGGGGGCACGTCGCAT TGCTCAGATGCTGTCTTCTGGTGATCAATCCACTCAAAACCAATCGCAGCCAGAAGAACAATCTCTGGTGGGAAAAGCTA CTGACTGGCTCACTGGTGGTCAAAGTGCAGGGCAAATTGCAGAACAGGCTGGCCGTGGTCTGGTAAACATACCATTTGAC GTATTGCAGGGTGGCGCAAGTCTGATTAATGCAATCAGCCAGGGTCTTGGTGGCCCCAAGGTTTTGGATGATGTTTATCG TCCAGTAGATCGACCAACAGACCCTTATGCGCAAGCTGGAGAAACAATTGGCGGGTATTTAGTTCCAGGAGTTGGAACGG CAGGAAGCATGGCTATTGGATCACTGGCAGAGGCCGCAAATCAGAAAGGCGATTTCGCACAAAATGCAGCCAAAAATGCC GGAGTTAACCTTGCCGCTCAGGGTGTTCTTTCCGCAGCAGCAAAGGGAATAGGGCGTGGAATAACGGCTATAAAAGGTGA TATTGCGCCAGAAGTGGCGAAGAAAATTGCCACATCAGAATCGATGGGCGTGACACCAATGACATCTGATGTTATCCCGC CGAAAAATGCTTTCACTCGTGGCCTTACTCAGGATGCCGAGGGGGCTTTGCTCGGGACAGGCTCAAAGAGAGCGGAGCAA TATGCAACGCGTAGTAAACTGGTAAGCAATTATTTTGACCGTTTTGGTGAGTACAACCCTGATGATGTGGTGAAATCTCT TACCACCACGTTAAGGGGGCGGAAGGATGCCGCTGGCGCTGTTATCAATGACGTCACCAATAAAATGGGTAATGCCGCAG TTGATACCACAAATACCATGAATGCTCTGAATACAGCGATCGCAAGACAGGAACGGCTTGGGACGTCTGCCAATCAAAGC CTGCTTACATCCTTGCGTAACCTACGTGAAGAATTAGCAAACCCTGCAACTGATTTGGATGTTACGTTTGATCTCTTGCG TCAGCACAGAACAGCATTTAGATCTAATGTTCAGGGAGATGCTATGGTCTTCCCCAACCAGGCAAAAGCAGCTACCAATA TGGTAGAGAATGCAATGTCAAAAGACCTTCGTAACGCAGTTGCTAAAAACCTCGGTGCATCAGACGCAGCAAAATACCTT AAAGCAAATTCCGATTATGCAAACGTTTATAATAAGGTGCTTAATAAAAACATTGCCAACAAGCTCAACAAGGCAAGCAG TGAAGCCAGTCCTGAACTTATAAATACCGTTGTATTAAGCAGAAAACCATCTGACGTGAAACGAATCTGGAGCGCACTGG ATGATAAAGGGAAAGATGCTATGCGTGCAGCTTACGTCAGCAAAATAGCGGAAAAGGCCGGCGACTCTCCAGCCAAGTTC ATCACTGAAGTTAATAAGCTGAAATCTCAGTCAGGAGGTGAAATTTACAACACTATTTTTTCTGGAAAGCACATGAAAGA ACTTGATGCTCTTAATGAAGTTCTACAGCAAACAGCAAGGTCAGACACCGCAAATGTAGTAACTCAGACGGGGCAATCGC AAGCCAACAGGATAAGGACGATTGGCGCAACTGCGACTCTTGGCGTATCAATGGGGCTTGAGGCTGGTTTCGGTGCAATG ATGCGCTTGTATGAGTCCAAAGCAGCAAGGAATGCGCTCTTACGTCTGGCAAACACTAAAGCTGGAACGCCAGCCTATGA AAGAGCGCTGAATAACGCCGCAAATGCCATCAGACCAATACTTGCCAATGATGCAACTGATCGCTAA
Upstream 100 bases:
>100_bases CTGCGGCAAAACGTTTTCTTTCCTCAAGTTATGGCGATAGCCAACCTCAACAGCAATTGTCCGATGACGAATTAATTAGC AAATATCTCGGAGGGCAGTA
Downstream 100 bases:
>100_bases GGGTTGATGTCATGGATGTTGTTAATTGCGAATGGAATCGCGGAACTCTTTGCTTGATAGAAAAGGATCTGTTCTCCTTA ACTCATCATAGTTTTTATTA
Product: putative injection protein
Products: NA
Alternate protein names: Injection Protein; DNA Transfer Protein Phage; DNA Transfer Protein Bacteriophage; APSE-2 Prophage
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MAYSREQLMTALRNADAAGDTEGARRIAQMLSSGDQSTQNQSQPEEQSLVGKATDWLTGGQSAGQIAEQAGRGLVNIPFD VLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAAKNA GVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGALLGTGSKRAEQ YATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDAAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGTSANQS LLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYL KANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWSALDDKGKDAMRAAYVSKIAEKAGDSPAKF ITEVNKLKSQSGGEIYNTIFSGKHMKELDALNEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEAGFGAM MRLYESKAARNALLRLANTKAGTPAYERALNNAANAIRPILANDATDR
Sequences:
>Translated_608_residues MAYSREQLMTALRNADAAGDTEGARRIAQMLSSGDQSTQNQSQPEEQSLVGKATDWLTGGQSAGQIAEQAGRGLVNIPFD VLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAAKNA GVNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGALLGTGSKRAEQ YATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDAAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGTSANQS LLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYL KANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWSALDDKGKDAMRAAYVSKIAEKAGDSPAKF ITEVNKLKSQSGGEIYNTIFSGKHMKELDALNEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEAGFGAM MRLYESKAARNALLRLANTKAGTPAYERALNNAANAIRPILANDATDR >Mature_607_residues AYSREQLMTALRNADAAGDTEGARRIAQMLSSGDQSTQNQSQPEEQSLVGKATDWLTGGQSAGQIAEQAGRGLVNIPFDV LQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAGETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAAKNAG VNLAAQGVLSAAAKGIGRGITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGALLGTGSKRAEQY ATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDAAGAVINDVTNKMGNAAVDTTNTMNALNTAIARQERLGTSANQSL LTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGDAMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLK ANSDYANVYNKVLNKNIANKLNKASSEASPELINTVVLSRKPSDVKRIWSALDDKGKDAMRAAYVSKIAEKAGDSPAKFI TEVNKLKSQSGGEIYNTIFSGKHMKELDALNEVLQQTARSDTANVVTQTGQSQANRIRTIGATATLGVSMGLEAGFGAMM RLYESKAARNALLRLANTKAGTPAYERALNNAANAIRPILANDATDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64167; Mature: 64036
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSREQLMTALRNADAAGDTEGARRIAQMLSSGDQSTQNQSQPEEQSLVGKATDWLTGG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC QSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAG CHHHHHHHHHCCCCEECCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHC ETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAAKNAGVNLAAQGVLSAAAKGIGRG CCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC ITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGALLGTGSKRAEQ HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEECCCHHHHHH YATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDAAGAVINDVTNKMGNAAVDTTNTM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHH NALNTAIARQERLGTSANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC AMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLKANSDYANVYNKVLNKNIAN EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLNKASSEASPELINTVVLSRKPSDVKRIWSALDDKGKDAMRAAYVSKIAEKAGDSPAKF HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH ITEVNKLKSQSGGEIYNTIFSGKHMKELDALNEVLQQTARSDTANVVTQTGQSQANRIRT HHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH IGATATLGVSMGLEAGFGAMMRLYESKAARNALLRLANTKAGTPAYERALNNAANAIRPI HCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LANDATDR HHCCCCCC >Mature Secondary Structure AYSREQLMTALRNADAAGDTEGARRIAQMLSSGDQSTQNQSQPEEQSLVGKATDWLTGG CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC QSAGQIAEQAGRGLVNIPFDVLQGGASLINAISQGLGGPKVLDDVYRPVDRPTDPYAQAG CHHHHHHHHHCCCCEECCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHC ETIGGYLVPGVGTAGSMAIGSLAEAANQKGDFAQNAAKNAGVNLAAQGVLSAAAKGIGRG CCCCCEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCC ITAIKGDIAPEVAKKIATSESMGVTPMTSDVIPPKNAFTRGLTQDAEGALLGTGSKRAEQ HHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEECCCHHHHHH YATRSKLVSNYFDRFGEYNPDDVVKSLTTTLRGRKDAAGAVINDVTNKMGNAAVDTTNTM HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHH NALNTAIARQERLGTSANQSLLTSLRNLREELANPATDLDVTFDLLRQHRTAFRSNVQGD HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC AMVFPNQAKAATNMVENAMSKDLRNAVAKNLGASDAAKYLKANSDYANVYNKVLNKNIAN EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH KLNKASSEASPELINTVVLSRKPSDVKRIWSALDDKGKDAMRAAYVSKIAEKAGDSPAKF HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH ITEVNKLKSQSGGEIYNTIFSGKHMKELDALNEVLQQTARSDTANVVTQTGQSQANRIRT HHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH IGATATLGVSMGLEAGFGAMMRLYESKAARNALLRLANTKAGTPAYERALNNAANAIRPI HCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LANDATDR HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA