Definition | Escherichia coli HS, complete genome. |
---|---|
Accession | NC_009800 |
Length | 4,643,538 |
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The map label for this gene is 157159773
Identifier: 157159773
GI number: 157159773
Start: 322229
End: 323614
Strand: Direct
Name: 157159773
Synonym: EcHS_A0319
Alternate gene names: NA
Gene position: 322229-323614 (Clockwise)
Preceding gene: 157159772
Following gene: 157159774
Centisome position: 6.94
GC content: 47.76
Gene sequence:
>1386_bases ATGGCTACGTGGCAACAGGGTATTAATTCTGGTGGGTTTCTTGCTGGCATCGGTGCGCAAAATGAGAATGCGCCAAAGGC AAGCGACATTAACGCAACGCTTGGTCTGATCCGCGAAAACAATGAACTGGCTCGCTCAGGTGCAAATAACGTTGGTCTGA CCGCGTTACGTGGTCTGGCTGGAGTTGCTGATATTTACAAGCAGGAACAGCAACAGAAAGCGATTAATGCGTTCAATAAG GTTCATGCTGATGCATGGGCTTCTGGTGATCCATCGGGACTATTTAAGTTTGCCCAGGAAAATCCAGCGTTTGTTGCACA GGCACAACAGGCGTTTTCTGGTCTTAATGATCAGCAACGCAACGATATGGGCGATTTAGCCATGAGGGCTAACGTCGCTC TTTCTCAGGGACCGGAAGCCTACAGTAAATTCATTACTGACAACAAGGACAGGTTAAATCGCGTTGGTGCTAATGCTGAC TGGATGATTCAGACAGGTATCCAGAATCCAGAGCAGCTATCACACATGCTGACTACTATGTCTCTCGGTGCGCTTGGACC AGAAAAGGCGTTTGCTGTTCAGGATAAGATGGCTGGTCGTGAAATTGACCGAGGCAGGCTGGCAGAGACAATCCGCAGCA ATCAGGCTGGCGAGGCACTTCAGGCGAGAGGGCAAAACCTTTCCTATCAGTCAGCAATGACTGGACACGGACTTGCAGCA GAAAGACTGGCACTTGATAAGCAGAAATTCGGTTTTGAAGTACAACAGGCACAAAAGAAGGCCGATGAACTTATTAATGC TGCGCCAAAACTATCCGTGAACATGGAAAAGGCTATAGAAAAATCAGCAGGTGATGCGGCAGCTAGTCGTAATGCTGCCG ATTCAATGACAACGCTTGCTGACACGCTTGAGAAGGAGAAGCCAACTCCTGGTTTGTTCGGTAACGCTGAAAATATGTTC ACTAAGCTTACGGGGCAAGATAACTACCTCCGAGATATGCGGATTAGATTCAACCAACTAGCCAATGCGCAGGCAACCAA GCTTCTCCCCCCCGGCCCTGCATCAGATAAGGATATTGAGTTTGCAAGGAAAGGCATTCCAAGCGAAACGGATAATCCAA TGGTCATGGCTCGATGGTTAAGGGGTATGGCAAAAATGGAAAGTAATAACGCGAAGTTCAACGAGTTTAGGTCAGAGTGG ATGAGTGCAAATGGCAGCCCAGGACAATCTGATCGCAACCGAAACATCATGGGGATGGATGTTAAGAAGGGTGAATCATT GAACTCTGCGGCAAAACGTTTTCTTTCCTCAAGTTATGGCGATAGCCAACCTCAACAGCAATTGTCCGATGACGAATTAA TTAGCAAATATCTCGGAGGGCAGTAA
Upstream 100 bases:
>100_bases GGTGGTGGCATAGCCAGTGCTCTCGAGCTATCAACTCCGTGGGGTGCTGGTATTGGTGCTGGTCTTGGTCTGCTTGGTTC ACTGTTTTAAGGGGTAATCA
Downstream 100 bases:
>100_bases TGGCCTATAGTCGTGAACAGTTGATGACGGCGTTAAGGAATGCTGATGCTGCCGGCGATACTGAGGGGGCACGTCGCATT GCTCAGATGCTGTCTTCTGG
Product: putative DNA transfer protein
Products: NA
Alternate protein names: DNA Transfer Protein Gp; Prophage DNA Injection Protein; APSE-2 Prophage; DNA Injection Protein
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNELARSGANNVGLTALRGLAGVADIYKQEQQQKAINAFNK VHADAWASGDPSGLFKFAQENPAFVAQAQQAFSGLNDQQRNDMGDLAMRANVALSQGPEAYSKFITDNKDRLNRVGANAD WMIQTGIQNPEQLSHMLTTMSLGALGPEKAFAVQDKMAGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHGLAA ERLALDKQKFGFEVQQAQKKADELINAAPKLSVNMEKAIEKSAGDAAASRNAADSMTTLADTLEKEKPTPGLFGNAENMF TKLTGQDNYLRDMRIRFNQLANAQATKLLPPGPASDKDIEFARKGIPSETDNPMVMARWLRGMAKMESNNAKFNEFRSEW MSANGSPGQSDRNRNIMGMDVKKGESLNSAAKRFLSSSYGDSQPQQQLSDDELISKYLGGQ
Sequences:
>Translated_461_residues MATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNELARSGANNVGLTALRGLAGVADIYKQEQQQKAINAFNK VHADAWASGDPSGLFKFAQENPAFVAQAQQAFSGLNDQQRNDMGDLAMRANVALSQGPEAYSKFITDNKDRLNRVGANAD WMIQTGIQNPEQLSHMLTTMSLGALGPEKAFAVQDKMAGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHGLAA ERLALDKQKFGFEVQQAQKKADELINAAPKLSVNMEKAIEKSAGDAAASRNAADSMTTLADTLEKEKPTPGLFGNAENMF TKLTGQDNYLRDMRIRFNQLANAQATKLLPPGPASDKDIEFARKGIPSETDNPMVMARWLRGMAKMESNNAKFNEFRSEW MSANGSPGQSDRNRNIMGMDVKKGESLNSAAKRFLSSSYGDSQPQQQLSDDELISKYLGGQ >Mature_460_residues ATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNELARSGANNVGLTALRGLAGVADIYKQEQQQKAINAFNKV HADAWASGDPSGLFKFAQENPAFVAQAQQAFSGLNDQQRNDMGDLAMRANVALSQGPEAYSKFITDNKDRLNRVGANADW MIQTGIQNPEQLSHMLTTMSLGALGPEKAFAVQDKMAGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHGLAAE RLALDKQKFGFEVQQAQKKADELINAAPKLSVNMEKAIEKSAGDAAASRNAADSMTTLADTLEKEKPTPGLFGNAENMFT KLTGQDNYLRDMRIRFNQLANAQATKLLPPGPASDKDIEFARKGIPSETDNPMVMARWLRGMAKMESNNAKFNEFRSEWM SANGSPGQSDRNRNIMGMDVKKGESLNSAAKRFLSSSYGDSQPQQQLSDDELISKYLGGQ
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49975; Mature: 49844
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNELARSGANNVGLTALRGLA CCCHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHH GVADIYKQEQQQKAINAFNKVHADAWASGDPSGLFKFAQENPAFVAQAQQAFSGLNDQQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH NDMGDLAMRANVALSQGPEAYSKFITDNKDRLNRVGANADWMIQTGIQNPEQLSHMLTTM CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH SLGALGPEKAFAVQDKMAGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHGLAA HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHCCCCHHH ERLALDKQKFGFEVQQAQKKADELINAAPKLSVNMEKAIEKSAGDAAASRNAADSMTTLA HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHCCHHHHHHHHH DTLEKEKPTPGLFGNAENMFTKLTGQDNYLRDMRIRFNQLANAQATKLLPPGPASDKDIE HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHH FARKGIPSETDNPMVMARWLRGMAKMESNNAKFNEFRSEWMSANGSPGQSDRNRNIMGMD HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEE VKKGESLNSAAKRFLSSSYGDSQPQQQLSDDELISKYLGGQ CCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCC >Mature Secondary Structure ATWQQGINSGGFLAGIGAQNENAPKASDINATLGLIRENNELARSGANNVGLTALRGLA CCHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHH GVADIYKQEQQQKAINAFNKVHADAWASGDPSGLFKFAQENPAFVAQAQQAFSGLNDQQR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH NDMGDLAMRANVALSQGPEAYSKFITDNKDRLNRVGANADWMIQTGIQNPEQLSHMLTTM CCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH SLGALGPEKAFAVQDKMAGREIDRGRLAETIRSNQAGEALQARGQNLSYQSAMTGHGLAA HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHCCCCHHH ERLALDKQKFGFEVQQAQKKADELINAAPKLSVNMEKAIEKSAGDAAASRNAADSMTTLA HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHCCHHHHHHHHH DTLEKEKPTPGLFGNAENMFTKLTGQDNYLRDMRIRFNQLANAQATKLLPPGPASDKDIE HHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCHH FARKGIPSETDNPMVMARWLRGMAKMESNNAKFNEFRSEWMSANGSPGQSDRNRNIMGMD HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEE VKKGESLNSAAKRFLSSSYGDSQPQQQLSDDELISKYLGGQ CCCCCCHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA