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The map label for this gene is yhbJ [H]

Identifier: 156980668

GI number: 156980668

Start: 2479699

End: 2480346

Strand: Reverse

Name: yhbJ [H]

Synonym: SAHV_2337

Alternate gene names: 156980668

Gene position: 2480346-2479699 (Counterclockwise)

Preceding gene: 156980670

Following gene: 156980667

Centisome position: 86.12

GC content: 33.18

Gene sequence:

>648_bases
ATGAAAAAGATGATATTAATTAATGTCATTACGGTTGTTGTACTGTTAGCAATTGGGATTGCTGGCTTTTATTTCTGGAA
TAAAACAACAAGCTATGTAACAACTGATAATGCAAAAGTAAATGGCGATCAAATTAAAATAGCAAGTCCTGCATCTGGAC
AAATTAAATCACTTAATGTTAAACAAGGTGACAAACTCGATAAAGGTGACAAAGTAGCAACTGTTACTGTACAAGGTCAA
GATGGCGAAACGAAAGATATGGATCTTAAAATGCCTCAAAAAGGTACAATTGCCAAATTAGATGGTATGGAAGGTTCAAT
GGTGCAAGCTGGTAACCCAATCGCTTATGCATACAATTTAGATGATTTATATGTAACAGCAAATATTGACGAAAAAGATA
TTAAAGATGTTGAAGTAGGTAAAGATGTTGATGTGACTATTGACGGTCAAAAAGCTTCTATTAAAGGTAAAGTTGATAGT
ATTGGAAAAGCAACTGCTGCAAGCTTTTCATTAATGCCATCATCAAATAGTGATGGTAACTACACTAAAGTTTCTCAAGT
AATACCTGTTAAAATCACTCTAGAATCAGAACCGTCTAAACAAGTTGTTCCTGGAATGAACGCTGAAGTAAAAATCCATA
AAAATTAA

Upstream 100 bases:

>100_bases
TTTAACCAACACTCTTATAAAAATTGTTGGTGTTTTTTTAGTTATCATGTCTCTATAATAAATAAAGTGAATTTTAAAAG
CAAATAGGAGGAAATGTTTC

Downstream 100 bases:

>100_bases
GGGGGTCATTAAATGACTACGACCTTCATTATTAGCTACATTATTTTAGCGCTCATTATTGTTGGGGTTATCAATTTATT
TTTAATAAGATCAAGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQ
DGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDS
IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN

Sequences:

>Translated_215_residues
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQ
DGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDS
IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
>Mature_215_residues
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQ
DGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDS
IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788711, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789041, Length=112, Percent_Identity=29.4642857142857, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR006143
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 23013; Mature: 23013

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
CCEEEEHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCEECCCEEEEECCCCCCEEEEEC
KQGDKLDKGDKVATVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
CCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEECCCCCCEEECCCCEEEEEEC
DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
CEEEEEECCCHHCCCEEECCCCEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
EEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
CCEEEEHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCEECCCEEEEECCCCCCEEEEEC
KQGDKLDKGDKVATVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
CCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCEEEECCCCCCEEECCCCEEEEEEC
DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
CEEEEEECCCHHCCCEEECCCCEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN
EEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]