Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
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Accession | NC_009776 |
Length | 1,297,538 |
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The map label for this gene is dcm [C]
Identifier: 156937913
GI number: 156937913
Start: 1004313
End: 1005260
Strand: Direct
Name: dcm [C]
Synonym: Igni_1125
Alternate gene names: 156937913
Gene position: 1004313-1005260 (Clockwise)
Preceding gene: 156937912
Following gene: 156937914
Centisome position: 77.4
GC content: 59.18
Gene sequence:
>948_bases ATGAGGAGAGCGTTCTTTGACCTCTTCTCCGGGGCAGGGGGCTTCGCCTTAGGCTTTGAAATGGCCGGCTTTGAAGGGGT CTTGGGGGTGGACAACGACAAGGCGCCGGCGAGGAGCTACGCCGCCAACCACCCCAAGGCCTTAACGCTAGTGGAGGACG TGTCCAAGCTGAGCAGCAAGACCATAGAGAGGTTGGTAGGGGACGTGGACGTGGTAATAGGCTCTCCCCCGTGCGAGCCC TACACCGCCGCCAACCCCAAGAGGGAGAAGGACCCCTTGGACAGGCTGTACAAGGACCCGGTCGGGAGGCTGGTGCTCCA CTTCATAAGGATAGTTGGCGACTTGAAGCCCAAAGTATTTGTAATGGAAAATGTGAAAGGGCTGATAGAGGGGCCCTTGA AGGACGCCTTGAGGAGGGAGTTCGCGAGGGTTGGGTACCCGAAGGTCTACTTCAACGTACTTAGGGCGGAGGACTACTGC GTCCCCTCTCACAGGGTCAGGGTCTTCGTCTCTAACGTACCGCTCAGGCCCCCGAAGTGCAACAAGGTAATAACCGTAGA GGAGGCGTTGAGGGGCTTGCCGCCGCCGAACTTCGAGTGGCCCCCGAACCACGAGCCGCCCCACGTGCCCAAGAGGCTCG AGAGGAGGGCGGCCAAGCTCAAGTGGGGGGAGGCGCTAATACATTACAGGGGCAGCGGAGGCAAGCTCTACCCTAACATG ATAAAGCTCCACCCCAAGAAGCTCGCCCCCACGGTGCTCGGCAGCTCCCGCTTCTTCCACCCTTACGAGAACAGGCTGTT GACTGTTAGAGAGCAAGCGAGGTTGATGGGCTACCCGGACAACTTCATATTCTTGGGGGGTAAGGACAGCCAGTACAACC AAGTGGGCGAGTCCGTGCCACCCCCCTTGGCTAAGGCCATAGCTGAGGAAGCGCTCAAATTCCTTTGA
Upstream 100 bases:
>100_bases ACTTGTCCTAGATGCGGGGAGCCCCTAGAGCTGGCCGAGAGCAACCCTAGGAAGAAACTCCTCGAGAAGATAGTCAAGCG CCTCGAGGAGGAAATAAAGC
Downstream 100 bases:
>100_bases GCGACCTAGCGACGGGAAACGCAGCCTTGAAAGGGTGTGACCCGTTTGAGTGGAAGAGGGCCTTGGAGGAGAAGAACTGG AAGTGCGAGCCAGAGAACCT
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: Cytosine-specific methyltransferase MJ0563; M.MjaVIIIP [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MRRAFFDLFSGAGGFALGFEMAGFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSKTIERLVGDVDVVIGSPPCEP YTAANPKREKDPLDRLYKDPVGRLVLHFIRIVGDLKPKVFVMENVKGLIEGPLKDALRREFARVGYPKVYFNVLRAEDYC VPSHRVRVFVSNVPLRPPKCNKVITVEEALRGLPPPNFEWPPNHEPPHVPKRLERRAAKLKWGEALIHYRGSGGKLYPNM IKLHPKKLAPTVLGSSRFFHPYENRLLTVREQARLMGYPDNFIFLGGKDSQYNQVGESVPPPLAKAIAEEALKFL
Sequences:
>Translated_315_residues MRRAFFDLFSGAGGFALGFEMAGFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSKTIERLVGDVDVVIGSPPCEP YTAANPKREKDPLDRLYKDPVGRLVLHFIRIVGDLKPKVFVMENVKGLIEGPLKDALRREFARVGYPKVYFNVLRAEDYC VPSHRVRVFVSNVPLRPPKCNKVITVEEALRGLPPPNFEWPPNHEPPHVPKRLERRAAKLKWGEALIHYRGSGGKLYPNM IKLHPKKLAPTVLGSSRFFHPYENRLLTVREQARLMGYPDNFIFLGGKDSQYNQVGESVPPPLAKAIAEEALKFL >Mature_315_residues MRRAFFDLFSGAGGFALGFEMAGFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSKTIERLVGDVDVVIGSPPCEP YTAANPKREKDPLDRLYKDPVGRLVLHFIRIVGDLKPKVFVMENVKGLIEGPLKDALRREFARVGYPKVYFNVLRAEDYC VPSHRVRVFVSNVPLRPPKCNKVITVEEALRGLPPPNFEWPPNHEPPHVPKRLERRAAKLKWGEALIHYRGSGGKLYPNM IKLHPKKLAPTVLGSSRFFHPYENRLLTVREQARLMGYPDNFIFLGGKDSQYNQVGESVPPPLAKAIAEEALKFL
Specific function: This Methylase Recognizes The Double-Stranded Sequence Ccwgg, Causes Specific Methylation On C-2 On Both Strands. [C]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788271, Length=199, Percent_Identity=27.6381909547739, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 35330; Mature: 35330
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAFFDLFSGAGGFALGFEMAGFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSK CCHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH TIERLVGDVDVVIGSPPCEPYTAANPKREKDPLDRLYKDPVGRLVLHFIRIVGDLKPKVF HHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEE VMENVKGLIEGPLKDALRREFARVGYPKVYFNVLRAEDYCVPSHRVRVFVSNVPLRPPKC EEHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC NKVITVEEALRGLPPPNFEWPPNHEPPHVPKRLERRAAKLKWGEALIHYRGSGGKLYPNM CCEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHH IKLHPKKLAPTVLGSSRFFHPYENRLLTVREQARLMGYPDNFIFLGGKDSQYNQVGESVP HHCCHHHHHHHHHCCCCCCCHHHCCEEEEHHHHHHCCCCCCEEEECCCCCHHHHHHCCCC PPLAKAIAEEALKFL CHHHHHHHHHHHHHC >Mature Secondary Structure MRRAFFDLFSGAGGFALGFEMAGFEGVLGVDNDKAPARSYAANHPKALTLVEDVSKLSSK CCHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH TIERLVGDVDVVIGSPPCEPYTAANPKREKDPLDRLYKDPVGRLVLHFIRIVGDLKPKVF HHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEE VMENVKGLIEGPLKDALRREFARVGYPKVYFNVLRAEDYCVPSHRVRVFVSNVPLRPPKC EEHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCC NKVITVEEALRGLPPPNFEWPPNHEPPHVPKRLERRAAKLKWGEALIHYRGSGGKLYPNM CCEEEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHH IKLHPKKLAPTVLGSSRFFHPYENRLLTVREQARLMGYPDNFIFLGGKDSQYNQVGESVP HHCCHHHHHHHHHCCCCCCCHHHCCEEEEHHHHHHCCCCCCEEEECCCCCHHHHHHCCCC PPLAKAIAEEALKFL CHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]