| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937321
Identifier: 156937321
GI number: 156937321
Start: 470481
End: 471911
Strand: Reverse
Name: 156937321
Synonym: Igni_0528
Alternate gene names: NA
Gene position: 471911-470481 (Counterclockwise)
Preceding gene: 156937322
Following gene: 156937316
Centisome position: 36.37
GC content: 57.23
Gene sequence:
>1431_bases GTGAGCAACCCAGTGGTAGAGTTTCTTGTGACCATATGGTACATAATAAAGCACATGTTCAAGGGCGACTGGAGGGGCTG GACGTGGATATTCGCCATGGCCGGTCTGACCGCCTTCGGCTTGGGTCTCTGGGCCGGCGTACAAGCGGGCCCAGCGATAT ACACCCAGCTGGTCTACCACCTAGGCATGGACCCCAAGCTGTTGGAACAGCTCGGCATTAGCGAGCATAGGGGAGGCATG GTCTACACCGCGTTGGACGACTGGGTCGCGTGGGGCCTCTACATCTCGTTCTTCGTCTTCTGGGTCGGAGTAGCAGCTGC GGGAGTGCTGTTCGGAGTTGCAGCGTACGTCTTCAGGGACAAAGGGTTCATGAGGCTTGCCCCCTTAGCGGAGGTCCAAG CGGTCGCGGCGCTTATAGTGGCGCTACTACTCGTGCTGGTTGACGTCGGCCGGCCCATAAGGACCATACAGCTGCTGGCG CTACCAATAGTAGCCCAGCTCCAGTTCCCCAACCCGCAGTCGATATTCGACTACGACTTCACGGTGCTCAATGGGTACCT CGTGGTCAACTTGATAGGGATACTGATAGCGGTTCACTGGTACCGCAGGGGGCCCAAGTACGCCCCGCCTAAGTGGCTCA TGTACCTATTCATGCTTATCGCGGCGCCGCTGGCCATAGGTATACACACGGTAACGGGATTCATAAGCCAGCCCCTGACG GCGAGGCCTATATGGAACGCCCCTCTGCTGGCCCCGCGCTACGTGGCGACTGCCTTAGCGGCCGGTCCGGCAATGTTATT AATAGTATCTGTGATAGCCGAGAAGTTCTACAAGAAGTTCAAGGTTCCCAACTACGTATACGAAAAGACTTTGATAGCGG CCACCGCCGCCATGATCGTCGGCCTCTACTTCACCTTGTCGGAGGCCCAAGAGCTGTTCTGGTACACTACTGAGCCCCAC AAGAGGGCCCAAGCGATAGGAATATTCAACTTCGCCGTCATGCCGTTCTGCGCGCTAATGAAGCCGATACTCAAGGACTT CGCGGTGTTCTTCAGCGGCACCAACTTCAACGGCTGCAGCTGGGGCTACCCCGGCATGGAGTACTTGGCCCTAATGAACT TCTTCTGGATAGTCGTCGGCTCGCTGGCCGTAATACTAACCATATTCGTGCCGAGGCTGAGGAAGACGCGCAAGGGCGTA GTCTTCTTGAGCGCCTTGATAATACTGGCGGTGGTAGGTGAGAAGACTCTGCCGATAGTCATACCGGGCTACACCCCGGA CGTGCTGGGCAAGCTGGCGATCTACTACCCGACCCCCATGGAGTGGGCCTTGACCGTTGCGGCCCACGCGGCGGGCATGA TGGTTTACATGCTGTTGGCGAGACCGGTCATAAGAGCTGTTATCGCTCATTACGGCGAAGAGGAACACTAA
Upstream 100 bases:
>100_bases CTGGGCACCCCGAAGCACGGCGAAGGGACTCACCACGGAAGTAGAGAAAAAGCAGAGGAGAGGGGTCACGACTGAGGAGC GACGGAGGAGGTGAGGGGCA
Downstream 100 bases:
>100_bases CCAACACTCCCCTTTTCGCCCTCAAAGCCTTTTTGATCTTCACGATCGCCCTCCCCGTGCAAAAGGCTTCAAAGCCCTCC TCCACTTCCTCTAGGCATTG
Product: polysulphide reductase, NrfD
Products: NA
Alternate protein names: Reductase Transmembrane Subunit; Polysulfide Reductase Subunit C; Hme Subunit B; Molybdopterin Oxidoreductase Membrane Subunit; Polysulphide Reductase
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSNPVVEFLVTIWYIIKHMFKGDWRGWTWIFAMAGLTAFGLGLWAGVQAGPAIYTQLVYHLGMDPKLLEQLGISEHRGGM VYTALDDWVAWGLYISFFVFWVGVAAAGVLFGVAAYVFRDKGFMRLAPLAEVQAVAALIVALLLVLVDVGRPIRTIQLLA LPIVAQLQFPNPQSIFDYDFTVLNGYLVVNLIGILIAVHWYRRGPKYAPPKWLMYLFMLIAAPLAIGIHTVTGFISQPLT ARPIWNAPLLAPRYVATALAAGPAMLLIVSVIAEKFYKKFKVPNYVYEKTLIAATAAMIVGLYFTLSEAQELFWYTTEPH KRAQAIGIFNFAVMPFCALMKPILKDFAVFFSGTNFNGCSWGYPGMEYLALMNFFWIVVGSLAVILTIFVPRLRKTRKGV VFLSALIILAVVGEKTLPIVIPGYTPDVLGKLAIYYPTPMEWALTVAAHAAGMMVYMLLARPVIRAVIAHYGEEEH
Sequences:
>Translated_476_residues MSNPVVEFLVTIWYIIKHMFKGDWRGWTWIFAMAGLTAFGLGLWAGVQAGPAIYTQLVYHLGMDPKLLEQLGISEHRGGM VYTALDDWVAWGLYISFFVFWVGVAAAGVLFGVAAYVFRDKGFMRLAPLAEVQAVAALIVALLLVLVDVGRPIRTIQLLA LPIVAQLQFPNPQSIFDYDFTVLNGYLVVNLIGILIAVHWYRRGPKYAPPKWLMYLFMLIAAPLAIGIHTVTGFISQPLT ARPIWNAPLLAPRYVATALAAGPAMLLIVSVIAEKFYKKFKVPNYVYEKTLIAATAAMIVGLYFTLSEAQELFWYTTEPH KRAQAIGIFNFAVMPFCALMKPILKDFAVFFSGTNFNGCSWGYPGMEYLALMNFFWIVVGSLAVILTIFVPRLRKTRKGV VFLSALIILAVVGEKTLPIVIPGYTPDVLGKLAIYYPTPMEWALTVAAHAAGMMVYMLLARPVIRAVIAHYGEEEH >Mature_475_residues SNPVVEFLVTIWYIIKHMFKGDWRGWTWIFAMAGLTAFGLGLWAGVQAGPAIYTQLVYHLGMDPKLLEQLGISEHRGGMV YTALDDWVAWGLYISFFVFWVGVAAAGVLFGVAAYVFRDKGFMRLAPLAEVQAVAALIVALLLVLVDVGRPIRTIQLLAL PIVAQLQFPNPQSIFDYDFTVLNGYLVVNLIGILIAVHWYRRGPKYAPPKWLMYLFMLIAAPLAIGIHTVTGFISQPLTA RPIWNAPLLAPRYVATALAAGPAMLLIVSVIAEKFYKKFKVPNYVYEKTLIAATAAMIVGLYFTLSEAQELFWYTTEPHK RAQAIGIFNFAVMPFCALMKPILKDFAVFFSGTNFNGCSWGYPGMEYLALMNFFWIVVGSLAVILTIFVPRLRKTRKGVV FLSALIILAVVGEKTLPIVIPGYTPDVLGKLAIYYPTPMEWALTVAAHAAGMMVYMLLARPVIRAVIAHYGEEEH
Specific function: Unknown
COG id: COG5557
COG function: function code C; Polysulphide reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52962; Mature: 52831
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00527 RIBOSOMAL_S14
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPVVEFLVTIWYIIKHMFKGDWRGWTWIFAMAGLTAFGLGLWAGVQAGPAIYTQLVYH CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LGMDPKLLEQLGISEHRGGMVYTALDDWVAWGLYISFFVFWVGVAAAGVLFGVAAYVFRD HCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGFMRLAPLAEVQAVAALIVALLLVLVDVGRPIRTIQLLALPIVAQLQFPNPQSIFDYDF CCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH TVLNGYLVVNLIGILIAVHWYRRGPKYAPPKWLMYLFMLIAAPLAIGIHTVTGFISQPLT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ARPIWNAPLLAPRYVATALAAGPAMLLIVSVIAEKFYKKFKVPNYVYEKTLIAATAAMIV CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLYFTLSEAQELFWYTTEPHKRAQAIGIFNFAVMPFCALMKPILKDFAVFFSGTNFNGCS HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WGYPGMEYLALMNFFWIVVGSLAVILTIFVPRLRKTRKGVVFLSALIILAVVGEKTLPIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IPGYTPDVLGKLAIYYPTPMEWALTVAAHAAGMMVYMLLARPVIRAVIAHYGEEEH ECCCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNPVVEFLVTIWYIIKHMFKGDWRGWTWIFAMAGLTAFGLGLWAGVQAGPAIYTQLVYH CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LGMDPKLLEQLGISEHRGGMVYTALDDWVAWGLYISFFVFWVGVAAAGVLFGVAAYVFRD HCCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KGFMRLAPLAEVQAVAALIVALLLVLVDVGRPIRTIQLLALPIVAQLQFPNPQSIFDYDF CCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCH TVLNGYLVVNLIGILIAVHWYRRGPKYAPPKWLMYLFMLIAAPLAIGIHTVTGFISQPLT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ARPIWNAPLLAPRYVATALAAGPAMLLIVSVIAEKFYKKFKVPNYVYEKTLIAATAAMIV CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLYFTLSEAQELFWYTTEPHKRAQAIGIFNFAVMPFCALMKPILKDFAVFFSGTNFNGCS HHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WGYPGMEYLALMNFFWIVVGSLAVILTIFVPRLRKTRKGVVFLSALIILAVVGEKTLPIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IPGYTPDVLGKLAIYYPTPMEWALTVAAHAAGMMVYMLLARPVIRAVIAHYGEEEH ECCCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA