| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937193
Identifier: 156937193
GI number: 156937193
Start: 352643
End: 353479
Strand: Reverse
Name: 156937193
Synonym: Igni_0399
Alternate gene names: NA
Gene position: 353479-352643 (Counterclockwise)
Preceding gene: 156937194
Following gene: 156937190
Centisome position: 27.24
GC content: 59.62
Gene sequence:
>837_bases TTGAGGGCCGTGGTGCTCGCAGGGGGGAACAGGGTAAAGAGGTTCAAGACGTACTTCTTAGGGAAGATGGTCGTCGAATA CCCCCTAAAAGCCTTGGAAAAGGTCTACGACGTAGCCTTGCTCACCTCCGGCTGGACCTTGGACGGTTACGAAACTGTGG TCCAGAGGACCCCCGGGGTCTTGGGGGCGATAAGGGACGCGGCGGAGGAGCTGGGCTTGCCCTTGCTCGTCTCCTACGGC GACGTGGTGGCGGAGGAGGGCTTCTACACCTCTTTGGACTCCCCATGCAGCGTGGCCGCAGTCGCTTCCGTGCCCTCCTC TCGACACGGGAAGATAGGGGGGCCGCAGAGCAGCTACGTCTTCGGGGGGCTCTTGAGCTTAGATGAGGAATGCTTTGAGA AAATAATGGAAATCGGCGACCTCGCCGGAGCTTTGAACGAGCTGATTAATAGCGGAATAATGAGCGTAAAGAGGTTCGAC GGCGTGTGGCACGACGTGGACGAGCCTTCGGACGTGTTGAAAATGTTTGAAGACTTCTTCAGGTACTTAAGTTCCGGCTA CAGTAAGGTCGCAATCGACCTCGAGGGGGTCCACCTCAAGGGGCCGGTAATAGTGGAGCCCGGGGCAACTGTGGAGCCCG GGGCGACCTTGATAGGGCCCGCCTTCGTAGGCTCCGGGGCGTTCGTGGAGTCCCAAGCGGTGGTCAAGAGGTCTTCGGTG GAGCCCGGGGCAACCGTGGAGAGCTTCGCCTACGTAAGGGGGAGCAGCGTCCAGCCCGGGGCGGTGGCCGAGAGCTACAA GAAGTACGTGGGCGCGGTGGTTGAGAAAAACTTATAA
Upstream 100 bases:
>100_bases CTGAGGAGCTCGAGGCGCTGTGCGACCCCAGCAGTTACTTGGGAAAGGCTAGAGAGTTGATAGCTAGGACAGCGAAGTAC GTCGAGGAGGTAGTAGGCCT
Downstream 100 bases:
>100_bases ACTGTTTTAGGATCCCTCCCTCGGAGCCGGGCGCGAGGTGGGCCGGTAGCTCAGCCTGGAAGAGCGCCCGGTTGGCAACC GGGAGGTCCCGGGTTCAAGT
Product: nucleoside-diphosphate-sugar pyrophosphorylase-like protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Pyrophosphorylase-Like Protein; Sugar-Phosphate Nucleotidyl Transferase
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MRAVVLAGGNRVKRFKTYFLGKMVVEYPLKALEKVYDVALLTSGWTLDGYETVVQRTPGVLGAIRDAAEELGLPLLVSYG DVVAEEGFYTSLDSPCSVAAVASVPSSRHGKIGGPQSSYVFGGLLSLDEECFEKIMEIGDLAGALNELINSGIMSVKRFD GVWHDVDEPSDVLKMFEDFFRYLSSGYSKVAIDLEGVHLKGPVIVEPGATVEPGATLIGPAFVGSGAFVESQAVVKRSSV EPGATVESFAYVRGSSVQPGAVAESYKKYVGAVVEKNL
Sequences:
>Translated_278_residues MRAVVLAGGNRVKRFKTYFLGKMVVEYPLKALEKVYDVALLTSGWTLDGYETVVQRTPGVLGAIRDAAEELGLPLLVSYG DVVAEEGFYTSLDSPCSVAAVASVPSSRHGKIGGPQSSYVFGGLLSLDEECFEKIMEIGDLAGALNELINSGIMSVKRFD GVWHDVDEPSDVLKMFEDFFRYLSSGYSKVAIDLEGVHLKGPVIVEPGATVEPGATLIGPAFVGSGAFVESQAVVKRSSV EPGATVESFAYVRGSSVQPGAVAESYKKYVGAVVEKNL >Mature_278_residues MRAVVLAGGNRVKRFKTYFLGKMVVEYPLKALEKVYDVALLTSGWTLDGYETVVQRTPGVLGAIRDAAEELGLPLLVSYG DVVAEEGFYTSLDSPCSVAAVASVPSSRHGKIGGPQSSYVFGGLLSLDEECFEKIMEIGDLAGALNELINSGIMSVKRFD GVWHDVDEPSDVLKMFEDFFRYLSSGYSKVAIDLEGVHLKGPVIVEPGATVEPGATLIGPAFVGSGAFVESQAVVKRSSV EPGATVESFAYVRGSSVQPGAVAESYKKYVGAVVEKNL
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29617; Mature: 29617
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVVLAGGNRVKRFKTYFLGKMVVEYPLKALEKVYDVALLTSGWTLDGYETVVQRTPGV CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH LGAIRDAAEELGLPLLVSYGDVVAEEGFYTSLDSPCSVAAVASVPSSRHGKIGGPQSSYV HHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHH FGGLLSLDEECFEKIMEIGDLAGALNELINSGIMSVKRFDGVWHDVDEPSDVLKMFEDFF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RYLSSGYSKVAIDLEGVHLKGPVIVEPGATVEPGATLIGPAFVGSGAFVESQAVVKRSSV HHHHCCCCEEEEEEECEEECCCEEECCCCCCCCCCCEECHHHHCCCCCCHHHHHHHHCCC EPGATVESFAYVRGSSVQPGAVAESYKKYVGAVVEKNL CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRAVVLAGGNRVKRFKTYFLGKMVVEYPLKALEKVYDVALLTSGWTLDGYETVVQRTPGV CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCH LGAIRDAAEELGLPLLVSYGDVVAEEGFYTSLDSPCSVAAVASVPSSRHGKIGGPQSSYV HHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHH FGGLLSLDEECFEKIMEIGDLAGALNELINSGIMSVKRFDGVWHDVDEPSDVLKMFEDFF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RYLSSGYSKVAIDLEGVHLKGPVIVEPGATVEPGATLIGPAFVGSGAFVESQAVVKRSSV HHHHCCCCEEEEEEECEEECCCEEECCCCCCCCCCCEECHHHHCCCCCCHHHHHHHHCCC EPGATVESFAYVRGSSVQPGAVAESYKKYVGAVVEKNL CCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA