| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is hflX [C]
Identifier: 156937077
GI number: 156937077
Start: 242430
End: 243548
Strand: Reverse
Name: hflX [C]
Synonym: Igni_0283
Alternate gene names: 156937077
Gene position: 243548-242430 (Counterclockwise)
Preceding gene: 156937086
Following gene: 156937076
Centisome position: 18.77
GC content: 57.02
Gene sequence:
>1119_bases GTGGCTTGTAAGAAGAGGGCTGACTTCCAAGAGGCCTTGGCCCTCTGCGAGACCGCGGGCTACGAGGTGGTCGCTACCGT TAACTTCTGTAAGAAGCCGCACCCGGCCACTTACATAACGCCGGGGAAGCTGGAGGAGCTGAAGGCTACAATTAAGGAGG GCGGGGCAGAGGCAGTAATAGTTTACGGGAACCCCAAGCCCTCCCAGTTCTACAGGCTCAAGAAGGAGCTGGGCGTGGAG GTCGTCGACCGCACCAGCTTGATACTGAAGATTTTCGAACTCCACGCCGGGAGCAAGGAGGCCAAGCTCCAAACGGAGCT GGCCAGGCTGAAGTACGAACTGACGTTGGCGAGGGAGTACGTAAGGAGAGTGAAGATGGGCGAGCAAGTGGACTTCTTGG GCCCGGGCGAGTACGCGGCCAAGTACGTCATAAAGGCAATAAAAAGGAGGATAAAGAAGATAGAGGAAGAGCTCGAAAAG ATAAGGACGATGAGGGAACAACAGAAGCTCCGCAGAGTGAAGCGCTTGCGCGTGCCGGAGGTGGCGGTAACCGGCTACAC GTGCGCGGGGAAGACCGCTCTGGTCAACGCGCTGGGCAAGCTTAACTTGAAGGAAGGGCCTGAGATGTTCACCACCTTGG CCCCCAAGCACGTGAGGGTGAGCGTGTACGAGAACGGCTTGTACGAGGCTATATTCATTGATACGGTCGGCTTCATAGAG GGCATACCGCCGCAGATACTGGAGGTCTTCCACGCGACGCTCGCCGAGATAACTTATTCCGACGCCGCCGTCTTGGTCCT CGACGGGAGCGAGGAGCTGAGCAGGGCGTTGGACAAGCTCGAGAGCAGCTTGGCTACTTTGGCGGAGATAGGCTTCATTG GGAAGCCCTTGGTAATAGCGTTCAACAAAATAGACTTGGTGGACGACTACGAAGAGAAGGTCTTGGAAGTGGACGACTGG GCGAGGAGCCTATACCCTTGGACATGGGGGACCGTTCCCATATCCGCGAAGAAGGGGACCAACTTGAGGCGTCTCGTAAT AGAAAGCGTGTTGGCCGCGCGGGGAGCCCGGAATATAAAAGAACCGGAGACTAACGTCTGCGGGAAGGGGGCTTGTTGA
Upstream 100 bases:
>100_bases AGCTATTTAAGTACCTTCAAGGTCCGCGGGCCGCCCGGGGCGATAACTTAAAGAGGCTAAAGGGAGCGCCCGCGGGTGGT TTCGCTCGAAGGCGGCTCTC
Downstream 100 bases:
>100_bases AGAAGAACTTATTGTTAGAGGCCCTCCTCTCCCTCGACGGGAAGGCTGACGTCAAGTCCGTATACGAATACGTAAAGGCG AGGGAGCCCAACATAACCCA
Product: GTP-binding protein, HSR1-related
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MACKKRADFQEALALCETAGYEVVATVNFCKKPHPATYITPGKLEELKATIKEGGAEAVIVYGNPKPSQFYRLKKELGVE VVDRTSLILKIFELHAGSKEAKLQTELARLKYELTLAREYVRRVKMGEQVDFLGPGEYAAKYVIKAIKRRIKKIEEELEK IRTMREQQKLRRVKRLRVPEVAVTGYTCAGKTALVNALGKLNLKEGPEMFTTLAPKHVRVSVYENGLYEAIFIDTVGFIE GIPPQILEVFHATLAEITYSDAAVLVLDGSEELSRALDKLESSLATLAEIGFIGKPLVIAFNKIDLVDDYEEKVLEVDDW ARSLYPWTWGTVPISAKKGTNLRRLVIESVLAARGARNIKEPETNVCGKGAC
Sequences:
>Translated_372_residues MACKKRADFQEALALCETAGYEVVATVNFCKKPHPATYITPGKLEELKATIKEGGAEAVIVYGNPKPSQFYRLKKELGVE VVDRTSLILKIFELHAGSKEAKLQTELARLKYELTLAREYVRRVKMGEQVDFLGPGEYAAKYVIKAIKRRIKKIEEELEK IRTMREQQKLRRVKRLRVPEVAVTGYTCAGKTALVNALGKLNLKEGPEMFTTLAPKHVRVSVYENGLYEAIFIDTVGFIE GIPPQILEVFHATLAEITYSDAAVLVLDGSEELSRALDKLESSLATLAEIGFIGKPLVIAFNKIDLVDDYEEKVLEVDDW ARSLYPWTWGTVPISAKKGTNLRRLVIESVLAARGARNIKEPETNVCGKGAC >Mature_371_residues ACKKRADFQEALALCETAGYEVVATVNFCKKPHPATYITPGKLEELKATIKEGGAEAVIVYGNPKPSQFYRLKKELGVEV VDRTSLILKIFELHAGSKEAKLQTELARLKYELTLAREYVRRVKMGEQVDFLGPGEYAAKYVIKAIKRRIKKIEEELEKI RTMREQQKLRRVKRLRVPEVAVTGYTCAGKTALVNALGKLNLKEGPEMFTTLAPKHVRVSVYENGLYEAIFIDTVGFIEG IPPQILEVFHATLAEITYSDAAVLVLDGSEELSRALDKLESSLATLAEIGFIGKPLVIAFNKIDLVDDYEEKVLEVDDWA RSLYPWTWGTVPISAKKGTNLRRLVIESVLAARGARNIKEPETNVCGKGAC
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310124267, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310124171, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310124169, Length=233, Percent_Identity=28.755364806867, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI310133118, Length=234, Percent_Identity=28.6324786324786, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI310133116, Length=234, Percent_Identity=28.6324786324786, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1790615, Length=313, Percent_Identity=32.5878594249201, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17561038, Length=371, Percent_Identity=28.0323450134771, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24650079, Length=292, Percent_Identity=31.8493150684932, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 41519; Mature: 41388
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACKKRADFQEALALCETAGYEVVATVNFCKKPHPATYITPGKLEELKATIKEGGAEAVI CCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCCCCEECCCHHHHHHHHHHCCCCCEEE VYGNPKPSQFYRLKKELGVEVVDRTSLILKIFELHAGSKEAKLQTELARLKYELTLAREY EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VRRVKMGEQVDFLGPGEYAAKYVIKAIKRRIKKIEEELEKIRTMREQQKLRRVKRLRVPE HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVTGYTCAGKTALVNALGKLNLKEGPEMFTTLAPKHVRVSVYENGLYEAIFIDTVGFIE EEEECEECCCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHC GIPPQILEVFHATLAEITYSDAAVLVLDGSEELSRALDKLESSLATLAEIGFIGKPLVIA CCCHHHHHHHHHHHHHHEECCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE FNKIDLVDDYEEKVLEVDDWARSLYPWTWGTVPISAKKGTNLRRLVIESVLAARGARNIK EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCC EPETNVCGKGAC CCCCCCCCCCCC >Mature Secondary Structure ACKKRADFQEALALCETAGYEVVATVNFCKKPHPATYITPGKLEELKATIKEGGAEAVI CCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCCCCEECCCHHHHHHHHHHCCCCCEEE VYGNPKPSQFYRLKKELGVEVVDRTSLILKIFELHAGSKEAKLQTELARLKYELTLAREY EECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VRRVKMGEQVDFLGPGEYAAKYVIKAIKRRIKKIEEELEKIRTMREQQKLRRVKRLRVPE HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VAVTGYTCAGKTALVNALGKLNLKEGPEMFTTLAPKHVRVSVYENGLYEAIFIDTVGFIE EEEECEECCCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEECCCCEEEHHHHHHHHHC GIPPQILEVFHATLAEITYSDAAVLVLDGSEELSRALDKLESSLATLAEIGFIGKPLVIA CCCHHHHHHHHHHHHHHEECCEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE FNKIDLVDDYEEKVLEVDDWARSLYPWTWGTVPISAKKGTNLRRLVIESVLAARGARNIK EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCC EPETNVCGKGAC CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]