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The map label for this gene is 156937036

Identifier: 156937036

GI number: 156937036

Start: 208860

End: 209297

Strand: Reverse

Name: 156937036

Synonym: Igni_0241

Alternate gene names: NA

Gene position: 209297-208860 (Counterclockwise)

Preceding gene: 156937037

Following gene: 156937035

Centisome position: 16.13

GC content: 60.96

Gene sequence:

>438_bases
TTGAAGAAGGTATTCGTCGTCGCACATGCGCCCACGAGCGTCCAACGCTTAGAGGACTTGGCCAAGCTCGCCTTCGGTTT
CGGGGAGCCCGTGAGCGGACTCGTGGTCACGAAGCCCTCGGGCGCCGCGGCACAGATAGGCGTCCCAGAGGTGAGCAAGT
TGGCGTACAAACTGGACAAGGCGTTTTTCGTCTTCCCAGACATAGACGACGCGTTGGAGTTGCTGAAGCCCCAGAGGGTG
TACACGGTCTCAAGGGAGTACGGCGAGGAAGTGGAGCGCGTGGAGGCGGAGGGCGTAACCCTAGTCGTGGTGGGCGCCAG
CGAGCCCGGGCTCAGCAAGCTAGAGGCCTCTAAGGGGAAGGCAATTTACCCTAAGGGCTTGGAGGGCGAGATAGGCCCTA
TAGGCGCCGCGGCCTTAATTTTGGCGGGCTTGAAATGA

Upstream 100 bases:

>100_bases
CTAAGACCTACAACAATTTAGGGGAGTTCGTTGAAGACCTTATAAAGGGCGGCGACGCAATCAAGATTTAAGTCCCTTAG
AGGGGTCGGCCCAGAGAACC

Downstream 100 bases:

>100_bases
TAGAGAGGGTAGAAGTAACCGTTATAATACACGCGACCGAAGACCCCGAAAAGGTCATGGAATCCGTATTCAACTTGTTG
GGTCTTAATAAAGAGGACGT

Product: exonuclease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKKVFVVAHAPTSVQRLEDLAKLAFGFGEPVSGLVVTKPSGAAAQIGVPEVSKLAYKLDKAFFVFPDIDDALELLKPQRV
YTVSREYGEEVERVEAEGVTLVVVGASEPGLSKLEASKGKAIYPKGLEGEIGPIGAAALILAGLK

Sequences:

>Translated_145_residues
MKKVFVVAHAPTSVQRLEDLAKLAFGFGEPVSGLVVTKPSGAAAQIGVPEVSKLAYKLDKAFFVFPDIDDALELLKPQRV
YTVSREYGEEVERVEAEGVTLVVVGASEPGLSKLEASKGKAIYPKGLEGEIGPIGAAALILAGLK
>Mature_145_residues
MKKVFVVAHAPTSVQRLEDLAKLAFGFGEPVSGLVVTKPSGAAAQIGVPEVSKLAYKLDKAFFVFPDIDDALELLKPQRV
YTVSREYGEEVERVEAEGVTLVVVGASEPGLSKLEASKGKAIYPKGLEGEIGPIGAAALILAGLK

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.pernix APE2001 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018665 [H]

Pfam domain/function: PF09895 DUF2122 [H]

EC number: NA

Molecular weight: Translated: 15265; Mature: 15265

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVFVVAHAPTSVQRLEDLAKLAFGFGEPVSGLVVTKPSGAAAQIGVPEVSKLAYKLDK
CCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHCC
AFFVFPDIDDALELLKPQRVYTVSREYGEEVERVEAEGVTLVVVGASEPGLSKLEASKGK
EEEEECCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCC
AIYPKGLEGEIGPIGAAALILAGLK
EECCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKVFVVAHAPTSVQRLEDLAKLAFGFGEPVSGLVVTKPSGAAAQIGVPEVSKLAYKLDK
CCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCCHHHHHHHHHCC
AFFVFPDIDDALELLKPQRVYTVSREYGEEVERVEAEGVTLVVVGASEPGLSKLEASKGK
EEEEECCHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCCC
AIYPKGLEGEIGPIGAAALILAGLK
EECCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]