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The map label for this gene is 156936940

Identifier: 156936940

GI number: 156936940

Start: 129973

End: 131652

Strand: Reverse

Name: 156936940

Synonym: Igni_0145

Alternate gene names: NA

Gene position: 131652-129973 (Counterclockwise)

Preceding gene: 156936944

Following gene: 156936935

Centisome position: 10.15

GC content: 55.83

Gene sequence:

>1680_bases
ATGAAGCTGAGGAGCTACCAGTTGAGGGCTTTGGACATAGCACTGAGAATGAAAAGATGTGTAATCGTTATGCCGACCGG
TTCCGGGAAGACCGTTGTGGCCGGAGCTTGGCTTAAGGAACTCTTCGAGAGGGGCGAAATACGCAAGGCCTTGGTCCTAG
AGCCCACCAGGATACTCGTAGAACAGAATTCGCTGCTTTTGAGAAACGCGTTCTCTTTGAACGCTATGCCCTTACACGGG
AAAAAGACGAAAGCCCAAAAGTTGGAGGCCGTGAAGGCGGAGGTGGTCGTCGCCACCCCGGAGGAGGCGGAGCTGTGGCT
GGCGGAGCTCTCCAATTCCGACGCACTGGTGGTCGACGAATGCCACCACACCAGCGGAAAGGACCCTTACGTGAAGGTTG
TCAAGTCCGTCAAGGCCGAGTGGCGCTTGGGTCTGAGCGCCTTTATACCTCCGAAAAGGAGAAGCATTATAGAGAAGTAC
ATAGGCCCGATAATCGAGATCCCGTGGAGCGACGAGGAAGTGCGCAAGTACGTGCCCCCGTACATAGGCGAGGTTTACGA
GGCCCCCTTGCCGGAGAGCTGCATGAAGCTCTACGAGGCCCTCAAGTCGCGTTGGCCCAGCTCGGACAAGAAGACGCGAC
TCCTGATATCCTTAGCCTTGAGGTTCCTCGCTCGCGACGGGCCGATGGCCCTCCGAGAGTCCTCTAAGGGGGAGGGCGCC
TTAGCGCGGCTCCTCAAGGAGTACTCGCAACAAATAGAGAAGTGCTATGAGGAGGCGCCGTTACACAAGCTCCCGGCCCT
CACGAGGGTCTTGGACGACCACGTGTACGAAAAGGCCCTAGTCTTTGTAGATAGGGTCAGCATAGCCCTAGCGGTCGCGA
AGGAGCTGGGGGCCCTCCCCCTCACCAGCAAGAGTAAGGGAAGGCTTGAAGATTTGAAAAGCGCTAAGGTGATCGTCGCC
ACTTCGGCTGGGGAGGAGGGGTTAGATCTACCAGAGATAGACTTGCTCGTCATTTGGAGCAACACTTCCTCCGCGCTGCG
CCTCATACAGAGGATAGGGAGGCTTCTTAGGCCTAAGGGCGACAAAAAGGTGAAGTTCCTAACGTTCATAGTAACTCCGG
ATACAATAGACGTTGACTTGTTAATAGAGGGATTAGAAGTAGCCAAGAAGGTAGGTGTAGACCCCAACGTGGATCCGGAG
GTCTTGAGGAAACTGTTAAAGGTCTCGAGCGTCGGCGGGGTGCTCGAGGTCCTTCGCGGGAGGGCGCTTCCGGAAGACCT
AATAGCCGAGCTCTCCTCGCTTCCCCTTTCTCGCGTTAAGAGGCTTCTGAGGAAGATGGGCGAAGAGGGGATAGCGGCTT
ACGTCTACTCCCCCTACGGCAAGCTGTGGTTCTTGCAAGAGGAAGCTGAAGCGGTTGGGGAGGAGCTGAAGGAGCTGCTC
GAACCGTTAGAGGGGGCGACGCTGGCCATAGAAGAGCTGGGCTTGAGGGGAAAGCTCGAACAAGTGATAGAGCGTCTGAA
GGGGTTGCTCCCCGCGGGCCCCCTTACGGTTAAGGTGAGGGCTAGGACAGGGTCCATGGAAATTTTTGACGTACGAAAAT
ACAATTTCGTGGTAAGCAACGAAAAGGTGGCAGAAATTGTGTTGAGGAACGCTACCTCCAAGAGGTTGTTGCTCGGTTGA

Upstream 100 bases:

>100_bases
CTTCTATAGCGTAGCTCACAGAGACTCCCGCGCGGTTGAGAGGAAGGCGCTAAAAAGTGTGGATACCGCACCTAAACTCG
ACTAGAGGGGATTGAAAACT

Downstream 100 bases:

>100_bases
GCGACTCCTCAGAGCTTGCTGGCCGCGGGCGCCTTTCCCTTAACGACCAAGACGCTCCTGTTACACGTTAAGAGCACTCT
AGTGGACACGCTGCCCAAGA

Product: DEAD/DEAH box helicase

Products: NA

Alternate protein names: DEAD/DEAH Box Helicase Domain-Containing Protein

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MKLRSYQLRALDIALRMKRCVIVMPTGSGKTVVAGAWLKELFERGEIRKALVLEPTRILVEQNSLLLRNAFSLNAMPLHG
KKTKAQKLEAVKAEVVVATPEEAELWLAELSNSDALVVDECHHTSGKDPYVKVVKSVKAEWRLGLSAFIPPKRRSIIEKY
IGPIIEIPWSDEEVRKYVPPYIGEVYEAPLPESCMKLYEALKSRWPSSDKKTRLLISLALRFLARDGPMALRESSKGEGA
LARLLKEYSQQIEKCYEEAPLHKLPALTRVLDDHVYEKALVFVDRVSIALAVAKELGALPLTSKSKGRLEDLKSAKVIVA
TSAGEEGLDLPEIDLLVIWSNTSSALRLIQRIGRLLRPKGDKKVKFLTFIVTPDTIDVDLLIEGLEVAKKVGVDPNVDPE
VLRKLLKVSSVGGVLEVLRGRALPEDLIAELSSLPLSRVKRLLRKMGEEGIAAYVYSPYGKLWFLQEEAEAVGEELKELL
EPLEGATLAIEELGLRGKLEQVIERLKGLLPAGPLTVKVRARTGSMEIFDVRKYNFVVSNEKVAEIVLRNATSKRLLLG

Sequences:

>Translated_559_residues
MKLRSYQLRALDIALRMKRCVIVMPTGSGKTVVAGAWLKELFERGEIRKALVLEPTRILVEQNSLLLRNAFSLNAMPLHG
KKTKAQKLEAVKAEVVVATPEEAELWLAELSNSDALVVDECHHTSGKDPYVKVVKSVKAEWRLGLSAFIPPKRRSIIEKY
IGPIIEIPWSDEEVRKYVPPYIGEVYEAPLPESCMKLYEALKSRWPSSDKKTRLLISLALRFLARDGPMALRESSKGEGA
LARLLKEYSQQIEKCYEEAPLHKLPALTRVLDDHVYEKALVFVDRVSIALAVAKELGALPLTSKSKGRLEDLKSAKVIVA
TSAGEEGLDLPEIDLLVIWSNTSSALRLIQRIGRLLRPKGDKKVKFLTFIVTPDTIDVDLLIEGLEVAKKVGVDPNVDPE
VLRKLLKVSSVGGVLEVLRGRALPEDLIAELSSLPLSRVKRLLRKMGEEGIAAYVYSPYGKLWFLQEEAEAVGEELKELL
EPLEGATLAIEELGLRGKLEQVIERLKGLLPAGPLTVKVRARTGSMEIFDVRKYNFVVSNEKVAEIVLRNATSKRLLLG
>Mature_559_residues
MKLRSYQLRALDIALRMKRCVIVMPTGSGKTVVAGAWLKELFERGEIRKALVLEPTRILVEQNSLLLRNAFSLNAMPLHG
KKTKAQKLEAVKAEVVVATPEEAELWLAELSNSDALVVDECHHTSGKDPYVKVVKSVKAEWRLGLSAFIPPKRRSIIEKY
IGPIIEIPWSDEEVRKYVPPYIGEVYEAPLPESCMKLYEALKSRWPSSDKKTRLLISLALRFLARDGPMALRESSKGEGA
LARLLKEYSQQIEKCYEEAPLHKLPALTRVLDDHVYEKALVFVDRVSIALAVAKELGALPLTSKSKGRLEDLKSAKVIVA
TSAGEEGLDLPEIDLLVIWSNTSSALRLIQRIGRLLRPKGDKKVKFLTFIVTPDTIDVDLLIEGLEVAKKVGVDPNVDPE
VLRKLLKVSSVGGVLEVLRGRALPEDLIAELSSLPLSRVKRLLRKMGEEGIAAYVYSPYGKLWFLQEEAEAVGEELKELL
EPLEGATLAIEELGLRGKLEQVIERLKGLLPAGPLTVKVRARTGSMEIFDVRKYNFVVSNEKVAEIVLRNATSKRLLLG

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62262; Mature: 62262

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRSYQLRALDIALRMKRCVIVMPTGSGKTVVAGAWLKELFERGEIRKALVLEPTRILV
CCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCHHHEECCHHHEE
EQNSLLLRNAFSLNAMPLHGKKTKAQKLEAVKAEVVVATPEEAELWLAELSNSDALVVDE
ECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCEEEEEC
CHHTSGKDPYVKVVKSVKAEWRLGLSAFIPPKRRSIIEKYIGPIIEIPWSDEEVRKYVPP
CCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCEEECCCCHHHHHHHCCH
YIGEVYEAPLPESCMKLYEALKSRWPSSDKKTRLLISLALRFLARDGPMALRESSKGEGA
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHH
LARLLKEYSQQIEKCYEEAPLHKLPALTRVLDDHVYEKALVFVDRVSIALAVAKELGALP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTSKSKGRLEDLKSAKVIVATSAGEEGLDLPEIDLLVIWSNTSSALRLIQRIGRLLRPKG
CCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
DKKVKFLTFIVTPDTIDVDLLIEGLEVAKKVGVDPNVDPEVLRKLLKVSSVGGVLEVLRG
CCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
RALPEDLIAELSSLPLSRVKRLLRKMGEEGIAAYVYSPYGKLWFLQEEAEAVGEELKELL
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHH
EPLEGATLAIEELGLRGKLEQVIERLKGLLPAGPLTVKVRARTGSMEIFDVRKYNFVVSN
HHHCCCEEEHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECC
EKVAEIVLRNATSKRLLLG
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLRSYQLRALDIALRMKRCVIVMPTGSGKTVVAGAWLKELFERGEIRKALVLEPTRILV
CCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEHHHHHHHHHCCCCCHHHEECCHHHEE
EQNSLLLRNAFSLNAMPLHGKKTKAQKLEAVKAEVVVATPEEAELWLAELSNSDALVVDE
ECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCEEEEEC
CHHTSGKDPYVKVVKSVKAEWRLGLSAFIPPKRRSIIEKYIGPIIEIPWSDEEVRKYVPP
CCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCEEECCCCHHHHHHHCCH
YIGEVYEAPLPESCMKLYEALKSRWPSSDKKTRLLISLALRFLARDGPMALRESSKGEGA
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCHH
LARLLKEYSQQIEKCYEEAPLHKLPALTRVLDDHVYEKALVFVDRVSIALAVAKELGALP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LTSKSKGRLEDLKSAKVIVATSAGEEGLDLPEIDLLVIWSNTSSALRLIQRIGRLLRPKG
CCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
DKKVKFLTFIVTPDTIDVDLLIEGLEVAKKVGVDPNVDPEVLRKLLKVSSVGGVLEVLRG
CCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
RALPEDLIAELSSLPLSRVKRLLRKMGEEGIAAYVYSPYGKLWFLQEEAEAVGEELKELL
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHH
EPLEGATLAIEELGLRGKLEQVIERLKGLLPAGPLTVKVRARTGSMEIFDVRKYNFVVSN
HHHCCCEEEHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEEEEEECC
EKVAEIVLRNATSKRLLLG
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA