| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936944
Identifier: 156936944
GI number: 156936944
Start: 134008
End: 134847
Strand: Reverse
Name: 156936944
Synonym: Igni_0149
Alternate gene names: NA
Gene position: 134847-134008 (Counterclockwise)
Preceding gene: 156936949
Following gene: 156936940
Centisome position: 10.39
GC content: 57.5
Gene sequence:
>840_bases ATGTTGCCCTCGGTGAAGGTTACCAACGACCTCCCGAGGGCCCCGAAGAAGGCCCCGCTCCCGAGGGGTCCAGGACAGAG ACCCCTTTTCCCCAGACGCGAGGCTCTGTTGCTCCCTTATTTCGAGCGCGAAAGGTCCCCAGCACAACATAGAATAGAAA GACAGCTAGAGAAGATAAACTTGGAAGAGGCGACCCTCGCCCTCATAGAGGTCGCCGAGAGGGAGATCTACGTAGCCTCG GAAAAGTTTCCGCATAAGGTGCTGAGGGCCCTCAAGAGGAAGAGCGAAAGCGGCGTGAGCGTGAAGATCATAACTGCGGA CGAGAGCTGCGAGGTCTTGAAGTTCTGGGGCCTGAGGACCTCTAAGTGTATAACCAAAGGTCTAATGAAAGGCACGGTCA TAAGGTTGCCACTGTTAGCTGCGTCCTTGTTCCTCCCCTCCCACCTGAACGCCGCGCTCACCCCGTACTCGCTGCTGGGA GTAATCATAGGCTCCTCGTTGCCCGCCTCCTACGCTCTGCTCCTCGCCGAGCTCTATTGGTGGCGAGAGTACTTCGCCTA CACCTTTATCCCGTGGGTCTTGAAGGCCTCGTGCGCTACTTCATTCATCGAGCTGCTGATCAAAACTTTCATGCCTAAGA ACAAAAATGCGGGGAACGTGGAGGTTAGGACCGTGGACGCGCTCCCCTCTACCCTCGTCGTCGTTGACGGGAAGCGCGGC TTCTCTTCCGAGTGTCGCCTCTCCTCTTCTCGCTGCCTCGCGAACGTTTACCGCGAGGGCGCCCACGAGCTCTTGAGGGA GTTCTCCTTACTTTGGGAGGCCTCGAGGCCCGCAAAATGA
Upstream 100 bases:
>100_bases AAAGGCCGGCGATAAGGAAACTGCGAAGGTAATACTCACAGAGGAGTTCTCCGAAGACAAGCGAAAGATCGTAATCAAAT ACTTGGCCGACCTCGGCTTT
Downstream 100 bases:
>100_bases CCAAACCCTTTAGGTGGCCGGGCTCCACGTCCCACGAGAGGACGTACTTTTCCCCCCTCAACCTCCACAAGGTAAGTCGC CAACACTTCTCCAACTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLPSVKVTNDLPRAPKKAPLPRGPGQRPLFPRREALLLPYFERERSPAQHRIERQLEKINLEEATLALIEVAEREIYVAS EKFPHKVLRALKRKSESGVSVKIITADESCEVLKFWGLRTSKCITKGLMKGTVIRLPLLAASLFLPSHLNAALTPYSLLG VIIGSSLPASYALLLAELYWWREYFAYTFIPWVLKASCATSFIELLIKTFMPKNKNAGNVEVRTVDALPSTLVVVDGKRG FSSECRLSSSRCLANVYREGAHELLREFSLLWEASRPAK
Sequences:
>Translated_279_residues MLPSVKVTNDLPRAPKKAPLPRGPGQRPLFPRREALLLPYFERERSPAQHRIERQLEKINLEEATLALIEVAEREIYVAS EKFPHKVLRALKRKSESGVSVKIITADESCEVLKFWGLRTSKCITKGLMKGTVIRLPLLAASLFLPSHLNAALTPYSLLG VIIGSSLPASYALLLAELYWWREYFAYTFIPWVLKASCATSFIELLIKTFMPKNKNAGNVEVRTVDALPSTLVVVDGKRG FSSECRLSSSRCLANVYREGAHELLREFSLLWEASRPAK >Mature_279_residues MLPSVKVTNDLPRAPKKAPLPRGPGQRPLFPRREALLLPYFERERSPAQHRIERQLEKINLEEATLALIEVAEREIYVAS EKFPHKVLRALKRKSESGVSVKIITADESCEVLKFWGLRTSKCITKGLMKGTVIRLPLLAASLFLPSHLNAALTPYSLLG VIIGSSLPASYALLLAELYWWREYFAYTFIPWVLKASCATSFIELLIKTFMPKNKNAGNVEVRTVDALPSTLVVVDGKRG FSSECRLSSSRCLANVYREGAHELLREFSLLWEASRPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31392; Mature: 31392
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSVKVTNDLPRAPKKAPLPRGPGQRPLFPRREALLLPYFERERSPAQHRIERQLEKIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHCCCHHHHHHHHHHHHCC LEEATLALIEVAEREIYVASEKFPHKVLRALKRKSESGVSVKIITADESCEVLKFWGLRT HHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCH SKCITKGLMKGTVIRLPLLAASLFLPSHLNAALTPYSLLGVIIGSSLPASYALLLAELYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WREYFAYTFIPWVLKASCATSFIELLIKTFMPKNKNAGNVEVRTVDALPSTLVVVDGKRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCC FSSECRLSSSRCLANVYREGAHELLREFSLLWEASRPAK CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLPSVKVTNDLPRAPKKAPLPRGPGQRPLFPRREALLLPYFERERSPAQHRIERQLEKIN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHCCCHHHHHHHHHHHHCC LEEATLALIEVAEREIYVASEKFPHKVLRALKRKSESGVSVKIITADESCEVLKFWGLRT HHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCH SKCITKGLMKGTVIRLPLLAASLFLPSHLNAALTPYSLLGVIIGSSLPASYALLLAELYW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH WREYFAYTFIPWVLKASCATSFIELLIKTFMPKNKNAGNVEVRTVDALPSTLVVVDGKRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCC FSSECRLSSSRCLANVYREGAHELLREFSLLWEASRPAK CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA