Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154248689
Identifier: 154248689
GI number: 154248689
Start: 5298132
End: 5299193
Strand: Reverse
Name: 154248689
Synonym: Xaut_4772
Alternate gene names: NA
Gene position: 5299193-5298132 (Counterclockwise)
Preceding gene: 154248690
Following gene: 154248688
Centisome position: 99.82
GC content: 67.33
Gene sequence:
>1062_bases ATGCCATGGGGTCTTGTCCCGTGGATCGTCTCTCAAGCTCCGGAGCTGCCGATCGTGCGTTACGATATCGAGGCGGATTG GCAGCTTCTCAATACCTGCAATTACAGGTGCGACTATTGCTTTTTCCCGGGCGAGGTCCTGGGCGAAAAGACGGTGCGGC ACGGCACCCCGGATGAGTGGGCGGATGCGTTCTCCGCCACCGGGCTGACCTTCCTCCTGCACCTCACCGGCGGCGAGCCC TCGGCCTATCCCGATTTCGTGGATCTGTGCGCCGCGCTCACCCGGCACCATTTCATCTCCCTGAACAGCAACCTGACCCA GGCATCGCTTGGCGATTTCGCGCGGCGGATCGATCCCGCGCGGGTCAGCGTCATCAATGCGGGCCTTCACCCGGACGAGC GCATGCGCCGGCGGGGGCTGGAGATCTTCAACCGGAATCTGGCGCTGCTGCACGAGGCGGGATTTTCCGTCTTCGCGTCC GTGGTGGCGACGCCGCAGGTGCTGGCGAACGCCGACGAGGTCGCGCGCCAGGTCACGGTGCCGGGGCTGGTGCCAGTTCC CAAGCTGCTGCGGGGCAGCTATCGCGGCCGGACGTATCCCGATGCCTATGATGCGGCCGAGCGGGCGGCCTTCCGGGCCA TGAGCCGGCGTGCCCGGTCGGCCTATGGCGAGTGGCGCGCGGCACGGTCCGAGCCGCCGACGGTCGATCCGTTCGCCGAC GACAACTTTCTCGACGGCACGCCGACATTCCGGGGCACGGTGTGCGCGGCCGGAAGCCGCTTCGTGCGGATCGAGCCGCA GGGGGATGTGTTCCGCTGCGGCTCGGACACCGCGCTGCAGGGCAATATTCTCGCCGGCACGTTCGCGCCGCTCACCGGGC CGCGCCCCTGCGACTCAGGCTACTGCTTCTATTTCTGCCGCAAATATACCGACCCGAAGTACACCCACCGGACTGACGCG GGGCCACGGGCGGATCCACCGGTGTCGGGGCGACAGTCCTTGGTTCCGCCGCATTTGGTGAAGCGAGTAGGCACCGCCCT GCAGCGCATGCTGGGGCGGTGA
Upstream 100 bases:
>100_bases CCGCTGATCACGCCCGCACCGCTGCGGCGGCGGAAGCCGAGGCGGCCTGAGCAATAGACGACCCATCCGGCGTGGCGCTT TCCGTTCCGCGCCGGATGTG
Downstream 100 bases:
>100_bases CGGGTAGCTTCCGGCGGGCGCCGCCGCGGCGCGGAACGGCAGGCGGGGCGGGATGCTCCGGCCACAGGCGTTAGGACGAC CATTGGCTGCCGCGCCCGGT
Product: radical SAM domain-containing protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; Fe-S Oxidoreductase-Like
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MPWGLVPWIVSQAPELPIVRYDIEADWQLLNTCNYRCDYCFFPGEVLGEKTVRHGTPDEWADAFSATGLTFLLHLTGGEP SAYPDFVDLCAALTRHHFISLNSNLTQASLGDFARRIDPARVSVINAGLHPDERMRRRGLEIFNRNLALLHEAGFSVFAS VVATPQVLANADEVARQVTVPGLVPVPKLLRGSYRGRTYPDAYDAAERAAFRAMSRRARSAYGEWRAARSEPPTVDPFAD DNFLDGTPTFRGTVCAAGSRFVRIEPQGDVFRCGSDTALQGNILAGTFAPLTGPRPCDSGYCFYFCRKYTDPKYTHRTDA GPRADPPVSGRQSLVPPHLVKRVGTALQRMLGR
Sequences:
>Translated_353_residues MPWGLVPWIVSQAPELPIVRYDIEADWQLLNTCNYRCDYCFFPGEVLGEKTVRHGTPDEWADAFSATGLTFLLHLTGGEP SAYPDFVDLCAALTRHHFISLNSNLTQASLGDFARRIDPARVSVINAGLHPDERMRRRGLEIFNRNLALLHEAGFSVFAS VVATPQVLANADEVARQVTVPGLVPVPKLLRGSYRGRTYPDAYDAAERAAFRAMSRRARSAYGEWRAARSEPPTVDPFAD DNFLDGTPTFRGTVCAAGSRFVRIEPQGDVFRCGSDTALQGNILAGTFAPLTGPRPCDSGYCFYFCRKYTDPKYTHRTDA GPRADPPVSGRQSLVPPHLVKRVGTALQRMLGR >Mature_352_residues PWGLVPWIVSQAPELPIVRYDIEADWQLLNTCNYRCDYCFFPGEVLGEKTVRHGTPDEWADAFSATGLTFLLHLTGGEPS AYPDFVDLCAALTRHHFISLNSNLTQASLGDFARRIDPARVSVINAGLHPDERMRRRGLEIFNRNLALLHEAGFSVFASV VATPQVLANADEVARQVTVPGLVPVPKLLRGSYRGRTYPDAYDAAERAAFRAMSRRARSAYGEWRAARSEPPTVDPFADD NFLDGTPTFRGTVCAAGSRFVRIEPQGDVFRCGSDTALQGNILAGTFAPLTGPRPCDSGYCFYFCRKYTDPKYTHRTDAG PRADPPVSGRQSLVPPHLVKRVGTALQRMLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39022; Mature: 38890
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWGLVPWIVSQAPELPIVRYDIEADWQLLNTCNYRCDYCFFPGEVLGEKTVRHGTPDEW CCCCCHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCEEECCHHHHHHHHHCCCCCHHH ADAFSATGLTFLLHLTGGEPSAYPDFVDLCAALTRHHFISLNSNLTQASLGDFARRIDPA HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCHH RVSVINAGLHPDERMRRRGLEIFNRNLALLHEAGFSVFASVVATPQVLANADEVARQVTV HEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCC PGLVPVPKLLRGSYRGRTYPDAYDAAERAAFRAMSRRARSAYGEWRAARSEPPTVDPFAD CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DNFLDGTPTFRGTVCAAGSRFVRIEPQGDVFRCGSDTALQGNILAGTFAPLTGPRPCDSG CCCCCCCCCCCCEEEECCCEEEEECCCCCEEECCCCCEEECCEEEEECCCCCCCCCCCCC YCFYFCRKYTDPKYTHRTDAGPRADPPVSGRQSLVPPHLVKRVGTALQRMLGR CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PWGLVPWIVSQAPELPIVRYDIEADWQLLNTCNYRCDYCFFPGEVLGEKTVRHGTPDEW CCCCHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCEEECCHHHHHHHHHCCCCCHHH ADAFSATGLTFLLHLTGGEPSAYPDFVDLCAALTRHHFISLNSNLTQASLGDFARRIDPA HHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCHH RVSVINAGLHPDERMRRRGLEIFNRNLALLHEAGFSVFASVVATPQVLANADEVARQVTV HEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCC PGLVPVPKLLRGSYRGRTYPDAYDAAERAAFRAMSRRARSAYGEWRAARSEPPTVDPFAD CCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DNFLDGTPTFRGTVCAAGSRFVRIEPQGDVFRCGSDTALQGNILAGTFAPLTGPRPCDSG CCCCCCCCCCCCEEEECCCEEEEECCCCCEEECCCCCEEECCEEEEECCCCCCCCCCCCC YCFYFCRKYTDPKYTHRTDAGPRADPPVSGRQSLVPPHLVKRVGTALQRMLGR CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA