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The map label for this gene is 154248683

Identifier: 154248683

GI number: 154248683

Start: 5291448

End: 5292086

Strand: Reverse

Name: 154248683

Synonym: Xaut_4765

Alternate gene names: NA

Gene position: 5292086-5291448 (Counterclockwise)

Preceding gene: 154248684

Following gene: 154248682

Centisome position: 99.68

GC content: 65.41

Gene sequence:

>639_bases
ATGTCCTTCCTGCTCGCCCTCGCCCGGGGCATCGATGCCGTGAACATGCGCATCGGCAAGGCGGCCTCCTGGCTGATCCT
TGTGGCCATCCTTGTCTCTGCGGCCAATGCCGTGGTGCGCAAGCTGTTCGACCTCAGCTCCAATTCCTGGCTGGAGCTGC
AATGGGTGCTGTTCGCAGCGGTGTTCCTGCTGTGCGGGTCGTGGACGCTCATGGACAACGAGCACATCCGCATCGACATC
GTGAATGCGCGCCTCAGCAAACGGGTGCGGGACGGCATCGACATCTTCGGGCACGTCTTCTTCCTGTTGCCCTTCTCCAT
CCTGCTGTTGTGGACCTCCTGGCCCTTCTTCATGGCGTCCTGGTCCATCAACGAGCAGTCGCTGAATGCCGGCGGCCTGC
CGCAATGGCCGGCCAAGCTTCTGGTGCCGGTGGGCTTCTTCTTCCTGACGCTGCAGGGCTTCTCCGAGCTGATCAAGCGC
ATCGCCATCTTTACCGGGCGGATGGAGGACCCCAACGAGCGGGAGGGCGGCAGCCACGCGGCGCTCGCGGCCGAGGCGGA
GCGCCTGCTGGCCGAGGTGGAGGTTCCCGGCGCCGGAACGCCTGTCGTCCCGGCCACTCCCACCGCCCCCAAGCACTGA

Upstream 100 bases:

>100_bases
TCGCCGTGTCTTTGCCTATGGTGCCCCGCCAAGGCCGTATGGCCAAAGAAGAAGCAACCCGAAAAGCGGCACCAGCCGCG
CGCCCAGGGAAACGGTCTCC

Downstream 100 bases:

>100_bases
CGGAGCGCGAGACATGATCAACGCCCGCCTCCTGAAGGCGCGTTTCGTCGCCGCCGCGCTCCTGCTCGCCCTGGTGCTCG
CCGTGGTCCTGCCCGACGTG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP-Type Transporter Small Permease Component; Trap Dicarboxylate Transporter Dctm Subunit; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Small Integral Membrane Tranport Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; Transporter DctQ-Related Transmembrane Protein; Transporter DctQ Related Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSFLLALARGIDAVNMRIGKAASWLILVAILVSAANAVVRKLFDLSSNSWLELQWVLFAAVFLLCGSWTLMDNEHIRIDI
VNARLSKRVRDGIDIFGHVFFLLPFSILLLWTSWPFFMASWSINEQSLNAGGLPQWPAKLLVPVGFFFLTLQGFSELIKR
IAIFTGRMEDPNEREGGSHAALAAEAERLLAEVEVPGAGTPVVPATPTAPKH

Sequences:

>Translated_212_residues
MSFLLALARGIDAVNMRIGKAASWLILVAILVSAANAVVRKLFDLSSNSWLELQWVLFAAVFLLCGSWTLMDNEHIRIDI
VNARLSKRVRDGIDIFGHVFFLLPFSILLLWTSWPFFMASWSINEQSLNAGGLPQWPAKLLVPVGFFFLTLQGFSELIKR
IAIFTGRMEDPNEREGGSHAALAAEAERLLAEVEVPGAGTPVVPATPTAPKH
>Mature_211_residues
SFLLALARGIDAVNMRIGKAASWLILVAILVSAANAVVRKLFDLSSNSWLELQWVLFAAVFLLCGSWTLMDNEHIRIDIV
NARLSKRVRDGIDIFGHVFFLLPFSILLLWTSWPFFMASWSINEQSLNAGGLPQWPAKLLVPVGFFFLTLQGFSELIKRI
AIFTGRMEDPNEREGGSHAALAAEAERLLAEVEVPGAGTPVVPATPTAPKH

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23385; Mature: 23253

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLLALARGIDAVNMRIGKAASWLILVAILVSAANAVVRKLFDLSSNSWLELQWVLFAA
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
VFLLCGSWTLMDNEHIRIDIVNARLSKRVRDGIDIFGHVFFLLPFSILLLWTSWPFFMAS
HHHHHCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEE
WSINEQSLNAGGLPQWPAKLLVPVGFFFLTLQGFSELIKRIAIFTGRMEDPNEREGGSHA
CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
ALAAEAERLLAEVEVPGAGTPVVPATPTAPKH
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFLLALARGIDAVNMRIGKAASWLILVAILVSAANAVVRKLFDLSSNSWLELQWVLFAA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHH
VFLLCGSWTLMDNEHIRIDIVNARLSKRVRDGIDIFGHVFFLLPFSILLLWTSWPFFMAS
HHHHHCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEE
WSINEQSLNAGGLPQWPAKLLVPVGFFFLTLQGFSELIKRIAIFTGRMEDPNEREGGSHA
CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
ALAAEAERLLAEVEVPGAGTPVVPATPTAPKH
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA