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The map label for this gene is yiaN [C]

Identifier: 154248682

GI number: 154248682

Start: 5289488

End: 5291434

Strand: Reverse

Name: yiaN [C]

Synonym: Xaut_4764

Alternate gene names: 154248682

Gene position: 5291434-5289488 (Counterclockwise)

Preceding gene: 154248683

Following gene: 154248681

Centisome position: 99.67

GC content: 66.62

Gene sequence:

>1947_bases
ATGATCAACGCCCGCCTCCTGAAGGCGCGTTTCGTCGCCGCCGCGCTCCTGCTCGCCCTGGTGCTCGCCGTGGTCCTGCC
CGACGTGGCCTTCGCCGCCGAGCCGGGGTTCCGCGGCTGGTTCGTCCACAACATGGCGCCCATCATGTTCGGCGCGCTGG
TGGTGTTCCTGCTGCTGGGCTACCCGGTGGCCTTCTCGCTGGCCGCCAACGGCCTCATCTTCGCGCTGGTCGGCATCTGG
CTCGGCCTGTTCGAGCCCAAGTTCCTGCAGGCGCTGCCCGAACGCGTCTACGGCACCATGAACAACGAGGTGCTGCTGGC
AGTCCCCTTCTTCACCTTCATGGGGCTCATCCTCGAGCGCTCCGGCATGGCGGAGGACCTGCTCGACACCATCGGGCAGG
TGTTCGGCTCCATCCGCGGCGGCCTCGCCTATGCGGTGATCTTCGTGGGCGCTCTGCTGGCTGCCACCACCGGCGTGGTG
GCGGCCTCGGTGATCTCCATGGGCCTCATCTCCCTGCCGATCATGCTGCGCTACGGCTACGACCGGCGCGTGGCCTCGGG
CGTCATCGCCGCCTCGGGCACGCTGGCGCAGATCATTCCGCCCTCCCTCGTGCTCATCGTCATGGCCGACCAGCTGAACC
GCTCGGTGGGCGACATGTATGAGGGCGCCTTCGTGCCGGGCCTGCTGCTCGCCTGCCTTTATGCGCTCTACATCTTTCTG
GTCTCTACCATCTTCCCGAGCGCCGCACCCGGCCTGCCGCTGGAAGCCCAGACCCTGCGCGACCCGGAACAGAAGATCGT
GCCCTCCCGCGTCCTCGGCGCCATCGCCGCGGCCGGCTTCGCCTTCCTGATCGCCACCGGTTCCCTGCCGCATCTCACCA
CAGGCCTCATCCCCGGCGTCGCCAACACGGCGGTGTGGGGCGTGGTGGCTTTCGTGCTGCTCTATTTCATCATGTCGGGA
ACGGCGCGGCTGCTGACGCCCTCGCTCTTCATCGCGCTCTCCCTGTCCATCGCCGGCGCCATCTTCCTGATGACGGAAAC
CGGGGTGAAGTTCGGCGCCGACTTTGTGGTGCTCACCATGTCCGCCACCGTGGGCTTCGCCTTCGTGGTGGCGGTGATCA
ACCGCGTGTTCCGCCTCGGCCTCCTGTCGAAGCTGGCGGAGCAGGTGGTGTTCGTGATGGTGCCACCGCTGGCGCTCATC
TTCCTGGTGCTGGGCACCATCTTCATCGGCGTCGCCACGCCGACCGAGGGCGGCGCCATGGGCTCGGTGGGCGCGCTCAT
CCTCGCTTTCGCCCGTGGCCGGCTGAAGTTCGACCTGATGCGGCAGGCCACCTATTCCACTGCCAAGCTCTCCGCCTTCG
TGCTGTTCATCCTGCTCGGCGCGCGCGTGTTCTCGCTCACCTTCTACGGGGTGGACGGCCACAAGTGGGTGGAGGAACTG
CTGGTGTCGCTGCCCGGCGGGCAGATGGGCTTCCTCATCGCGGTGAACGCGCTGGTGTTCGTGCTGGCCTTCTTCCTCGA
TTATTTCGAGCTGGCCTTTATCATCATCCCGCTGCTGGGGCCGGCGGCCGACAAGCTCGGCATCGACCTCATCTGGTTCG
GCGTGATGCTGGCGGTGAACATGCAGACCTCGTTCATGCATCCGCCCTTCGGCTTCGCCCTGTTCTTCCTGCGCTCGGTG
GCGGCCAAGGTGCCGTACATCGACCGGGTGACGGGCAAGCTGATGCAGCCGGTCACCACCGGCCAGATCTATTGGGGCGC
GGTGCCGTTCGTCTGCATCCAGCTGGTCATGGTGGCCCTCATCATCCTGTTCCCCGGCATGGTGACCCACTACAAGAGCG
GCAGCGTCCAGCTCGACCAGAACCAGATCCAGCAGCAGTTCGAGAACCTGTCTCCCGGCCTCGACGCGGCACCGCCCCCG
CCGCTGGACCTCGGCTTCGGCAAATAG

Upstream 100 bases:

>100_bases
GAGGCGGAGCGCCTGCTGGCCGAGGTGGAGGTTCCCGGCGCCGGAACGCCTGTCGTCCCGGCCACTCCCACCGCCCCCAA
GCACTGACGGAGCGCGAGAC

Downstream 100 bases:

>100_bases
GATCGGCGCCCTTGCCCTGCTAAGGGCGCATTCGGATCGGACATCACGAGGTGGACAAACGTGAAGCGGACGGCATGACG
CCGGCCGCTTCCTCGTGCAT

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 648

Protein sequence:

>648_residues
MINARLLKARFVAAALLLALVLAVVLPDVAFAAEPGFRGWFVHNMAPIMFGALVVFLLLGYPVAFSLAANGLIFALVGIW
LGLFEPKFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVV
AASVISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLACLYALYIFL
VSTIFPSAAPGLPLEAQTLRDPEQKIVPSRVLGAIAAAGFAFLIATGSLPHLTTGLIPGVANTAVWGVVAFVLLYFIMSG
TARLLTPSLFIALSLSIAGAIFLMTETGVKFGADFVVLTMSATVGFAFVVAVINRVFRLGLLSKLAEQVVFVMVPPLALI
FLVLGTIFIGVATPTEGGAMGSVGALILAFARGRLKFDLMRQATYSTAKLSAFVLFILLGARVFSLTFYGVDGHKWVEEL
LVSLPGGQMGFLIAVNALVFVLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSV
AAKVPYIDRVTGKLMQPVTTGQIYWGAVPFVCIQLVMVALIILFPGMVTHYKSGSVQLDQNQIQQQFENLSPGLDAAPPP
PLDLGFGK

Sequences:

>Translated_648_residues
MINARLLKARFVAAALLLALVLAVVLPDVAFAAEPGFRGWFVHNMAPIMFGALVVFLLLGYPVAFSLAANGLIFALVGIW
LGLFEPKFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVV
AASVISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLACLYALYIFL
VSTIFPSAAPGLPLEAQTLRDPEQKIVPSRVLGAIAAAGFAFLIATGSLPHLTTGLIPGVANTAVWGVVAFVLLYFIMSG
TARLLTPSLFIALSLSIAGAIFLMTETGVKFGADFVVLTMSATVGFAFVVAVINRVFRLGLLSKLAEQVVFVMVPPLALI
FLVLGTIFIGVATPTEGGAMGSVGALILAFARGRLKFDLMRQATYSTAKLSAFVLFILLGARVFSLTFYGVDGHKWVEEL
LVSLPGGQMGFLIAVNALVFVLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSV
AAKVPYIDRVTGKLMQPVTTGQIYWGAVPFVCIQLVMVALIILFPGMVTHYKSGSVQLDQNQIQQQFENLSPGLDAAPPP
PLDLGFGK
>Mature_648_residues
MINARLLKARFVAAALLLALVLAVVLPDVAFAAEPGFRGWFVHNMAPIMFGALVVFLLLGYPVAFSLAANGLIFALVGIW
LGLFEPKFLQALPERVYGTMNNEVLLAVPFFTFMGLILERSGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVV
AASVISMGLISLPIMLRYGYDRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLACLYALYIFL
VSTIFPSAAPGLPLEAQTLRDPEQKIVPSRVLGAIAAAGFAFLIATGSLPHLTTGLIPGVANTAVWGVVAFVLLYFIMSG
TARLLTPSLFIALSLSIAGAIFLMTETGVKFGADFVVLTMSATVGFAFVVAVINRVFRLGLLSKLAEQVVFVMVPPLALI
FLVLGTIFIGVATPTEGGAMGSVGALILAFARGRLKFDLMRQATYSTAKLSAFVLFILLGARVFSLTFYGVDGHKWVEEL
LVSLPGGQMGFLIAVNALVFVLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVNMQTSFMHPPFGFALFFLRSV
AAKVPYIDRVTGKLMQPVTTGQIYWGAVPFVCIQLVMVALIILFPGMVTHYKSGSVQLDQNQIQQQFENLSPGLDAAPPP
PLDLGFGK

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 69159; Mature: 69159

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINARLLKARFVAAALLLALVLAVVLPDVAFAAEPGFRGWFVHNMAPIMFGALVVFLLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YPVAFSLAANGLIFALVGIWLGLFEPKFLQALPERVYGTMNNEVLLAVPFFTFMGLILER
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHC
SGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLACLYALYIFL
CHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHH
VSTIFPSAAPGLPLEAQTLRDPEQKIVPSRVLGAIAAAGFAFLIATGSLPHLTTGLIPGV
HHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCH
ANTAVWGVVAFVLLYFIMSGTARLLTPSLFIALSLSIAGAIFLMTETGVKFGADFVVLTM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCEEEEEH
SATVGFAFVVAVINRVFRLGLLSKLAEQVVFVMVPPLALIFLVLGTIFIGVATPTEGGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSVGALILAFARGRLKFDLMRQATYSTAKLSAFVLFILLGARVFSLTFYGVDGHKWVEEL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
LVSLPGGQMGFLIAVNALVFVLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MQTSFMHPPFGFALFFLRSVAAKVPYIDRVTGKLMQPVTTGQIYWGAVPFVCIQLVMVAL
HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHH
IILFPGMVTHYKSGSVQLDQNQIQQQFENLSPGLDAAPPPPLDLGFGK
HHHHCHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINARLLKARFVAAALLLALVLAVVLPDVAFAAEPGFRGWFVHNMAPIMFGALVVFLLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
YPVAFSLAANGLIFALVGIWLGLFEPKFLQALPERVYGTMNNEVLLAVPFFTFMGLILER
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHC
SGMAEDLLDTIGQVFGSIRGGLAYAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRRVASGVIAASGTLAQIIPPSLVLIVMADQLNRSVGDMYEGAFVPGLLLACLYALYIFL
CHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHH
VSTIFPSAAPGLPLEAQTLRDPEQKIVPSRVLGAIAAAGFAFLIATGSLPHLTTGLIPGV
HHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCH
ANTAVWGVVAFVLLYFIMSGTARLLTPSLFIALSLSIAGAIFLMTETGVKFGADFVVLTM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCEEEEEH
SATVGFAFVVAVINRVFRLGLLSKLAEQVVFVMVPPLALIFLVLGTIFIGVATPTEGGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GSVGALILAFARGRLKFDLMRQATYSTAKLSAFVLFILLGARVFSLTFYGVDGHKWVEEL
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
LVSLPGGQMGFLIAVNALVFVLAFFLDYFELAFIIIPLLGPAADKLGIDLIWFGVMLAVN
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
MQTSFMHPPFGFALFFLRSVAAKVPYIDRVTGKLMQPVTTGQIYWGAVPFVCIQLVMVAL
HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHH
IILFPGMVTHYKSGSVQLDQNQIQQQFENLSPGLDAAPPPPLDLGFGK
HHHHCHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]