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The map label for this gene is xseB [H]

Identifier: 154248663

GI number: 154248663

Start: 5266457

End: 5266750

Strand: Reverse

Name: xseB [H]

Synonym: Xaut_4745

Alternate gene names: 154248663

Gene position: 5266750-5266457 (Counterclockwise)

Preceding gene: 154248666

Following gene: 154248656

Centisome position: 99.21

GC content: 70.41

Gene sequence:

>294_bases
ATGGCCGAGGCAGCAAAGGCAACCAGCGCCAAGTCAGCCCAGAGCGCCGGACCGGCCGCGGGCGTGGACAAGCTCAGCTT
CGAGCAGGCGCTGGCGGAGCTGGAGGCCATCGTCGGCAATCTTGAGCGGGGCAGCGTGCCGCTGGAGGAATCCATCGCCA
TGTACGAGCGGGGCGAGGCCTTGAAGATGCGCTGCGAGACCCTGCTGCGGGCGGCGGAAGCCCGCGTCGAGACCATCACC
CGCGACGCCGATGGCCGCCCCTCCGGCACTGCGCCGCTGGATGCGGACGGATAG

Upstream 100 bases:

>100_bases
CGCCTTTGCCCCCTGCGACACCGCCCGAAATTCCGGGACATGGGTGAGCCGGGTCCGGATCGGTATAAGGTGGGCGCAAA
GGGAATCAGTGGAGGCGGCC

Downstream 100 bases:

>100_bases
GGGCTTTCGGCGCGAGCACGGGTTTGGCGTGCCATTACGAAAAAGAGGCGCCTGTGGGCGCCTCTTTGCGTTGGATGAGC
CGTCCGGTCTTGGCTCAGGC

Product: exodeoxyribonuclease VII, small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAEAAKATSAKSAQSAGPAAGVDKLSFEQALAELEAIVGNLERGSVPLEESIAMYERGEALKMRCETLLRAAEARVETIT
RDADGRPSGTAPLDADG

Sequences:

>Translated_97_residues
MAEAAKATSAKSAQSAGPAAGVDKLSFEQALAELEAIVGNLERGSVPLEESIAMYERGEALKMRCETLLRAAEARVETIT
RDADGRPSGTAPLDADG
>Mature_96_residues
AEAAKATSAKSAQSAGPAAGVDKLSFEQALAELEAIVGNLERGSVPLEESIAMYERGEALKMRCETLLRAAEARVETITR
DADGRPSGTAPLDADG

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 10062; Mature: 9931

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAAKATSAKSAQSAGPAAGVDKLSFEQALAELEAIVGNLERGSVPLEESIAMYERGEA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH
LKMRCETLLRAAEARVETITRDADGRPSGTAPLDADG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEAAKATSAKSAQSAGPAAGVDKLSFEQALAELEAIVGNLERGSVPLEESIAMYERGEA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHH
LKMRCETLLRAAEARVETITRDADGRPSGTAPLDADG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA