Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154248171
Identifier: 154248171
GI number: 154248171
Start: 4716611
End: 4717762
Strand: Direct
Name: 154248171
Synonym: Xaut_4251
Alternate gene names: NA
Gene position: 4716611-4717762 (Clockwise)
Preceding gene: 154248168
Following gene: 154248172
Centisome position: 88.84
GC content: 65.36
Gene sequence:
>1152_bases ATGGGCATGCAGTCGATGGTCGATTTCAAGTGGCCGGGCCTTGCGCGCCCGGATGGTGAGCGCATCATCATGAACAGCGG CGCCTTCGTCGCCGTCGATCGCTATCGCGACATTTCCTACGATCCCATCTACCGGCCGCAGGCCCTCTACCATCGCGCCC TGGAGGGTCTTCGCGCCAACAACGACGCCTTCCTGCTACAGGAAGTGGCGACAAACCTTCCCATCTATCGTGACGATACC GGGCCGACGGATTTTCATCTGCATCTCCCGCCGGGTGGATTTCAACTCGTCCTCGTCACCTCGGGCCTGTTCACTTTCGA CTATGACGGCAAGGTGCATTATGTCGGTCCCGGCGCGGTGATGCTGCAAAGCGCCATCGTGCATCGCCAGCTGTTCTACA CCTGGGCCGGCCTGTCGACGGAAGAGAACCTGAAGACGCCGCAATCGGTGGTGCCTGATCCATTGTGCATGGGCTATTCG GGCAAGTTCATCGAAGCCTTCATCACCGATCCGACCACCTTCCCCAATCCGACCGTGGTGGGCTCGGACCACATCAAGGA AGACGAGACCCCTCGCACGGCCTGGAAGCACCCGCTCCACAACCGCCCGGCCGGCGCTAGCTTCTGGTTCCAGGATCCGC TGGCGCTGGATGCGCTGTTCCGCGCCTATCCCGCCGATGCGGCCGACGGCCCGGTCAGGGCGGCCTCGCCGGTGCATGTG CGCGATCTAGGCATCGAGGCGCCCAGCGGTAACCTCGTGACGGGGCACATCATCGCCACCGATCCCCGGGGTGCATCGCT GCTTCCGAAAAATGCCTCCGCCAAGGCCGACGCTGAGGGGCTCGCCAAGGGAGAGGTCGTCATCTACCGCATCATCCGCG GCACCGCCGCCTTCGCGGACGGCTCCGGCAAGCCGCTGGAGCTCGCCACCGGCGACACGGTGACCGCCGGGAAGGGCGCC ATCCGCCTCACGGACGTGGGCGAGGACACCCAGATCCTCCGCCTCGGCCTGCTCAAGGGCATCGAGGACCTCAGGATGTG GACCCCCACCCAGCGCGACGAGATCGACGCCCTGGCGGGCCAGATCATCACCCGCGCGGACCTCCGCAGCGACCGGGTGG CCGGCAAGCCCGTGGGCTACCTTTACGAGTAG
Upstream 100 bases:
>100_bases AAACGTCGAATATAATATTGAATTGACTGCACTCGTGCCGGCTTGAATATGTCTCATCTGACGTCTGGAGCCGTGTCGGC TTCTTGCCGGGGAGATTGCT
Downstream 100 bases:
>100_bases GCGGACCATCGCACTTTTCACCCGGCTGCGAAGGTGTGTTGCCCAAGATCGATATCCGGGCAATGCCTTTGCGGCGTAGA ACAAGCGGGCGAGGCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGMQSMVDFKWPGLARPDGERIIMNSGAFVAVDRYRDISYDPIYRPQALYHRALEGLRANNDAFLLQEVATNLPIYRDDT GPTDFHLHLPPGGFQLVLVTSGLFTFDYDGKVHYVGPGAVMLQSAIVHRQLFYTWAGLSTEENLKTPQSVVPDPLCMGYS GKFIEAFITDPTTFPNPTVVGSDHIKEDETPRTAWKHPLHNRPAGASFWFQDPLALDALFRAYPADAADGPVRAASPVHV RDLGIEAPSGNLVTGHIIATDPRGASLLPKNASAKADAEGLAKGEVVIYRIIRGTAAFADGSGKPLELATGDTVTAGKGA IRLTDVGEDTQILRLGLLKGIEDLRMWTPTQRDEIDALAGQIITRADLRSDRVAGKPVGYLYE
Sequences:
>Translated_383_residues MGMQSMVDFKWPGLARPDGERIIMNSGAFVAVDRYRDISYDPIYRPQALYHRALEGLRANNDAFLLQEVATNLPIYRDDT GPTDFHLHLPPGGFQLVLVTSGLFTFDYDGKVHYVGPGAVMLQSAIVHRQLFYTWAGLSTEENLKTPQSVVPDPLCMGYS GKFIEAFITDPTTFPNPTVVGSDHIKEDETPRTAWKHPLHNRPAGASFWFQDPLALDALFRAYPADAADGPVRAASPVHV RDLGIEAPSGNLVTGHIIATDPRGASLLPKNASAKADAEGLAKGEVVIYRIIRGTAAFADGSGKPLELATGDTVTAGKGA IRLTDVGEDTQILRLGLLKGIEDLRMWTPTQRDEIDALAGQIITRADLRSDRVAGKPVGYLYE >Mature_382_residues GMQSMVDFKWPGLARPDGERIIMNSGAFVAVDRYRDISYDPIYRPQALYHRALEGLRANNDAFLLQEVATNLPIYRDDTG PTDFHLHLPPGGFQLVLVTSGLFTFDYDGKVHYVGPGAVMLQSAIVHRQLFYTWAGLSTEENLKTPQSVVPDPLCMGYSG KFIEAFITDPTTFPNPTVVGSDHIKEDETPRTAWKHPLHNRPAGASFWFQDPLALDALFRAYPADAADGPVRAASPVHVR DLGIEAPSGNLVTGHIIATDPRGASLLPKNASAKADAEGLAKGEVVIYRIIRGTAAFADGSGKPLELATGDTVTAGKGAI RLTDVGEDTQILRLGLLKGIEDLRMWTPTQRDEIDALAGQIITRADLRSDRVAGKPVGYLYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41707; Mature: 41576
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMQSMVDFKWPGLARPDGERIIMNSGAFVAVDRYRDISYDPIYRPQALYHRALEGLRAN CCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC NDAFLLQEVATNLPIYRDDTGPTDFHLHLPPGGFQLVLVTSGLFTFDYDGKVHYVGPGAV CCHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEEEEECCEEEEECCCEEEEECCCHH MLQSAIVHRQLFYTWAGLSTEENLKTPQSVVPDPLCMGYSGKFIEAFITDPTTFPNPTVV HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCEEECCCCCEEEEEECCCCCCCCCEEE GSDHIKEDETPRTAWKHPLHNRPAGASFWFQDPLALDALFRAYPADAADGPVRAASPVHV CCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEE RDLGIEAPSGNLVTGHIIATDPRGASLLPKNASAKADAEGLAKGEVVIYRIIRGTAAFAD EECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEC GSGKPLELATGDTVTAGKGAIRLTDVGEDTQILRLGLLKGIEDLRMWTPTQRDEIDALAG CCCCEEEEECCCEEECCCCEEEEEECCCCHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHH QIITRADLRSDRVAGKPVGYLYE HHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GMQSMVDFKWPGLARPDGERIIMNSGAFVAVDRYRDISYDPIYRPQALYHRALEGLRAN CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC NDAFLLQEVATNLPIYRDDTGPTDFHLHLPPGGFQLVLVTSGLFTFDYDGKVHYVGPGAV CCHHHHHHHHHCCCEEECCCCCCEEEEEECCCCEEEEEEECCEEEEECCCEEEEECCCHH MLQSAIVHRQLFYTWAGLSTEENLKTPQSVVPDPLCMGYSGKFIEAFITDPTTFPNPTVV HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCEEECCCCCEEEEEECCCCCCCCCEEE GSDHIKEDETPRTAWKHPLHNRPAGASFWFQDPLALDALFRAYPADAADGPVRAASPVHV CCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCEE RDLGIEAPSGNLVTGHIIATDPRGASLLPKNASAKADAEGLAKGEVVIYRIIRGTAAFAD EECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEC GSGKPLELATGDTVTAGKGAIRLTDVGEDTQILRLGLLKGIEDLRMWTPTQRDEIDALAG CCCCEEEEECCCEEECCCCEEEEEECCCCHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHH QIITRADLRSDRVAGKPVGYLYE HHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA