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The map label for this gene is yrbE [C]

Identifier: 154248034

GI number: 154248034

Start: 4549610

End: 4551034

Strand: Direct

Name: yrbE [C]

Synonym: Xaut_4113

Alternate gene names: 154248034

Gene position: 4549610-4551034 (Clockwise)

Preceding gene: 154248032

Following gene: 154248035

Centisome position: 85.7

GC content: 66.6

Gene sequence:

>1425_bases
GTGATCTCGACGCGCAGGCGTCTTGTCTGTATGGCTAACCTATCGTTCGTGTGGTCGCTGGAATGTGCCTCCACGGGCGC
AGGACCGGCTGCGTATCGCATCGCGGCGGGTGGAACTGAAAGAGTAAGTGGGCGATTGCGTGTTCGTCGGGACACGCGTC
ACCCATATGCGGGGCGACAGGCGGTCAGAGGTTGGGGCATCGGCTCGGTCAATCCGGGCCGGATCGCCCGGTGCCTCCGG
CAACAAGGAACAGGCCGGCGCCGTTCCGTTTCGCGGCGCGCCCATGGAGACCAAGCGTTGCCCCACGCCTCCCTGATTTC
CGTGCATAGCCAGGACGACCGGCTCACCGTGGCCGGGCGCGGCGCATGGACATCCGAATATGCCGATGAGCTGGAACAGG
CGGTGGACGACACCGCCCGTTCGTATGCCAATCCCAAGGGCATCGAGATCGACCTTTCCGCCGTCGAGCGCATGGACACC
TTCGGCGCCCTCCTGTTCGAGCGGCTGAAGCGGTCCTGGAAGGGCACCGGCGTCGAGCCGCAGGTGAAGGGGCTGGCGCC
CCGCTACAAGGTGCTCATCGAGGAAATGGGCCGGATGGGGCAGGAGCAGCCCCCGCCGGCCCGCCGGCACGAGGCGATCC
TGGAGCGCTTCGGCCACGAGACGGTGAATGTGGCCGCCGATGCCGCGGCGCTGCTGAATTTCGTCGGTGCATCGGTGGCC
GCCATGGGGCGGGTGCTGCTGCGCCCGCGCAGCTTCCGCTTCACCGCCATGGTGAACCAGATGGATCGGGTCGGCCTGCG
GGCGGTGCCGATCATCGTGCTCATCACCTTCCTCATCGGCTGCATCCTGGCCCAGCAGGGCATCTTCAATTTCCGCCGCT
TCGGTGCCGACATCTATGTGGTGGACATGGTGGGCGTGCTGGTGCTGCGCGAGCTAGGCGTGCTCATCGTCGCCATCATG
ATCGCGGGCCGCTCCGGCAGCGCCTACACCGCCGAGCTTGGCTCCATGCGCATGCGCGAGGAGATCGACGCCCTGCGGGT
CATGGGCTTCGACCCGGTGGAGGTGCTGGTGGTGCCGCGCCTTCTGGCGCTGATCATCGCCTTGCCGCTGCTGACCTTCA
TCGGCTCCATGTCGTCCCTGCTCGGGGCCGGGCTGGTGTCCTGGGGCTATGGCGGCATCACGCCCGACGTGTTCCTGGAT
CGCCTCAAGGGCGCCATCGACATGGACCAGTTCAACGTGGGCATGATCAAGGCCCCGTTCATGGCCGCGACCATCGGCAT
CGTCGCGTGCCTGGAAGGCCTGCGCGTGGGGGGCAGCGCGGAATCACTGGGCGCCCACACCACCGCATCGGTGGTGAAGG
CCATCTTCCTCGTCATCGTGATGGACGGCGTCTTCGCCATGTTCTTCGCCGCGATCGACATGTGA

Upstream 100 bases:

>100_bases
TCGATGCTGAGGGCGAGTTGGGCCATGGATTAAGCTTAATATCCGATTCCGGCCATCGCTTCGCGGGTGCCGGAGCGGAT
GATGCCGGGGTGTGTCCTTG

Downstream 100 bases:

>100_bases
GGCGGCATGGACGCGCGCACCTCCACCACCGCCGAGGCGGCACAGAGCCGGGAAGCGATCATCTCCGTCCACGATATCGT
GGTGGGCTTCGGTGATCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MISTRRRLVCMANLSFVWSLECASTGAGPAAYRIAAGGTERVSGRLRVRRDTRHPYAGRQAVRGWGIGSVNPGRIARCLR
QQGTGRRRSVSRRAHGDQALPHASLISVHSQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDT
FGALLFERLKRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRHEAILERFGHETVNVAADAAALLNFVGASVA
AMGRVLLRPRSFRFTAMVNQMDRVGLRAVPIIVLITFLIGCILAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIM
IAGRSGSAYTAELGSMRMREEIDALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLD
RLKGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVFAMFFAAIDM

Sequences:

>Translated_474_residues
MISTRRRLVCMANLSFVWSLECASTGAGPAAYRIAAGGTERVSGRLRVRRDTRHPYAGRQAVRGWGIGSVNPGRIARCLR
QQGTGRRRSVSRRAHGDQALPHASLISVHSQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDT
FGALLFERLKRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRHEAILERFGHETVNVAADAAALLNFVGASVA
AMGRVLLRPRSFRFTAMVNQMDRVGLRAVPIIVLITFLIGCILAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIM
IAGRSGSAYTAELGSMRMREEIDALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLD
RLKGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVFAMFFAAIDM
>Mature_474_residues
MISTRRRLVCMANLSFVWSLECASTGAGPAAYRIAAGGTERVSGRLRVRRDTRHPYAGRQAVRGWGIGSVNPGRIARCLR
QQGTGRRRSVSRRAHGDQALPHASLISVHSQDDRLTVAGRGAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDT
FGALLFERLKRSWKGTGVEPQVKGLAPRYKVLIEEMGRMGQEQPPPARRHEAILERFGHETVNVAADAAALLNFVGASVA
AMGRVLLRPRSFRFTAMVNQMDRVGLRAVPIIVLITFLIGCILAQQGIFNFRRFGADIYVVDMVGVLVLRELGVLIVAIM
IAGRSGSAYTAELGSMRMREEIDALRVMGFDPVEVLVVPRLLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLD
RLKGAIDMDQFNVGMIKAPFMAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVFAMFFAAIDM

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=211, Percent_Identity=32.7014218009479, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 51374; Mature: 51374

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTRRRLVCMANLSFVWSLECASTGAGPAAYRIAAGGTERVSGRLRVRRDTRHPYAGRQ
CCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCHH
AVRGWGIGSVNPGRIARCLRQQGTGRRRSVSRRAHGDQALPHASLISVHSQDDRLTVAGR
HHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHEEEECCCCEEEEEEC
GAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERLKRSWKGTGVEP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QVKGLAPRYKVLIEEMGRMGQEQPPPARRHEAILERFGHETVNVAADAAALLNFVGASVA
HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AMGRVLLRPRSFRFTAMVNQMDRVGLRAVPIIVLITFLIGCILAQQGIFNFRRFGADIYV
HHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEIDALRVMGFDPVEVLVVPR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRLKGAIDMDQFNVGMIKAPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHH
MAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVFAMFFAAIDM
HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISTRRRLVCMANLSFVWSLECASTGAGPAAYRIAAGGTERVSGRLRVRRDTRHPYAGRQ
CCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCHH
AVRGWGIGSVNPGRIARCLRQQGTGRRRSVSRRAHGDQALPHASLISVHSQDDRLTVAGR
HHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHEEEECCCCEEEEEEC
GAWTSEYADELEQAVDDTARSYANPKGIEIDLSAVERMDTFGALLFERLKRSWKGTGVEP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QVKGLAPRYKVLIEEMGRMGQEQPPPARRHEAILERFGHETVNVAADAAALLNFVGASVA
HHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AMGRVLLRPRSFRFTAMVNQMDRVGLRAVPIIVLITFLIGCILAQQGIFNFRRFGADIYV
HHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VDMVGVLVLRELGVLIVAIMIAGRSGSAYTAELGSMRMREEIDALRVMGFDPVEVLVVPR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LLALIIALPLLTFIGSMSSLLGAGLVSWGYGGITPDVFLDRLKGAIDMDQFNVGMIKAPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECHH
MAATIGIVACLEGLRVGGSAESLGAHTTASVVKAIFLVIVMDGVFAMFFAAIDM
HHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA