Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ptxB [H]
Identifier: 154247885
GI number: 154247885
Start: 4385548
End: 4386516
Strand: Direct
Name: ptxB [H]
Synonym: Xaut_3962
Alternate gene names: 154247885
Gene position: 4385548-4386516 (Clockwise)
Preceding gene: 154247884
Following gene: 154247886
Centisome position: 82.61
GC content: 60.47
Gene sequence:
>969_bases ATGACGCTACCGCGCTTTCTCGCACGCACCCTCATGCTTGCCGCCATGTGTCTGGGGCCAAGCATCGCCCATGCTGACTT CAAGCTCGATCCACGCTTCACGGACGCGAATGGCGACATGGTCGCGGACGCGCCCACTGATCCTTCCAAGCAGATCGACC CGGACACGCTGATCTTCTCCTACACCCCCGTTGAGGATCCGGCCGTCTACGCCAAGGTGTGGCAGGAATTCACCGACCAT CTTGCGAAGGTGACCGGCAAGAAGGTGCAGTTCTTCCCCGTGCAGTCCAACGCCGCCCAGCTCGAAGCCATGCGTGCCGG GCGCCTGCATGTGGCCGGCTTCAACACCGGCTCCAATCCCATCGCCGTCGCCTGCTCCGGCTTTGTGCCTTTCGCCATGA TGGCCTCGAAGGATGGCGCCTACGGCTATGAGATGGAGATCATCACCTATCCCGGCTCCGGCATCACTAAGGTTGAAGAC ATCAAGGGTAAGAAGATGGCCTTCACCTCGGAGACCTCCAATTCCGGCTACAAGGCGCCGTCCGCGCTGCTGCGCTCGCA GTTCGGCATGGAGGCGGGCAAGGATTACGAACCCGCCTTCTCCGGCAAGCACGACAATTCCATCATCGGCGTCGCCAACA AGGATTATCCGGCAGCGGCCGTCGCCAATTCGGTGATGAAGCGCATGATCGCCCGCGGCGTGATCAAACCCGAGCAGGTG GTTACCATCTACAAGTCGCAGACCTTCCCCACCACCGGCTATGGCTATGCCTACAATCTGAAGCCCGAGCTTGCCGCCAA GGTGAAAGAGGCGTTCTTCAGCTTCAATTGGGATGGCACTGCTCTCCTGAAGGAGTTCCAGTCGGCCGAGCCGCCGCAGG AGAAATTCATTTCCATCACCTTCAAGGAGACCTGGGCGGTGGTGCGCCAGGTCGATGACGCCATGGGCGTCAGCTACGCC TGCAAGTAA
Upstream 100 bases:
>100_bases CCAGCCGATGGGAACGCCGGCACCGAGCAGATAAGGCTCCGACTTCGAGTTCGCGTACCAGCATCGTCCGATTGAATTAC ACCGCCACTGGAGAGAAGAG
Downstream 100 bases:
>100_bases ACTCTGGAGAGAGGGACTGTGGGATGCTGACCATCGCCGGTCTGTCCAAGCGCTACGCCAAGGGGGACAAGGCCCTCGAT GATGTTTCGCTCAGCATCCC
Product: phosphonate ABC transporter periplasmic phosphonate-binding protein
Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTLPRFLARTLMLAAMCLGPSIAHADFKLDPRFTDANGDMVADAPTDPSKQIDPDTLIFSYTPVEDPAVYAKVWQEFTDH LAKVTGKKVQFFPVQSNAAQLEAMRAGRLHVAGFNTGSNPIAVACSGFVPFAMMASKDGAYGYEMEIITYPGSGITKVED IKGKKMAFTSETSNSGYKAPSALLRSQFGMEAGKDYEPAFSGKHDNSIIGVANKDYPAAAVANSVMKRMIARGVIKPEQV VTIYKSQTFPTTGYGYAYNLKPELAAKVKEAFFSFNWDGTALLKEFQSAEPPQEKFISITFKETWAVVRQVDDAMGVSYA CK
Sequences:
>Translated_322_residues MTLPRFLARTLMLAAMCLGPSIAHADFKLDPRFTDANGDMVADAPTDPSKQIDPDTLIFSYTPVEDPAVYAKVWQEFTDH LAKVTGKKVQFFPVQSNAAQLEAMRAGRLHVAGFNTGSNPIAVACSGFVPFAMMASKDGAYGYEMEIITYPGSGITKVED IKGKKMAFTSETSNSGYKAPSALLRSQFGMEAGKDYEPAFSGKHDNSIIGVANKDYPAAAVANSVMKRMIARGVIKPEQV VTIYKSQTFPTTGYGYAYNLKPELAAKVKEAFFSFNWDGTALLKEFQSAEPPQEKFISITFKETWAVVRQVDDAMGVSYA CK >Mature_321_residues TLPRFLARTLMLAAMCLGPSIAHADFKLDPRFTDANGDMVADAPTDPSKQIDPDTLIFSYTPVEDPAVYAKVWQEFTDHL AKVTGKKVQFFPVQSNAAQLEAMRAGRLHVAGFNTGSNPIAVACSGFVPFAMMASKDGAYGYEMEIITYPGSGITKVEDI KGKKMAFTSETSNSGYKAPSALLRSQFGMEAGKDYEPAFSGKHDNSIIGVANKDYPAAAVANSVMKRMIARGVIKPEQVV TIYKSQTFPTTGYGYAYNLKPELAAKVKEAFFSFNWDGTALLKEFQSAEPPQEKFISITFKETWAVVRQVDDAMGVSYAC K
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 35154; Mature: 35023
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPRFLARTLMLAAMCLGPSIAHADFKLDPRFTDANGDMVADAPTDPSKQIDPDTLIFS CCHHHHHHHHHHHHHHHHCCCEECCCEEECCCEECCCCCEEECCCCCCCCCCCCCEEEEE YTPVEDPAVYAKVWQEFTDHLAKVTGKKVQFFPVQSNAAQLEAMRAGRLHVAGFNTGSNP ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCEEEEEECCCCCCC IAVACSGFVPFAMMASKDGAYGYEMEIITYPGSGITKVEDIKGKKMAFTSETSNSGYKAP EEEEECCCCHHHHEECCCCCCEEEEEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCH SALLRSQFGMEAGKDYEPAFSGKHDNSIIGVANKDYPAAAVANSVMKRMIARGVIKPEQV HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHE VTIYKSQTFPTTGYGYAYNLKPELAAKVKEAFFSFNWDGTALLKEFQSAEPPQEKFISIT EEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHEEEEE FKETWAVVRQVDDAMGVSYACK HHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure TLPRFLARTLMLAAMCLGPSIAHADFKLDPRFTDANGDMVADAPTDPSKQIDPDTLIFS CHHHHHHHHHHHHHHHHCCCEECCCEEECCCEECCCCCEEECCCCCCCCCCCCCEEEEE YTPVEDPAVYAKVWQEFTDHLAKVTGKKVQFFPVQSNAAQLEAMRAGRLHVAGFNTGSNP ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCEEEEEECCCCCCC IAVACSGFVPFAMMASKDGAYGYEMEIITYPGSGITKVEDIKGKKMAFTSETSNSGYKAP EEEEECCCCHHHHEECCCCCCEEEEEEEEECCCCCCCHHHCCCCEEEEECCCCCCCCCCH SALLRSQFGMEAGKDYEPAFSGKHDNSIIGVANKDYPAAAVANSVMKRMIARGVIKPEQV HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHE VTIYKSQTFPTTGYGYAYNLKPELAAKVKEAFFSFNWDGTALLKEFQSAEPPQEKFISIT EEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHEEEEE FKETWAVVRQVDDAMGVSYACK HHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]