Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247884
Identifier: 154247884
GI number: 154247884
Start: 4384222
End: 4385481
Strand: Direct
Name: 154247884
Synonym: Xaut_3961
Alternate gene names: NA
Gene position: 4384222-4385481 (Clockwise)
Preceding gene: 154247883
Following gene: 154247885
Centisome position: 82.58
GC content: 66.19
Gene sequence:
>1260_bases ATGGCGGCATCATCCTCCGCGGGCCTACGCAACTACGCCATCGTCACGGCGGCCTATTGGGGCTTCACGCTGACCGACGG CGCGCTGCGCATGCTGGTGCTGTTCACCTTCTTCAAGCTTGGCTACTCGCCCTTCACCCTCGCGTTCCTGTTCCTGCTCT ATGAGGCGGCGGGCATCGGGGCGAACTTCATCGGAGGCTGGCTCGCCGCCCGCTTCGGCATCACCCGCATGCTGACCGTG GGACTCACGACCCAGATCGCCGGCTTCCTGCTGCTCTCCGCCATGTCGCCCACCTGGGAGACCGCCTTCCTGGTAGCCTG GGTGGTGGCGGCGCAGGGTGTGTGCGGGGTAGCCAAAGACCTCACCAAGACTGCGTCCAAGTCGGCCATCAAGGTGACAG AGGCCGAGGCGAAGGGGAATGCCGAGGGCCGCCTGTTCCGCTGGGTGGCTTGGTTCACCGGCTCCAAGAATGCCATGAAG GGCTTCGGCTTCTTCCTAGGCGGTGTGCTCCTGGAGGCGTTCGGCTTTCGCTTGTCGCTGTGGCTCATGGCTGCCGTGCT GGCGCTGGTGCTTCTCGGCGTGCTGCTTTCCCTACCGCCTATGATGGGCAAGGCCAAGGCGAGCCGTTCGGCAAAGGAAT TGTTCGGCAAGAGCCGGGGAGTGAACCTGCTCGCCGCCGCCCGCGTCGCCTTGTTCGGCGCGCGTGACGTGTGGTTCGTG GTGGGTGTGCCGGTCTTCCTCTATGGGATCGGCTGGACCTTCCCGATGGTGGGCGGCTTCCTCGCGCTGTGGACCATAGG CTATGGCATTGTGCAGGCATCCGCGCCCGCCGTGGTGAGCCGGAGCGCGGACGGCCTGTCCAGGGAAGTGCCGGCGGCGC GCTGGTGGGCGCTCGGCCTCGCCCTAGTGCCGGTGGCCATCGCCGTGCTCCTCGCCGTGACACCCATGCGGCCGGACCTC ATCGTCGTGATCGGGCTCGCCATTTTCGGCGCGGCCTTTGCCGTGAACTCTTCCCTGCACTCCTACCTGATCCTGGCCTA TGCCGGATCGGAGAAGGCAGCCGAGGACGTGGGTTTCTATTACGCCGCCAATGCAGCGGGGCGCTTCATCGGCACCCTCC TGTCCGGCCTGCTCTATCAGGTGGGCGGGATCTACGCCTGCCTCGGGGGGTCGGCCCTGATGCTCGCCGTCTGTTTTGGG ACCACCCTCCTGCTGCCGCTTCATTCCCAGCCGATGGGAACGCCGGCACCGAGCAGATAA
Upstream 100 bases:
>100_bases GGCACCCTGCTCAAGGTCTATGCCTGGTACGACAACGAGATGGGCTATGCCTGCCGCATGGTGGACCTCGCCTGCCATCT CGAACGCGTGGGGCTGTGAG
Downstream 100 bases:
>100_bases GGCTCCGACTTCGAGTTCGCGTACCAGCATCGTCCGATTGAATTACACCGCCACTGGAGAGAAGAGATGACGCTACCGCG CTTTCTCGCACGCACCCTCA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAASSSAGLRNYAIVTAAYWGFTLTDGALRMLVLFTFFKLGYSPFTLAFLFLLYEAAGIGANFIGGWLAARFGITRMLTV GLTTQIAGFLLLSAMSPTWETAFLVAWVVAAQGVCGVAKDLTKTASKSAIKVTEAEAKGNAEGRLFRWVAWFTGSKNAMK GFGFFLGGVLLEAFGFRLSLWLMAAVLALVLLGVLLSLPPMMGKAKASRSAKELFGKSRGVNLLAAARVALFGARDVWFV VGVPVFLYGIGWTFPMVGGFLALWTIGYGIVQASAPAVVSRSADGLSREVPAARWWALGLALVPVAIAVLLAVTPMRPDL IVVIGLAIFGAAFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRFIGTLLSGLLYQVGGIYACLGGSALMLAVCFG TTLLLPLHSQPMGTPAPSR
Sequences:
>Translated_419_residues MAASSSAGLRNYAIVTAAYWGFTLTDGALRMLVLFTFFKLGYSPFTLAFLFLLYEAAGIGANFIGGWLAARFGITRMLTV GLTTQIAGFLLLSAMSPTWETAFLVAWVVAAQGVCGVAKDLTKTASKSAIKVTEAEAKGNAEGRLFRWVAWFTGSKNAMK GFGFFLGGVLLEAFGFRLSLWLMAAVLALVLLGVLLSLPPMMGKAKASRSAKELFGKSRGVNLLAAARVALFGARDVWFV VGVPVFLYGIGWTFPMVGGFLALWTIGYGIVQASAPAVVSRSADGLSREVPAARWWALGLALVPVAIAVLLAVTPMRPDL IVVIGLAIFGAAFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRFIGTLLSGLLYQVGGIYACLGGSALMLAVCFG TTLLLPLHSQPMGTPAPSR >Mature_418_residues AASSSAGLRNYAIVTAAYWGFTLTDGALRMLVLFTFFKLGYSPFTLAFLFLLYEAAGIGANFIGGWLAARFGITRMLTVG LTTQIAGFLLLSAMSPTWETAFLVAWVVAAQGVCGVAKDLTKTASKSAIKVTEAEAKGNAEGRLFRWVAWFTGSKNAMKG FGFFLGGVLLEAFGFRLSLWLMAAVLALVLLGVLLSLPPMMGKAKASRSAKELFGKSRGVNLLAAARVALFGARDVWFVV GVPVFLYGIGWTFPMVGGFLALWTIGYGIVQASAPAVVSRSADGLSREVPAARWWALGLALVPVAIAVLLAVTPMRPDLI VVIGLAIFGAAFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRFIGTLLSGLLYQVGGIYACLGGSALMLAVCFGT TLLLPLHSQPMGTPAPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44108; Mature: 43976
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASSSAGLRNYAIVTAAYWGFTLTDGALRMLVLFTFFKLGYSPFTLAFLFLLYEAAGIG CCCCCCCCCCHHEEEEEECCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC ANFIGGWLAARFGITRMLTVGLTTQIAGFLLLSAMSPTWETAFLVAWVVAAQGVCGVAKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH LTKTASKSAIKVTEAEAKGNAEGRLFRWVAWFTGSKNAMKGFGFFLGGVLLEAFGFRLSL HHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH WLMAAVLALVLLGVLLSLPPMMGKAKASRSAKELFGKSRGVNLLAAARVALFGARDVWFV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH VGVPVFLYGIGWTFPMVGGFLALWTIGYGIVQASAPAVVSRSADGLSREVPAARWWALGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHH ALVPVAIAVLLAVTPMRPDLIVVIGLAIFGAAFAVNSSLHSYLILAYAGSEKAAEDVGFY HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCEE YAANAAGRFIGTLLSGLLYQVGGIYACLGGSALMLAVCFGTTLLLPLHSQPMGTPAPSR EECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEEECCCCCCCCCCCC >Mature Secondary Structure AASSSAGLRNYAIVTAAYWGFTLTDGALRMLVLFTFFKLGYSPFTLAFLFLLYEAAGIG CCCCCCCCCHHEEEEEECCCCEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC ANFIGGWLAARFGITRMLTVGLTTQIAGFLLLSAMSPTWETAFLVAWVVAAQGVCGVAKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH LTKTASKSAIKVTEAEAKGNAEGRLFRWVAWFTGSKNAMKGFGFFLGGVLLEAFGFRLSL HHHHHCCCCEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH WLMAAVLALVLLGVLLSLPPMMGKAKASRSAKELFGKSRGVNLLAAARVALFGARDVWFV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH VGVPVFLYGIGWTFPMVGGFLALWTIGYGIVQASAPAVVSRSADGLSREVPAARWWALGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHH ALVPVAIAVLLAVTPMRPDLIVVIGLAIFGAAFAVNSSLHSYLILAYAGSEKAAEDVGFY HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCEE YAANAAGRFIGTLLSGLLYQVGGIYACLGGSALMLAVCFGTTLLLPLHSQPMGTPAPSR EECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA