Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247869
Identifier: 154247869
GI number: 154247869
Start: 4366703
End: 4367578
Strand: Direct
Name: 154247869
Synonym: Xaut_3946
Alternate gene names: NA
Gene position: 4366703-4367578 (Clockwise)
Preceding gene: 154247868
Following gene: 154247870
Centisome position: 82.25
GC content: 68.26
Gene sequence:
>876_bases ATGAGCGCCGGTTCGCGCATCGACCGCAGGGCGGTCCTTGCTGCCGCTGCTTCCATGGTCGGCGCGACGCTCGTGCCTCC GGTGGCGCGCGCCTCGGCCGGCACCATCCGTTTCGGCCTGACCCCCGTCTTCCTGACCTCCGACCTCGAACTGCTCGGCC GGCTTCAGATCTACCTGCGGCGGGCCACCGGCTTCCCGGTCGAACTCGTCAGCCGGCGGACCTACCAGGAGATCACCGCG CTGCTGGTCTCGGGTCAGCTCGATGCCGCGTGGATCTGCGGCTATCCGTTCGTTGCCCATCGCGACGCGCTCCAGCTGGT CGCGGTTCCGCTGTGGCGCGGGCAGCCGCTCTATCAGTCCTGCCTCATCGTCGACCGGGACCGTGACGCACGGGACTTCC AGGACCTCAAGGGCGATATCCACGCCTTCTCGGACCCCGATTCCAATTCCGGCTTCCTCGTCACCCGCGCGCTTCTGGCG GAGCATGGCCTGAAGCCCCCGTCCTTCTTCGCCCGCACCTTCTTCACCTACGGCCATCGCAACGTAATCCGCGCCGTCGC CTCGGGCCTTGCCCAATCGGGATCGGTCGATGGCTATGTGCTGGAGGTGATGCGGGAGATCGAGCCGGAACTGACATCGC AGGTCGTCATCCTGCGCCGGTCCGAATGGCTCGGCTTCCCGCCCATCGCGGCCCCGCGTCACCCGGCCGACCCACGCGCG CTCGCCGCGCTGACGGAGGCGTTTTCGCGCATGAACAGTGATGAGGACGGCCGGGCGGTTCTCGCCATGCTGCGGCTCGA CGGGTTTGTGCAGCGGGAGGCGAGCCTCTTCGATCCAATTGCCGCAAAGGCGGCGCTCGTTGCGGGCACCGGGTGA
Upstream 100 bases:
>100_bases ATCGTCGTTTCTAACGCCGACACGGATGCCCGTTTGCCTTCCAGGCCATCCGCGCTATTCTTCGATTTAAGAAGAATTAC AAAGCGGGAGGCCCAAGCAA
Downstream 100 bases:
>100_bases CGCCCATGATCACGCGCCTCGACCCTCGCCAGTGGCCCGTCACCCTCAAGGTGCCTTTGGCGGTTGCGGCGCTCATGGTG CTGGTTGGGCTTGCCCTGTC
Product: phosphate/phosphonate ABC transporter
Products: NA
Alternate protein names: Phosphonate ABC Transporter Periplasmic; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSAGSRIDRRAVLAAAASMVGATLVPPVARASAGTIRFGLTPVFLTSDLELLGRLQIYLRRATGFPVELVSRRTYQEITA LLVSGQLDAAWICGYPFVAHRDALQLVAVPLWRGQPLYQSCLIVDRDRDARDFQDLKGDIHAFSDPDSNSGFLVTRALLA EHGLKPPSFFARTFFTYGHRNVIRAVASGLAQSGSVDGYVLEVMREIEPELTSQVVILRRSEWLGFPPIAAPRHPADPRA LAALTEAFSRMNSDEDGRAVLAMLRLDGFVQREASLFDPIAAKAALVAGTG
Sequences:
>Translated_291_residues MSAGSRIDRRAVLAAAASMVGATLVPPVARASAGTIRFGLTPVFLTSDLELLGRLQIYLRRATGFPVELVSRRTYQEITA LLVSGQLDAAWICGYPFVAHRDALQLVAVPLWRGQPLYQSCLIVDRDRDARDFQDLKGDIHAFSDPDSNSGFLVTRALLA EHGLKPPSFFARTFFTYGHRNVIRAVASGLAQSGSVDGYVLEVMREIEPELTSQVVILRRSEWLGFPPIAAPRHPADPRA LAALTEAFSRMNSDEDGRAVLAMLRLDGFVQREASLFDPIAAKAALVAGTG >Mature_290_residues SAGSRIDRRAVLAAAASMVGATLVPPVARASAGTIRFGLTPVFLTSDLELLGRLQIYLRRATGFPVELVSRRTYQEITAL LVSGQLDAAWICGYPFVAHRDALQLVAVPLWRGQPLYQSCLIVDRDRDARDFQDLKGDIHAFSDPDSNSGFLVTRALLAE HGLKPPSFFARTFFTYGHRNVIRAVASGLAQSGSVDGYVLEVMREIEPELTSQVVILRRSEWLGFPPIAAPRHPADPRAL AALTEAFSRMNSDEDGRAVLAMLRLDGFVQREASLFDPIAAKAALVAGTG
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31661; Mature: 31530
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGSRIDRRAVLAAAASMVGATLVPPVARASAGTIRFGLTPVFLTSDLELLGRLQIYLR CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCEEEHHHHHHHHHHHHHHH RATGFPVELVSRRTYQEITALLVSGQLDAAWICGYPFVAHRDALQLVAVPLWRGQPLYQS HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHEECCCCCCHHHHH CLIVDRDRDARDFQDLKGDIHAFSDPDSNSGFLVTRALLAEHGLKPPSFFARTFFTYGHR CEEEECCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHH NVIRAVASGLAQSGSVDGYVLEVMREIEPELTSQVVILRRSEWLGFPPIAAPRHPADPRA HHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHH LAALTEAFSRMNSDEDGRAVLAMLRLDGFVQREASLFDPIAAKAALVAGTG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure SAGSRIDRRAVLAAAASMVGATLVPPVARASAGTIRFGLTPVFLTSDLELLGRLQIYLR CCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEECCCCEEEHHHHHHHHHHHHHHH RATGFPVELVSRRTYQEITALLVSGQLDAAWICGYPFVAHRDALQLVAVPLWRGQPLYQS HCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHEECCCCCCHHHHH CLIVDRDRDARDFQDLKGDIHAFSDPDSNSGFLVTRALLAEHGLKPPSFFARTFFTYGHR CEEEECCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCHH NVIRAVASGLAQSGSVDGYVLEVMREIEPELTSQVVILRRSEWLGFPPIAAPRHPADPRA HHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHH LAALTEAFSRMNSDEDGRAVLAMLRLDGFVQREASLFDPIAAKAALVAGTG HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA