Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247816
Identifier: 154247816
GI number: 154247816
Start: 4312566
End: 4313207
Strand: Direct
Name: 154247816
Synonym: Xaut_3893
Alternate gene names: NA
Gene position: 4312566-4313207 (Clockwise)
Preceding gene: 154247815
Following gene: 154247817
Centisome position: 81.23
GC content: 68.69
Gene sequence:
>642_bases ATGAAGCTCTACCTCGCCGGCCCCGAAGTGTTCCTCGACGACGCGCGCGAGATCGGCCGGCGCAAGGTGGAGCTGTGCAC CCGCTTCGGCTTCATCGGACTCTATCCGCTGGACGGCGACCCGCTGCTGGATGCGGCGGCGGGGGCCGCGAGCCACTCCA TATTCGCCGCCAACCTTGCCCTCATGCGCTCCGCCGATGCGCTTATCGCCAATCTCACCCCATTCCGGGGCATCAGCGCC GATCCGGGCACCGCGTTCGAGGTGGGCTTCGCCTTCGCTCTGGGCAAGCCGGTGGCGGCCTATTCCAACCTGCCGGGTGA GCTGAAGCATCGCGCCCATTCCACCATCGGTGTGGCCGGCGACGCCGAGGCTGTCCCCACGCTCTTGGCCGATGGGCTGC ACGTGGAGGACTTCGGCCATTTCGACAATCTCATGCTGGCGGAAGCGCTTGCCGCCTCCCGGCTGCCGGTGATCCAGGCC CAGGCGCCTGCCGCCGACCCGTTCCGCGACCTCACCCTGTTCGAGCAGGCGCTCTCCGTTTTGGCCGAGGCCCGGTCCGC CGGCCGCCTTGGCACGACCCCATCCCTTTCCCATCCAGAACCCGCCGGACAGGCGCACGGCGAGGAGACCTTCCATGGCT GA
Upstream 100 bases:
>100_bases TCCGCACGTCCGGCTCCGGAAGCGGGAGCCGTGGAAAAAGGACCCGCCCGGCGCCGGCCGAAGACCGGAGCCGATGCCAT CATGGAGACGGGCAAGCCTG
Downstream 100 bases:
>100_bases CAGTTACGACATCATCGTCATCGGCGGCGGGCCCGGCGGCTACGTGGCCGCCATCCGCGCCGCCCAGCTCGGCTTCAAGG TGGCCGTGGTGGAGAAGAGC
Product: nucleoside 2-deoxyribosyltransferase
Products: NA
Alternate protein names: Nucleoside 2-Deoxyribosyltransferase Protein; Nucleoside 2-Deoxyribosyltransferase Family Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKLYLAGPEVFLDDAREIGRRKVELCTRFGFIGLYPLDGDPLLDAAAGAASHSIFAANLALMRSADALIANLTPFRGISA DPGTAFEVGFAFALGKPVAAYSNLPGELKHRAHSTIGVAGDAEAVPTLLADGLHVEDFGHFDNLMLAEALAASRLPVIQA QAPAADPFRDLTLFEQALSVLAEARSAGRLGTTPSLSHPEPAGQAHGEETFHG
Sequences:
>Translated_213_residues MKLYLAGPEVFLDDAREIGRRKVELCTRFGFIGLYPLDGDPLLDAAAGAASHSIFAANLALMRSADALIANLTPFRGISA DPGTAFEVGFAFALGKPVAAYSNLPGELKHRAHSTIGVAGDAEAVPTLLADGLHVEDFGHFDNLMLAEALAASRLPVIQA QAPAADPFRDLTLFEQALSVLAEARSAGRLGTTPSLSHPEPAGQAHGEETFHG >Mature_213_residues MKLYLAGPEVFLDDAREIGRRKVELCTRFGFIGLYPLDGDPLLDAAAGAASHSIFAANLALMRSADALIANLTPFRGISA DPGTAFEVGFAFALGKPVAAYSNLPGELKHRAHSTIGVAGDAEAVPTLLADGLHVEDFGHFDNLMLAEALAASRLPVIQA QAPAADPFRDLTLFEQALSVLAEARSAGRLGTTPSLSHPEPAGQAHGEETFHG
Specific function: Unknown
COG id: COG3613
COG function: function code F; Nucleoside 2-deoxyribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22311; Mature: 22311
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYLAGPEVFLDDAREIGRRKVELCTRFGFIGLYPLDGDPLLDAAAGAASHSIFAANLA CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCHHHHHHHHHHHH LMRSADALIANLTPFRGISADPGTAFEVGFAFALGKPVAAYSNLPGELKHRAHSTIGVAG HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCC DAEAVPTLLADGLHVEDFGHFDNLMLAEALAASRLPVIQAQAPAADPFRDLTLFEQALSV CHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH LAEARSAGRLGTTPSLSHPEPAGQAHGEETFHG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLYLAGPEVFLDDAREIGRRKVELCTRFGFIGLYPLDGDPLLDAAAGAASHSIFAANLA CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCHHHHHHHHHHHH LMRSADALIANLTPFRGISADPGTAFEVGFAFALGKPVAAYSNLPGELKHRAHSTIGVAG HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCCC DAEAVPTLLADGLHVEDFGHFDNLMLAEALAASRLPVIQAQAPAADPFRDLTLFEQALSV CHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH LAEARSAGRLGTTPSLSHPEPAGQAHGEETFHG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA