Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247710
Identifier: 154247710
GI number: 154247710
Start: 4193700
End: 4194431
Strand: Direct
Name: 154247710
Synonym: Xaut_3786
Alternate gene names: NA
Gene position: 4193700-4194431 (Clockwise)
Preceding gene: 154247709
Following gene: 154247711
Centisome position: 78.99
GC content: 67.08
Gene sequence:
>732_bases ATGAAGATCACCTGGTTCGGCCACGCCGCGTTCCGCCTCGACTTTGCGGACAAGGCGGTGCTCATCGATCCCTTCTTCAC CGGCAATCCCAGCTTCAACTCCACGGTGGAGGAGGCCGCCCGAGGGGTGACCCACATCCTGCTCACCCACGGCCATTCCG ACCATGTGGGCGACACCGTCTCCCTGGTGGAGGATGCGGCCGATGCCAGCCGGACCCTGCCGGTGGTGGCCAATCCCGAG ATCTGCGCCTATCTCGCCGCCAAGGGCGCCGGCAATGCCGGGCAGATGATGAACACCGGAGGTTCGCTGGATTGCGGCGG CTTCACCGTGACCATGGTGCGCGCCGACCATTCCTCGGGTGGGCCGGGCAGCCCCTCCGAATATCTGGGCAACCCCACCG GCCTCATCATCCGGGCGCCGGGCGAGCCCACCGTCTGGCACATGGGCGACACCGACATCTATTCCGACATGGCGTTGATG TGCGAGATCCACCGGCCCAAGGTGGTCTTCATTCCCATCGGCGACCGCTTCACCATGGGCCCTGCCGTGGCGGCGCTGGC GGTGAAGCGCTTCCTGCCGGGCGTGGAAGTGGTGGTGCCGTGCCATTACGGCTCCTTCCCCATCCTGGTGCAGGACGCCT CCTTCTTCGCGCAGGCGCTGGCGGACCACCCGGTGAAGGTGGTGGTGCCCGGCCCCGGCGGGTCGTTCGACGCCAACATC ACGCCGGCATAA
Upstream 100 bases:
>100_bases ATCCGTCGCCAGGCTTCAAGACGGAGACCGCGTGATCCGGCCAGCCTGTCCTGCATGCTGACCGGCACGTGCTCCGCGTA GCCAAGGGGCGTCCTTTCCC
Downstream 100 bases:
>100_bases GGTGCGGTTCCGTCCGCCCGGCCGCATCTGCCTTTGGCGGTTGCGCCGGGCGGTGCGGACGGCTACCCCTTCCGCCGCAA GAGGAGGCGCCCGGAGTGGG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKITWFGHAAFRLDFADKAVLIDPFFTGNPSFNSTVEEAARGVTHILLTHGHSDHVGDTVSLVEDAADASRTLPVVANPE ICAYLAAKGAGNAGQMMNTGGSLDCGGFTVTMVRADHSSGGPGSPSEYLGNPTGLIIRAPGEPTVWHMGDTDIYSDMALM CEIHRPKVVFIPIGDRFTMGPAVAALAVKRFLPGVEVVVPCHYGSFPILVQDASFFAQALADHPVKVVVPGPGGSFDANI TPA
Sequences:
>Translated_243_residues MKITWFGHAAFRLDFADKAVLIDPFFTGNPSFNSTVEEAARGVTHILLTHGHSDHVGDTVSLVEDAADASRTLPVVANPE ICAYLAAKGAGNAGQMMNTGGSLDCGGFTVTMVRADHSSGGPGSPSEYLGNPTGLIIRAPGEPTVWHMGDTDIYSDMALM CEIHRPKVVFIPIGDRFTMGPAVAALAVKRFLPGVEVVVPCHYGSFPILVQDASFFAQALADHPVKVVVPGPGGSFDANI TPA >Mature_243_residues MKITWFGHAAFRLDFADKAVLIDPFFTGNPSFNSTVEEAARGVTHILLTHGHSDHVGDTVSLVEDAADASRTLPVVANPE ICAYLAAKGAGNAGQMMNTGGSLDCGGFTVTMVRADHSSGGPGSPSEYLGNPTGLIIRAPGEPTVWHMGDTDIYSDMALM CEIHRPKVVFIPIGDRFTMGPAVAALAVKRFLPGVEVVVPCHYGSFPILVQDASFFAQALADHPVKVVVPGPGGSFDANI TPA
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3786_XANP2 (A7ILW8)
Other databases:
- EMBL: CP000781 - RefSeq: YP_001418668.1 - ProteinModelPortal: A7ILW8 - STRING: A7ILW8 - GeneID: 5423479 - GenomeReviews: CP000781_GR - KEGG: xau:Xaut_3786 - eggNOG: COG2220 - HOGENOM: HBG741314 - OMA: FPIIDQT - ProtClustDB: CLSK980082 - BioCyc: XAUT78245:XAUT_3786-MONOMER - HAMAP: MF_00457 - InterPro: IPR001279 - InterPro: IPR022877 - SMART: SM00849
Pfam domain/function: PF00753 Lactamase_B
EC number: NA
Molecular weight: Translated: 25502; Mature: 25502
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITWFGHAAFRLDFADKAVLIDPFFTGNPSFNSTVEEAARGVTHILLTHGHSDHVGDTV CEEEEEECEEEEEECCCCEEEEECEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCHH SLVEDAADASRTLPVVANPEICAYLAAKGAGNAGQMMNTGGSLDCGGFTVTMVRADHSSG HHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCEECCCCCEECCCEEEEEEEECCCCC GPGSPSEYLGNPTGLIIRAPGEPTVWHMGDTDIYSDMALMCEIHRPKVVFIPIGDRFTMG CCCCCHHHCCCCCEEEEECCCCCEEEECCCCHHHHCEEEEEEECCCEEEEEECCCCEECC PAVAALAVKRFLPGVEVVVPCHYGSFPILVQDASFFAQALADHPVKVVVPGPGGSFDANI HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHHHHCCCEEEEECCCCCCCCCCC TPA CCC >Mature Secondary Structure MKITWFGHAAFRLDFADKAVLIDPFFTGNPSFNSTVEEAARGVTHILLTHGHSDHVGDTV CEEEEEECEEEEEECCCCEEEEECEECCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCHH SLVEDAADASRTLPVVANPEICAYLAAKGAGNAGQMMNTGGSLDCGGFTVTMVRADHSSG HHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCEECCCCCEECCCEEEEEEEECCCCC GPGSPSEYLGNPTGLIIRAPGEPTVWHMGDTDIYSDMALMCEIHRPKVVFIPIGDRFTMG CCCCCHHHCCCCCEEEEECCCCCEEEECCCCHHHHCEEEEEEECCCEEEEEECCCCEECC PAVAALAVKRFLPGVEVVVPCHYGSFPILVQDASFFAQALADHPVKVVVPGPGGSFDANI HHHHHHHHHHHCCCCEEEEEECCCCCEEEEECHHHHHHHHHCCCEEEEECCCCCCCCCCC TPA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA