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The map label for this gene is rfaC [H]

Identifier: 154247695

GI number: 154247695

Start: 4178454

End: 4179461

Strand: Direct

Name: rfaC [H]

Synonym: Xaut_3771

Alternate gene names: 154247695

Gene position: 4178454-4179461 (Clockwise)

Preceding gene: 154247694

Following gene: 154247696

Centisome position: 78.71

GC content: 72.42

Gene sequence:

>1008_bases
ATGAAGGTGCTGCTGGTGAAGCTGTCGTCGCTGGGTGACGTGGTGCACACGTTCCCGGCGCTGACGGACGCCATGGCCGC
GCACCCCGGTCTTCAGCTCGACTGGGCGGTGGAGGAGGCGTTCGCCCCGGTGGCGCGCCTGCATCCTGCGGTGCGGAACA
CCATCGTCGTCCCGCTCCGGCGGATGCTGCGCAAGCCGCTCAAGGCCCTGCGCTCCGGCGAGGCCGGGCGCATCCGCGGC
GCGCTGGGCGCCGATCGCTACGATATCATCATCGATGCCCAGGGCCTGATGAAGAGCGCGGCGGTGGCGGCGCTCGCCCA
AGGGCAGCGCCACGGCTTCGATCGCGCCAGCGCGCGGGAGAGCCTTGCCGCGCTCACCTATCACCGGCGCCATCACGTGC
CGGAAGTGGAGCATATGGCGGTGCGCATCCGCAAGCTGTTCGCCACCGCTCTGGGCTACAGCCTCGACGGCCGTCCGGCG
GATGCGGGGCTGATGCCCGGCGCTCAGACAGGCGCGTCCTACCTCGTCTTCCTCCACGGCACCACCTGGCCCACCAAGAC
CTGGACTCGCGCCGGCTGGCGGGCGCTGGCGGAACAGGCCGGGGCGGCGGGCCTCGACATCCGCCTGTTCGCCCAGGGTG
CGACCGAGCAGGCCCGCGCCGAGGCCATCGCGGACGGACTGCCCAACGTGCACCTCTTGCCGCCGCAGACCCTGGAAACC
CTCGCCCCGGTGATCGCGGGAGCAGTGGGCGTGGTCAGCGCGGATACCGGCCTTGGCCATCTGGCGGCGGCCTATGGGGT
GCCGACGGTGGGACTTTACGGCCCCACCGACCCGCGCCTCACCGGCCTCTATGGCCCCCGGGCGGTGGAGCTGAGGGCGA
CCCGCGACTGCGTCCCATGCGAAAAGGCGCGCTGCCGCATCGCCCCGGAGGTCATCGAGGGACCGCCTTGCCTCGCCGAC
ATCTCCGCCGCCGAGGTCTGGCGGGCGCTGGCGGCGCTGACGGCCTGA

Upstream 100 bases:

>100_bases
GCCGTCCCTGCCACAAGCGGGAATGCCCGCTCGGCACCCTCGCCTGCCTCGAAGGCATCGCCCCCGAAGAGGTTCTCGCC
GCCGCCGAGCAGATGCGCCG

Downstream 100 bases:

>100_bases
ACCGGGCCGAACATGGACAAAAGGGGGCGCGGGTGGCACACCCTGCGCCCGACCTGAAGATGGGATGTTCCACATGACCC
GATCGGTGGCGCTCAGCCGC

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKVLLVKLSSLGDVVHTFPALTDAMAAHPGLQLDWAVEEAFAPVARLHPAVRNTIVVPLRRMLRKPLKALRSGEAGRIRG
ALGADRYDIIIDAQGLMKSAAVAALAQGQRHGFDRASARESLAALTYHRRHHVPEVEHMAVRIRKLFATALGYSLDGRPA
DAGLMPGAQTGASYLVFLHGTTWPTKTWTRAGWRALAEQAGAAGLDIRLFAQGATEQARAEAIADGLPNVHLLPPQTLET
LAPVIAGAVGVVSADTGLGHLAAAYGVPTVGLYGPTDPRLTGLYGPRAVELRATRDCVPCEKARCRIAPEVIEGPPCLAD
ISAAEVWRALAALTA

Sequences:

>Translated_335_residues
MKVLLVKLSSLGDVVHTFPALTDAMAAHPGLQLDWAVEEAFAPVARLHPAVRNTIVVPLRRMLRKPLKALRSGEAGRIRG
ALGADRYDIIIDAQGLMKSAAVAALAQGQRHGFDRASARESLAALTYHRRHHVPEVEHMAVRIRKLFATALGYSLDGRPA
DAGLMPGAQTGASYLVFLHGTTWPTKTWTRAGWRALAEQAGAAGLDIRLFAQGATEQARAEAIADGLPNVHLLPPQTLET
LAPVIAGAVGVVSADTGLGHLAAAYGVPTVGLYGPTDPRLTGLYGPRAVELRATRDCVPCEKARCRIAPEVIEGPPCLAD
ISAAEVWRALAALTA
>Mature_335_residues
MKVLLVKLSSLGDVVHTFPALTDAMAAHPGLQLDWAVEEAFAPVARLHPAVRNTIVVPLRRMLRKPLKALRSGEAGRIRG
ALGADRYDIIIDAQGLMKSAAVAALAQGQRHGFDRASARESLAALTYHRRHHVPEVEHMAVRIRKLFATALGYSLDGRPA
DAGLMPGAQTGASYLVFLHGTTWPTKTWTRAGWRALAEQAGAAGLDIRLFAQGATEQARAEAIADGLPNVHLLPPQTLET
LAPVIAGAVGVVSADTGLGHLAAAYGVPTVGLYGPTDPRLTGLYGPRAVELRATRDCVPCEKARCRIAPEVIEGPPCLAD
ISAAEVWRALAALTA

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=304, Percent_Identity=45.0657894736842, Blast_Score=238, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 35494; Mature: 35494

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLVKLSSLGDVVHTFPALTDAMAAHPGLQLDWAVEEAFAPVARLHPAVRNTIVVPLR
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RMLRKPLKALRSGEAGRIRGALGADRYDIIIDAQGLMKSAAVAALAQGQRHGFDRASARE
HHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHH
SLAALTYHRRHHVPEVEHMAVRIRKLFATALGYSLDGRPADAGLMPGAQTGASYLVFLHG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
TTWPTKTWTRAGWRALAEQAGAAGLDIRLFAQGATEQARAEAIADGLPNVHLLPPQTLET
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEECCCHHHHH
LAPVIAGAVGVVSADTGLGHLAAAYGVPTVGLYGPTDPRLTGLYGPRAVELRATRDCVPC
HHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCC
EKARCRIAPEVIEGPPCLADISAAEVWRALAALTA
HHHHCCCCHHHHCCCCCHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLLVKLSSLGDVVHTFPALTDAMAAHPGLQLDWAVEEAFAPVARLHPAVRNTIVVPLR
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RMLRKPLKALRSGEAGRIRGALGADRYDIIIDAQGLMKSAAVAALAQGQRHGFDRASARE
HHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHH
SLAALTYHRRHHVPEVEHMAVRIRKLFATALGYSLDGRPADAGLMPGAQTGASYLVFLHG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
TTWPTKTWTRAGWRALAEQAGAAGLDIRLFAQGATEQARAEAIADGLPNVHLLPPQTLET
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEECCCHHHHH
LAPVIAGAVGVVSADTGLGHLAAAYGVPTVGLYGPTDPRLTGLYGPRAVELRATRDCVPC
HHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCC
EKARCRIAPEVIEGPPCLADISAAEVWRALAALTA
HHHHCCCCHHHHCCCCCHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527014; 11677609; 1657881 [H]