Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247569
Identifier: 154247569
GI number: 154247569
Start: 4058236
End: 4060029
Strand: Direct
Name: 154247569
Synonym: Xaut_3642
Alternate gene names: NA
Gene position: 4058236-4060029 (Clockwise)
Preceding gene: 154247568
Following gene: 154247570
Centisome position: 76.44
GC content: 60.54
Gene sequence:
>1794_bases GTGGCAGAAACCATCGGCGACTACCTCGTTAAGCTTGGCCTTCAGGTCGATAAGGCGCAAGAGCAGCGCTTTAACGCCGC TCTCGGAAACCTCTCCAAGACCCTGACGACGATGGCGGCCGGCCTCGCCGCTGCTGCCACGGCGATCCAGGTGACAGTCG TCGCGGTTTCCAAGTCGTTCGATAACCTCTATTTCGCGGCCCAGCGGACGGGCTCCACGGTGCAGGGCATCAAGGCCCTG TCCTATGCCTTCGGGCAGATCGGAAGCTCTGGAAACGAAGCCCAGTCGGCCCTTGAGGGGCTGGCGAAGGCCATGCGCAC AAACCCCGGCATCGGGAAGTGGCTCAATGCACAGGGCATCGCGACTGAGGGCCGGAAGACCGAGGAAGTCCTCGGCGACA TCTTCGAGCAGTTCAAGAAGAAGCCATACTATATCGGGGCGCAGTTTGCCCAGCTCGCGGGCATCAGCGAAGACACCTTC AACAAGGCATCGTCGCAGTGGGCCGAAGTCAAGAAGTTCGTCAAGGAATATGAGGAGACGCAGCGCAAGTTCGGGGTAGA CCCTGACAAGGCGGCAAAAAGCTCCAACGAGTTGATGACAGCGTTCCGTGGGCTCATGGGCCACGTTGACGCGCTGTTGA CCAAGATCACCGTCGCTCTACAGCCGCAGCTTACTCAGATCCTCAAGGATGTTGGGGCGTGGTTTGAGCAGCATCAGGAG CAGATCGTCAGGATCTTGAACCAGATCCTTGAGGCGGTGAAGGGGCTGATCTCCGACTTTATCGCGCTCGGGAAGGCGCT CGAGCCTGTCGTCGAGAAGTTCGTGGCGATGGCTGAGGCTCTGACCGGGAAGCACGGCCTCGAAGCCGCACTCCTCTTGG TCACAGGCGGCGCATTGGCTGCATTCGTCGCCAAATGGGCCATCTTCTTCGGGATGCTAGCGAAGTACGCCCCGCTCATC GCGGTCCTCACCGCCATGGGCTGGGATATGTTCTATGCGACGGACCAGGAGAAGCTGGATATCGGAGGCGGCGTCAATGA TGCCATCAACGGCCCTGCCGGCGGCGCTGACAACTGGTGGACGCGGACGCAGAACCGTGTTCGTGGAATGCTGGGCATGG GGCCAGTGGACAATAAGGGCAAGCCGGTAGATCAGGGGGGGCAGTCCCAGTCTCCCGCCGGCGCTCCGAATGCTCCGGGC ATGGCCCAGATCACGACCAAATCGGGCAAGACTGCATGGGTCGGCAAGGAATATCAGGCGCAGTTCCAAGGATTTATCAA CGACCTTGAGGCTCAGGGGTACAACATCAACGATATCGGGGGCTATGCGAACCGCCGGAACGTGAATGACCCCAGTAAAA TGTCGGCCCATGCTTACGGTATGGCAATCGACGTGAACCCATCGGCGAATCCGAACGGGACGACGCAGTCCGACCTTCCC ATCGGGACTGGTGAGCTTGCCAAGAAGTGGGGGCTCGGGTGGGGGATGAACTGGTCTAAGACCAAAGACCCCATGCATTT CTCGACTGACCCATATGAAGGTGGGAAGGCACTTACGCCGGATCAGTTGAAGCAGCTTCAGGACGAACAGGCATCCCGGC TGAAGGACAAGCAGAGCGAGTTGATGGGGGCACCTCTTGGGGGCTCCACCACCCGCTCAGCGTCCCTCTCCAACCGGACC AACATCACGATCTACGGCTCGACCGATCCCGCCGGCACCGCCGCCAACCTCGGCGGGGCGCAGAGCCGGATTGCCTCGGA CCTGATCCGCAACGCACAGAGCGCATTCGTCTGA
Upstream 100 bases:
>100_bases ACTCTCGACCTCTGCGACATCGCCATCATGAACGAGGCAATCGCGGTGCATGGGGAAAATTCCAGGCGCATGCAGGATGC CCTAAGGCCGAAGGTGTGAT
Downstream 100 bases:
>100_bases TGGCCACCATAGAGGAGTTCCTTGTCTCGCTCGGCTATGCCGTCCGCGAGAGCGAGGTCAACGCCTTTGAGGGGACGATC AAGAAGGCTGAATCGCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Tail Protein; Lytic Transglycosylase Catalytic; Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosamidase; Phage Glucosaminidase
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MAETIGDYLVKLGLQVDKAQEQRFNAALGNLSKTLTTMAAGLAAAATAIQVTVVAVSKSFDNLYFAAQRTGSTVQGIKAL SYAFGQIGSSGNEAQSALEGLAKAMRTNPGIGKWLNAQGIATEGRKTEEVLGDIFEQFKKKPYYIGAQFAQLAGISEDTF NKASSQWAEVKKFVKEYEETQRKFGVDPDKAAKSSNELMTAFRGLMGHVDALLTKITVALQPQLTQILKDVGAWFEQHQE QIVRILNQILEAVKGLISDFIALGKALEPVVEKFVAMAEALTGKHGLEAALLLVTGGALAAFVAKWAIFFGMLAKYAPLI AVLTAMGWDMFYATDQEKLDIGGGVNDAINGPAGGADNWWTRTQNRVRGMLGMGPVDNKGKPVDQGGQSQSPAGAPNAPG MAQITTKSGKTAWVGKEYQAQFQGFINDLEAQGYNINDIGGYANRRNVNDPSKMSAHAYGMAIDVNPSANPNGTTQSDLP IGTGELAKKWGLGWGMNWSKTKDPMHFSTDPYEGGKALTPDQLKQLQDEQASRLKDKQSELMGAPLGGSTTRSASLSNRT NITIYGSTDPAGTAANLGGAQSRIASDLIRNAQSAFV
Sequences:
>Translated_597_residues MAETIGDYLVKLGLQVDKAQEQRFNAALGNLSKTLTTMAAGLAAAATAIQVTVVAVSKSFDNLYFAAQRTGSTVQGIKAL SYAFGQIGSSGNEAQSALEGLAKAMRTNPGIGKWLNAQGIATEGRKTEEVLGDIFEQFKKKPYYIGAQFAQLAGISEDTF NKASSQWAEVKKFVKEYEETQRKFGVDPDKAAKSSNELMTAFRGLMGHVDALLTKITVALQPQLTQILKDVGAWFEQHQE QIVRILNQILEAVKGLISDFIALGKALEPVVEKFVAMAEALTGKHGLEAALLLVTGGALAAFVAKWAIFFGMLAKYAPLI AVLTAMGWDMFYATDQEKLDIGGGVNDAINGPAGGADNWWTRTQNRVRGMLGMGPVDNKGKPVDQGGQSQSPAGAPNAPG MAQITTKSGKTAWVGKEYQAQFQGFINDLEAQGYNINDIGGYANRRNVNDPSKMSAHAYGMAIDVNPSANPNGTTQSDLP IGTGELAKKWGLGWGMNWSKTKDPMHFSTDPYEGGKALTPDQLKQLQDEQASRLKDKQSELMGAPLGGSTTRSASLSNRT NITIYGSTDPAGTAANLGGAQSRIASDLIRNAQSAFV >Mature_596_residues AETIGDYLVKLGLQVDKAQEQRFNAALGNLSKTLTTMAAGLAAAATAIQVTVVAVSKSFDNLYFAAQRTGSTVQGIKALS YAFGQIGSSGNEAQSALEGLAKAMRTNPGIGKWLNAQGIATEGRKTEEVLGDIFEQFKKKPYYIGAQFAQLAGISEDTFN KASSQWAEVKKFVKEYEETQRKFGVDPDKAAKSSNELMTAFRGLMGHVDALLTKITVALQPQLTQILKDVGAWFEQHQEQ IVRILNQILEAVKGLISDFIALGKALEPVVEKFVAMAEALTGKHGLEAALLLVTGGALAAFVAKWAIFFGMLAKYAPLIA VLTAMGWDMFYATDQEKLDIGGGVNDAINGPAGGADNWWTRTQNRVRGMLGMGPVDNKGKPVDQGGQSQSPAGAPNAPGM AQITTKSGKTAWVGKEYQAQFQGFINDLEAQGYNINDIGGYANRRNVNDPSKMSAHAYGMAIDVNPSANPNGTTQSDLPI GTGELAKKWGLGWGMNWSKTKDPMHFSTDPYEGGKALTPDQLKQLQDEQASRLKDKQSELMGAPLGGSTTRSASLSNRTN ITIYGSTDPAGTAANLGGAQSRIASDLIRNAQSAFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63709; Mature: 63578
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETIGDYLVKLGLQVDKAQEQRFNAALGNLSKTLTTMAAGLAAAATAIQVTVVAVSKSF CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCC DNLYFAAQRTGSTVQGIKALSYAFGQIGSSGNEAQSALEGLAKAMRTNPGIGKWLNAQGI CHHEEEHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ATEGRKTEEVLGDIFEQFKKKPYYIGAQFAQLAGISEDTFNKASSQWAEVKKFVKEYEET CCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QRKFGVDPDKAAKSSNELMTAFRGLMGHVDALLTKITVALQPQLTQILKDVGAWFEQHQE HHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH QIVRILNQILEAVKGLISDFIALGKALEPVVEKFVAMAEALTGKHGLEAALLLVTGGALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCCHHHH AFVAKWAIFFGMLAKYAPLIAVLTAMGWDMFYATDQEKLDIGGGVNDAINGPAGGADNWW HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCEECCCCCCCCCCCCCCCCCCHH TRTQNRVRGMLGMGPVDNKGKPVDQGGQSQSPAGAPNAPGMAQITTKSGKTAWVGKEYQA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHH QFQGFINDLEAQGYNINDIGGYANRRNVNDPSKMSAHAYGMAIDVNPSANPNGTTQSDLP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCC IGTGELAKKWGLGWGMNWSKTKDPMHFSTDPYEGGKALTPDQLKQLQDEQASRLKDKQSE CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LMGAPLGGSTTRSASLSNRTNITIYGSTDPAGTAANLGGAQSRIASDLIRNAQSAFV HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AETIGDYLVKLGLQVDKAQEQRFNAALGNLSKTLTTMAAGLAAAATAIQVTVVAVSKSF CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCC DNLYFAAQRTGSTVQGIKALSYAFGQIGSSGNEAQSALEGLAKAMRTNPGIGKWLNAQGI CHHEEEHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ATEGRKTEEVLGDIFEQFKKKPYYIGAQFAQLAGISEDTFNKASSQWAEVKKFVKEYEET CCCCCHHHHHHHHHHHHHCCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QRKFGVDPDKAAKSSNELMTAFRGLMGHVDALLTKITVALQPQLTQILKDVGAWFEQHQE HHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH QIVRILNQILEAVKGLISDFIALGKALEPVVEKFVAMAEALTGKHGLEAALLLVTGGALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCCHHHH AFVAKWAIFFGMLAKYAPLIAVLTAMGWDMFYATDQEKLDIGGGVNDAINGPAGGADNWW HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCEECCCCCCCCCCCCCCCCCCHH TRTQNRVRGMLGMGPVDNKGKPVDQGGQSQSPAGAPNAPGMAQITTKSGKTAWVGKEYQA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHHH QFQGFINDLEAQGYNINDIGGYANRRNVNDPSKMSAHAYGMAIDVNPSANPNGTTQSDLP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCC IGTGELAKKWGLGWGMNWSKTKDPMHFSTDPYEGGKALTPDQLKQLQDEQASRLKDKQSE CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LMGAPLGGSTTRSASLSNRTNITIYGSTDPAGTAANLGGAQSRIASDLIRNAQSAFV HCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA