Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154247570
Identifier: 154247570
GI number: 154247570
Start: 4060029
End: 4061957
Strand: Direct
Name: 154247570
Synonym: Xaut_3643
Alternate gene names: NA
Gene position: 4060029-4061957 (Clockwise)
Preceding gene: 154247569
Following gene: 154247571
Centisome position: 76.48
GC content: 63.09
Gene sequence:
>1929_bases ATGGCCACCATAGAGGAGTTCCTTGTCTCGCTCGGCTATGCCGTCCGCGAGAGCGAGGTCAACGCCTTTGAGGGGACGAT CAAGAAGGCTGAATCGCTTGTCCTGAAACTCGGCGCGGCGCTTAATTCCTTTGAACGGAAGGCGGCGGCACTCTTCGTTG GGGCTACGGACGAACTCGACCGGCTGAACTTCGCAGCCCAGCGCACCGGCTCATCCGTCGATGAGCTTCGTGCCCTCACC TACGCCATGCAGCAGTTGGGCATGAGCGGGCGTGGGGCTGAGGCGCTGGTGGGTGGGTTCGCCCAACGCCTGCGGCAGTT TCCCGCCATGGCGAGCCTCCTTCAGGGGCTCGGGGTTCAAGCCTCGGTCAATGGACGGGCCCGCGACCAGGCCGTCGTGA TGCGGGATGCCGTAAAGGCGCTGAACAAGATCGAGTATTACCCCTTGGCAGCGCGCTATGCCGAGGTGCTTGGAATTCCG GAGGAGGATTACAACGTCCTCCGGCAGAACGGCGACAAGATCGACCGCCTCGCAGATGAACAGAAGGCCCTCTTTGATCG CTACGGCGTCAACGGCAATCAGGCGGGGGAAAGCTCCACCCTCCTGAGGATCGGCTGGCGCCAGACGCTCATGACGTTGG ACGCCCTGTTCTCCAAGATCGCCTTGGAGGTCGGCCCGGCTATCACCCCAGTCATTGAGCGGCTGAAAGAGTGGATCGAC AGGAACCAGGACCGCATTGTCGCCGTGTGCCTCGCGCTCGTGGCTGTTGCCGGCGACCTTGCCAATGGCTTGCAGGCATT CGCTGAGAAGCTTTTTGGATCGGGGGATGGCTTCCTCAACTTCCTTGAGTGGGCCACGGGATCAAACGGCATCATCCGCG TGGCGGAGGTGTTCGCGGGAACGTGGGTTGCGACAACCGTCGCTGCCTTCCTCGGTCCTATCGGCATCATCATTGCCGGC CTACTTGGTATCGCGGCCCTGCTCATGCCGGGCAAGGCGAATGCATCTGAGGCGCGGCATCAGGGCGGCGGTGGAAATGC TGCCTCTGGCGGGGCGGCCGCTGGCGGTGCTCGTGGGGCCTCCCACGGCGGGTCTGGATCGCGGGCCCCCTCGGACAAGG GTAAGGGCGCAAGTGGGTCGTGGTGGGGTTCCTTGGGAAAGTCTCGGTCACGCGCAGCCGGAGGCGCTGGTGCGGCGGGG GCATCTGAGCCTTTCACCCCGACGACAAGCACGGATTCCGTCCCGGCTCTGGCCGATGTCCGAAAGCAGTTCGCGGAGGA GCTAAACGACCCTGCCGTCGCGGCGCGCCTCGCTGCCTATGCCGAGGCGGAAGTGGGGAGCCAAGGCGCGGAAGCCCAGC AAGCGTTTATCGAGAGCATTATGAACCGGGCTGCGGCGCGGGGGCAGAGTATCGCTCAGGTGCTATCTAGTAGCAGCAGC TATTTTCCAAGGAGCACGCATAATCGCGCCGCCCAGCTTATGAACAACCCCCGGATCGCCGCAAAGTACCAGGGGATCGT CGCGGCAGTTCTGGGGGGCTCTAACATCTCACTGTTTGCCACCGGAAACGCCTCTGACGGCGTTGGTTTCGGGGGCGGGC CGCGCACGAAAAGCTATGGCGGGGAAGACTTCGGCATTGAAAAGCCCGACATGCCGTGGGTCAAGAGAATGCAGGCGATC ACACGGAAGTCGGAGCCGCCGGGGCCAATGCCGGCGATTCCTCCTGATTTTCAGAATATCGACCCAAACACCATGTTCGA GGCGCCCCCCTTGGGAGCCACGGAAACCACATCCTCTCTCAACGCAGATCAGGTCTCAGAGATTGTGGTGCATGGCGACC CGGACCCGTCCCGGACGGCTGCGGAAGTCGGGGCCGCACAGAGCCGGATCAATGGCGACTTCGTCGAACAAGCTTCAAAG GCTGCGTGA
Upstream 100 bases:
>100_bases ACGGCTCGACCGATCCCGCCGGCACCGCCGCCAACCTCGGCGGGGCGCAGAGCCGGATTGCCTCGGACCTGATCCGCAAC GCACAGAGCGCATTCGTCTG
Downstream 100 bases:
>100_bases TGGTCGATATTGTTGAGGCTGTGGTGGGAACCGTCAGCCAGATCCTCATCGGCTCCGGCCGGTCCATCGGTGGGATCAAG CCAGATATCGTGGTCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosamidase; Phage-Related Tail Protein; Lytic Transglycosylase Catalytic; Phage Glucosaminidase
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MATIEEFLVSLGYAVRESEVNAFEGTIKKAESLVLKLGAALNSFERKAAALFVGATDELDRLNFAAQRTGSSVDELRALT YAMQQLGMSGRGAEALVGGFAQRLRQFPAMASLLQGLGVQASVNGRARDQAVVMRDAVKALNKIEYYPLAARYAEVLGIP EEDYNVLRQNGDKIDRLADEQKALFDRYGVNGNQAGESSTLLRIGWRQTLMTLDALFSKIALEVGPAITPVIERLKEWID RNQDRIVAVCLALVAVAGDLANGLQAFAEKLFGSGDGFLNFLEWATGSNGIIRVAEVFAGTWVATTVAAFLGPIGIIIAG LLGIAALLMPGKANASEARHQGGGGNAASGGAAAGGARGASHGGSGSRAPSDKGKGASGSWWGSLGKSRSRAAGGAGAAG ASEPFTPTTSTDSVPALADVRKQFAEELNDPAVAARLAAYAEAEVGSQGAEAQQAFIESIMNRAAARGQSIAQVLSSSSS YFPRSTHNRAAQLMNNPRIAAKYQGIVAAVLGGSNISLFATGNASDGVGFGGGPRTKSYGGEDFGIEKPDMPWVKRMQAI TRKSEPPGPMPAIPPDFQNIDPNTMFEAPPLGATETTSSLNADQVSEIVVHGDPDPSRTAAEVGAAQSRINGDFVEQASK AA
Sequences:
>Translated_642_residues MATIEEFLVSLGYAVRESEVNAFEGTIKKAESLVLKLGAALNSFERKAAALFVGATDELDRLNFAAQRTGSSVDELRALT YAMQQLGMSGRGAEALVGGFAQRLRQFPAMASLLQGLGVQASVNGRARDQAVVMRDAVKALNKIEYYPLAARYAEVLGIP EEDYNVLRQNGDKIDRLADEQKALFDRYGVNGNQAGESSTLLRIGWRQTLMTLDALFSKIALEVGPAITPVIERLKEWID RNQDRIVAVCLALVAVAGDLANGLQAFAEKLFGSGDGFLNFLEWATGSNGIIRVAEVFAGTWVATTVAAFLGPIGIIIAG LLGIAALLMPGKANASEARHQGGGGNAASGGAAAGGARGASHGGSGSRAPSDKGKGASGSWWGSLGKSRSRAAGGAGAAG ASEPFTPTTSTDSVPALADVRKQFAEELNDPAVAARLAAYAEAEVGSQGAEAQQAFIESIMNRAAARGQSIAQVLSSSSS YFPRSTHNRAAQLMNNPRIAAKYQGIVAAVLGGSNISLFATGNASDGVGFGGGPRTKSYGGEDFGIEKPDMPWVKRMQAI TRKSEPPGPMPAIPPDFQNIDPNTMFEAPPLGATETTSSLNADQVSEIVVHGDPDPSRTAAEVGAAQSRINGDFVEQASK AA >Mature_641_residues ATIEEFLVSLGYAVRESEVNAFEGTIKKAESLVLKLGAALNSFERKAAALFVGATDELDRLNFAAQRTGSSVDELRALTY AMQQLGMSGRGAEALVGGFAQRLRQFPAMASLLQGLGVQASVNGRARDQAVVMRDAVKALNKIEYYPLAARYAEVLGIPE EDYNVLRQNGDKIDRLADEQKALFDRYGVNGNQAGESSTLLRIGWRQTLMTLDALFSKIALEVGPAITPVIERLKEWIDR NQDRIVAVCLALVAVAGDLANGLQAFAEKLFGSGDGFLNFLEWATGSNGIIRVAEVFAGTWVATTVAAFLGPIGIIIAGL LGIAALLMPGKANASEARHQGGGGNAASGGAAAGGARGASHGGSGSRAPSDKGKGASGSWWGSLGKSRSRAAGGAGAAGA SEPFTPTTSTDSVPALADVRKQFAEELNDPAVAARLAAYAEAEVGSQGAEAQQAFIESIMNRAAARGQSIAQVLSSSSSY FPRSTHNRAAQLMNNPRIAAKYQGIVAAVLGGSNISLFATGNASDGVGFGGGPRTKSYGGEDFGIEKPDMPWVKRMQAIT RKSEPPGPMPAIPPDFQNIDPNTMFEAPPLGATETTSSLNADQVSEIVVHGDPDPSRTAAEVGAAQSRINGDFVEQASKA A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66879; Mature: 66748
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIEEFLVSLGYAVRESEVNAFEGTIKKAESLVLKLGAALNSFERKAAALFVGATDELD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH RLNFAAQRTGSSVDELRALTYAMQQLGMSGRGAEALVGGFAQRLRQFPAMASLLQGLGVQ HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE ASVNGRARDQAVVMRDAVKALNKIEYYPLAARYAEVLGIPEEDYNVLRQNGDKIDRLADE EECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH QKALFDRYGVNGNQAGESSTLLRIGWRQTLMTLDALFSKIALEVGPAITPVIERLKEWID HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC RNQDRIVAVCLALVAVAGDLANGLQAFAEKLFGSGDGFLNFLEWATGSNGIIRVAEVFAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHH TWVATTVAAFLGPIGIIIAGLLGIAALLMPGKANASEARHQGGGGNAASGGAAAGGARGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC SHGGSGSRAPSDKGKGASGSWWGSLGKSRSRAAGGAGAAGASEPFTPTTSTDSVPALADV CCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RKQFAEELNDPAVAARLAAYAEAEVGSQGAEAQQAFIESIMNRAAARGQSIAQVLSSSSS HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YFPRSTHNRAAQLMNNPRIAAKYQGIVAAVLGGSNISLFATGNASDGVGFGGGPRTKSYG CCCCCHHHHHHHHHCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC GEDFGIEKPDMPWVKRMQAITRKSEPPGPMPAIPPDFQNIDPNTMFEAPPLGATETTSSL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NADQVSEIVVHGDPDPSRTAAEVGAAQSRINGDFVEQASKAA CHHHHHHEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure ATIEEFLVSLGYAVRESEVNAFEGTIKKAESLVLKLGAALNSFERKAAALFVGATDELD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH RLNFAAQRTGSSVDELRALTYAMQQLGMSGRGAEALVGGFAQRLRQFPAMASLLQGLGVQ HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE ASVNGRARDQAVVMRDAVKALNKIEYYPLAARYAEVLGIPEEDYNVLRQNGDKIDRLADE EECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHH QKALFDRYGVNGNQAGESSTLLRIGWRQTLMTLDALFSKIALEVGPAITPVIERLKEWID HHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC RNQDRIVAVCLALVAVAGDLANGLQAFAEKLFGSGDGFLNFLEWATGSNGIIRVAEVFAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHH TWVATTVAAFLGPIGIIIAGLLGIAALLMPGKANASEARHQGGGGNAASGGAAAGGARGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC SHGGSGSRAPSDKGKGASGSWWGSLGKSRSRAAGGAGAAGASEPFTPTTSTDSVPALADV CCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RKQFAEELNDPAVAARLAAYAEAEVGSQGAEAQQAFIESIMNRAAARGQSIAQVLSSSSS HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YFPRSTHNRAAQLMNNPRIAAKYQGIVAAVLGGSNISLFATGNASDGVGFGGGPRTKSYG CCCCCHHHHHHHHHCCCCHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC GEDFGIEKPDMPWVKRMQAITRKSEPPGPMPAIPPDFQNIDPNTMFEAPPLGATETTSSL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NADQVSEIVVHGDPDPSRTAAEVGAAQSRINGDFVEQASKAA CHHHHHHEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA