Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is hemH [H]
Identifier: 154246753
GI number: 154246753
Start: 3134997
End: 3136058
Strand: Reverse
Name: hemH [H]
Synonym: Xaut_2814
Alternate gene names: 154246753
Gene position: 3136058-3134997 (Counterclockwise)
Preceding gene: 154246755
Following gene: 154246750
Centisome position: 59.07
GC content: 67.14
Gene sequence:
>1062_bases ATGACCGCCAACGTGCCCGCGTTCTCCCCCGACACGACGCACCTGCCCCCCGACCACCCGAAAGTGGCCTTCGGCCGCAT CGGCGTGCTCATCGTCAATCTCGGCACGCCGGAGGCCACCGACTACTGGTCCATGCGGGCGTACCTGAAGGAATTCCTCT CCGACCCGCGGGTGATCGAGGTGAACCGCGCCGTGTGGTGGTTCGTCCTCAACGCCATCATCCTCACCAAGCGGCCCGGC CCCAAGGGTCGCGACTATGCCAGCATCTGGAACAAGGAACGCAACGAGGGTCCGCTGAAGACCATCACCCGCGACCAGGC GGAACAGCTTGCGGCGCAGCTCTCGGGCCTTGATTCGCGCATCGTGGTGGATTTCGCCATGCGCTACGGCAAGCCGCCCA TCGCCGAGCGCCTCGCCGCGCTCCAGGCCCAGGGCTGCGAGCGCATCCTGCTGGTGCCGCTCTATCCGCAATATTCCGCC GCCACCTCCGCCACCGTCTGCGACAAGGCCTTCGATGCGCTGAAAGCCATGCGCTGGCAGCCGACCCTGCGCGTCGCCCC GCCCTGGCACGACGATCCCGTCTATATCGATGCGCTGGCCACATCGCTGGAGCGGCATCTGGCGGCCCTCGATTTCGAGC CCGAGGTGATCCTCGCCTCGTTCCACGGGGTGCCGAAATCCTACCTGCTGAAGGGTGATCCCTACCACTGCCAGTGCGCC AAGACCGCCCGCCTGCTGCGCGCGCGCCTCGACCTTGACGACAAGCGCTTCCGCCTCACCTTCCAGTCGCGCTTCGGCCG CGATGAATGGCTGCGCCCCTACACCGACGCGACGGTGAAAGCGCTGGCGGAAAGCGGGGTGAAGCGGCTCGCCGTGGTCA ATCCCGGCTTCGTCGCCGACTGCCTGGAGACGCTGGAGGAGATCGGGGTGGAGAACCGCGAGATCTTCGAGCACCACGGC GGCGAGAAATTCGCCGCCATCCCCTGCCTCAATGCCAACGCCGAGGGCATGCGCGTGCTCGCCCACGTGGTGGAGCGGGA GTTGAAGGGCTGGGTGGGGTAG
Upstream 100 bases:
>100_bases GCGTATGGATCTGGCCGGGCCTGAAGCGCCGCATCGGCACCCAACCGATTGACGCGCGGGCGCGCAGGCGCCATCTCGCC GGGACATCTTCGAGGAACCC
Downstream 100 bases:
>100_bases GCAGCCACCACACTGTAAGAAATTTCCACGGGGATGAGCATTTTTTCAGCGGAGCAGGAGCCAAACCGCTTCCACTCCGC TAAAAGGCGCGCAACCCCAT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MTANVPAFSPDTTHLPPDHPKVAFGRIGVLIVNLGTPEATDYWSMRAYLKEFLSDPRVIEVNRAVWWFVLNAIILTKRPG PKGRDYASIWNKERNEGPLKTITRDQAEQLAAQLSGLDSRIVVDFAMRYGKPPIAERLAALQAQGCERILLVPLYPQYSA ATSATVCDKAFDALKAMRWQPTLRVAPPWHDDPVYIDALATSLERHLAALDFEPEVILASFHGVPKSYLLKGDPYHCQCA KTARLLRARLDLDDKRFRLTFQSRFGRDEWLRPYTDATVKALAESGVKRLAVVNPGFVADCLETLEEIGVENREIFEHHG GEKFAAIPCLNANAEGMRVLAHVVERELKGWVG
Sequences:
>Translated_353_residues MTANVPAFSPDTTHLPPDHPKVAFGRIGVLIVNLGTPEATDYWSMRAYLKEFLSDPRVIEVNRAVWWFVLNAIILTKRPG PKGRDYASIWNKERNEGPLKTITRDQAEQLAAQLSGLDSRIVVDFAMRYGKPPIAERLAALQAQGCERILLVPLYPQYSA ATSATVCDKAFDALKAMRWQPTLRVAPPWHDDPVYIDALATSLERHLAALDFEPEVILASFHGVPKSYLLKGDPYHCQCA KTARLLRARLDLDDKRFRLTFQSRFGRDEWLRPYTDATVKALAESGVKRLAVVNPGFVADCLETLEEIGVENREIFEHHG GEKFAAIPCLNANAEGMRVLAHVVERELKGWVG >Mature_352_residues TANVPAFSPDTTHLPPDHPKVAFGRIGVLIVNLGTPEATDYWSMRAYLKEFLSDPRVIEVNRAVWWFVLNAIILTKRPGP KGRDYASIWNKERNEGPLKTITRDQAEQLAAQLSGLDSRIVVDFAMRYGKPPIAERLAALQAQGCERILLVPLYPQYSAA TSATVCDKAFDALKAMRWQPTLRVAPPWHDDPVYIDALATSLERHLAALDFEPEVILASFHGVPKSYLLKGDPYHCQCAK TARLLRARLDLDDKRFRLTFQSRFGRDEWLRPYTDATVKALAESGVKRLAVVNPGFVADCLETLEEIGVENREIFEHHGG EKFAAIPCLNANAEGMRVLAHVVERELKGWVG
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=344, Percent_Identity=25, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI60499025, Length=334, Percent_Identity=25.1497005988024, Blast_Score=102, Evalue=5e-22, Organism=Escherichia coli, GI1786681, Length=319, Percent_Identity=40.1253918495298, Blast_Score=225, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6324750, Length=239, Percent_Identity=26.3598326359833, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864156, Length=337, Percent_Identity=24.3323442136499, Blast_Score=86, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39598; Mature: 39467
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANVPAFSPDTTHLPPDHPKVAFGRIGVLIVNLGTPEATDYWSMRAYLKEFLSDPRVIE CCCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE VNRAVWWFVLNAIILTKRPGPKGRDYASIWNKERNEGPLKTITRDQAEQLAAQLSGLDSR ECHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH IVVDFAMRYGKPPIAERLAALQAQGCERILLVPLYPQYSAATSATVCDKAFDALKAMRWQ HHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC PTLRVAPPWHDDPVYIDALATSLERHLAALDFEPEVILASFHGVPKSYLLKGDPYHCQCA CCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEECCCCCEEHHH KTARLLRARLDLDDKRFRLTFQSRFGRDEWLRPYTDATVKALAESGVKRLAVVNPGFVAD HHHHHHHHHCCCCCCCEEEEEHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHH CLETLEEIGVENREIFEHHGGEKFAAIPCLNANAEGMRVLAHVVERELKGWVG HHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TANVPAFSPDTTHLPPDHPKVAFGRIGVLIVNLGTPEATDYWSMRAYLKEFLSDPRVIE CCCCCCCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE VNRAVWWFVLNAIILTKRPGPKGRDYASIWNKERNEGPLKTITRDQAEQLAAQLSGLDSR ECHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCH IVVDFAMRYGKPPIAERLAALQAQGCERILLVPLYPQYSAATSATVCDKAFDALKAMRWQ HHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC PTLRVAPPWHDDPVYIDALATSLERHLAALDFEPEVILASFHGVPKSYLLKGDPYHCQCA CCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHEECCCCCEEHHH KTARLLRARLDLDDKRFRLTFQSRFGRDEWLRPYTDATVKALAESGVKRLAVVNPGFVAD HHHHHHHHHCCCCCCCEEEEEHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEECCCHHHH CLETLEEIGVENREIFEHHGGEKFAAIPCLNANAEGMRVLAHVVERELKGWVG HHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA