BacMap

Definition	Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession	NC_009720
Length	5,308,934

Click here to switch to the map view.

The map label for this gene is fabG2 [H]

Identifier: 154246638

GI number: 154246638

Start: 2987195

End: 2987998

Strand: Reverse

Name: fabG2 [H]

Synonym: Xaut_2698

Alternate gene names: 154246638

Gene position: 2987998-2987195 (Counterclockwise)

Preceding gene: 154246639

Following gene: 154246637

Centisome position: 56.28

GC content: 71.64

Gene sequence:

>804_bases
ATGGCGCAGGAGAACGGGGACTGGCTGGGCCTCAGGGACCGGCTGTGCGTGGTGACGGGTGGCGGGCGGGGCATCGGCCT
CGCCATCGCGCGGGAGTTCCTGGCCGTCGGCGCACGGGTGGTGCTGCTGGGCCGCTCTGCTCCAGCTCTCGCCGCGGCGG
CCGCGACCATCGATCCCGACGGTAAGCGCAGCGCGGTTCGTGCCTGCGATGTGGCGGACACCGCCAGCGTCGCCGAGGCG
GCCGGCTGGGTGGAAGACGCCGTGGGGCCGGTGGACGTGCTCGTCAACAATGCGGCGGTCATGCACCCCGGCGCCCTCGA
CACCCTGGACCCCGCCGATTGGCAGGCCCAGCTCGACGTGGACCTCACCGGCTGCCTGCGCACCGCACAGGCTTTCGGCG
CGGGCATGCTCGCACGGGGCTCGGGAGCGCTGGTGCACATCTCCTCCATCGCGGGGAGCAATGTGCAGCCATCCAGCGGC
GCCTACAGCGCGGCCAAGGCCGCCCTTATCATGCTGTCCCAGCAGTTGGCGGTGGAATGGGGACCCCGCGGCGTGCGCTC
CAATGTGGTCAGCCCGGGCCTCGTGGAGGCGCCCATGAGCGCCGCCTTCTACGCCGTTCCCGGCATACGCGAGAAGCGCG
AGGCGTTCGTACCCGCGCGGCGCATCGGAACGCCGGAGGATTCCGCCGCCGCCGTGGTCTTCCTCGCCAGCGCGCGGGCG
TCCTACATCAACGGGGAGGAGATCGTCGTGGATGGCGGCCTCAGGCGCTCCCTCATGGGCCACATCCCGAGACCGGGATA
CTAA

Upstream 100 bases:

>100_bases
CCTCGCACTGGAGCGCGCACGGCGGGTCGTCCACGCGATCGAGCAACGCCGGCCGGTCGCCGTCTGAGCAGAACAACAAC
CATCAGGAAGGAACGCCGCG

Downstream 100 bases:

>100_bases
GGCGCCCCCTCCAACCACGATTGGACCAGAGGTTCAACCATGAAGGTCCTCGTCACCGGCGGCACCGGATTCATCGCCGC
CTGGATCATCCGCCGCCTGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 2 [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MAQENGDWLGLRDRLCVVTGGGRGIGLAIAREFLAVGARVVLLGRSAPALAAAAATIDPDGKRSAVRACDVADTASVAEA
AGWVEDAVGPVDVLVNNAAVMHPGALDTLDPADWQAQLDVDLTGCLRTAQAFGAGMLARGSGALVHISSIAGSNVQPSSG
AYSAAKAALIMLSQQLAVEWGPRGVRSNVVSPGLVEAPMSAAFYAVPGIREKREAFVPARRIGTPEDSAAAVVFLASARA
SYINGEEIVVDGGLRRSLMGHIPRPGY

Sequences:

>Translated_267_residues
MAQENGDWLGLRDRLCVVTGGGRGIGLAIAREFLAVGARVVLLGRSAPALAAAAATIDPDGKRSAVRACDVADTASVAEA
AGWVEDAVGPVDVLVNNAAVMHPGALDTLDPADWQAQLDVDLTGCLRTAQAFGAGMLARGSGALVHISSIAGSNVQPSSG
AYSAAKAALIMLSQQLAVEWGPRGVRSNVVSPGLVEAPMSAAFYAVPGIREKREAFVPARRIGTPEDSAAAVVFLASARA
SYINGEEIVVDGGLRRSLMGHIPRPGY
>Mature_266_residues
AQENGDWLGLRDRLCVVTGGGRGIGLAIAREFLAVGARVVLLGRSAPALAAAAATIDPDGKRSAVRACDVADTASVAEAA
GWVEDAVGPVDVLVNNAAVMHPGALDTLDPADWQAQLDVDLTGCLRTAQAFGAGMLARGSGALVHISSIAGSNVQPSSGA
YSAAKAALIMLSQQLAVEWGPRGVRSNVVSPGLVEAPMSAAFYAVPGIREKREAFVPARRIGTPEDSAAAVVFLASARAS
YINGEEIVVDGGLRRSLMGHIPRPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=33.8775510204082, Blast_Score=126, Evalue=3e-29,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=32.3076923076923, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI40254992, Length=243, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=33.469387755102, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=30.8943089430894, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=31.3725490196078, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=33.976833976834, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI66933014, Length=193, Percent_Identity=31.0880829015544, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4503301, Length=226, Percent_Identity=30.5309734513274, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI20149619, Length=197, Percent_Identity=29.9492385786802, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=29.5833333333333, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=31.1827956989247, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI4758504, Length=259, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=30.1724137931034, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=32.1243523316062, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4503817, Length=187, Percent_Identity=30.4812834224599, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI31543615, Length=152, Percent_Identity=32.2368421052632, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=26.8041237113402, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI7657478, Length=249, Percent_Identity=28.9156626506024, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4504505, Length=187, Percent_Identity=31.0160427807487, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI223718074, Length=194, Percent_Identity=34.020618556701, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=34.4, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=34.1463414634146, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786812, Length=244, Percent_Identity=33.1967213114754, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=26.171875, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787905, Length=251, Percent_Identity=31.0756972111554, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1788459, Length=195, Percent_Identity=29.7435897435897, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=30.2040816326531, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=25.2, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=27.9527559055118, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787820, Length=228, Percent_Identity=28.0701754385965, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=28.2868525896414, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787526, Length=198, Percent_Identity=28.7878787878788, Blast_Score=65, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=31.7073170731707, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=33.469387755102, Blast_Score=120, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=31.6872427983539, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17560332, Length=273, Percent_Identity=31.8681318681319, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562990, Length=255, Percent_Identity=33.7254901960784, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=31.496062992126, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=30.859375, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=32.183908045977, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI72000259, Length=255, Percent_Identity=32.156862745098, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17538486, Length=275, Percent_Identity=30.5454545454545, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=29.7297297297297, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=255, Percent_Identity=31.3725490196078, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=31.203007518797, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=28.6245353159851, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=31.1787072243346, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=30.078125, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17567345, Length=226, Percent_Identity=25.6637168141593, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=257, Percent_Identity=30.7392996108949, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=257, Percent_Identity=31.1284046692607, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=31.6793893129771, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17561272, Length=241, Percent_Identity=30.2904564315353, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=27.4193548387097, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=28.8, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=257, Percent_Identity=28.4046692607004, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=27.8225806451613, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=276, Percent_Identity=27.8985507246377, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=283, Percent_Identity=26.8551236749117, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193203115, Length=249, Percent_Identity=26.5060240963855, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=186, Percent_Identity=26.3440860215054, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=25.4826254826255, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=25.296442687747, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=195, Percent_Identity=25.6410256410256, Blast_Score=68, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=261, Percent_Identity=28.735632183908, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6322861, Length=194, Percent_Identity=30.4123711340206, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=201, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=33.201581027668, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=33.0677290836653, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=31.2757201646091, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24643142, Length=250, Percent_Identity=30.4, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641232, Length=251, Percent_Identity=31.8725099601594, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=27.2, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=28.3400809716599, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24644337, Length=179, Percent_Identity=33.5195530726257, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI116007234, Length=238, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24648693, Length=200, Percent_Identity=31.5, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI21355889, Length=200, Percent_Identity=31.5, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI116007236, Length=240, Percent_Identity=30, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007232, Length=147, Percent_Identity=37.4149659863946, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356301, Length=191, Percent_Identity=29.8429319371728, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641388, Length=217, Percent_Identity=31.7972350230415, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI18859837, Length=186, Percent_Identity=35.4838709677419, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116007238, Length=192, Percent_Identity=31.7708333333333, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28571387, Length=194, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281364494, Length=209, Percent_Identity=29.6650717703349, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24649181, Length=152, Percent_Identity=32.8947368421053, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=27.979274611399, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24656154, Length=249, Percent_Identity=28.5140562248996, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI19922628, Length=249, Percent_Identity=28.5140562248996, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI17737361, Length=265, Percent_Identity=26.4150943396226, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24640442, Length=201, Percent_Identity=31.3432835820896, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648944, Length=250, Percent_Identity=25.2, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24663911, Length=207, Percent_Identity=29.4685990338164, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355631, Length=180, Percent_Identity=28.8888888888889, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27348; Mature: 27217

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQENGDWLGLRDRLCVVTGGGRGIGLAIAREFLAVGARVVLLGRSAPALAAAAATIDPD
CCCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHEEEECCCC
GKRSAVRACDVADTASVAEAAGWVEDAVGPVDVLVNNAAVMHPGALDTLDPADWQAQLDV
CCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCCCCCCCCEEEEEE
DLTGCLRTAQAFGAGMLARGSGALVHISSIAGSNVQPSSGAYSAAKAALIMLSQQLAVEW
EHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GPRGVRSNVVSPGLVEAPMSAAFYAVPGIREKREAFVPARRIGTPEDSAAAVVFLASARA
CCCCHHHCCCCCCHHHCCHHHHEEECCCCHHHHHHHCCHHHCCCCCCCCEEEEEEECCHH
SYINGEEIVVDGGLRRSLMGHIPRPGY
HHCCCCEEEEECCHHHHHHHCCCCCCC
>Mature Secondary Structure 
AQENGDWLGLRDRLCVVTGGGRGIGLAIAREFLAVGARVVLLGRSAPALAAAAATIDPD
CCCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHEEEECCCC
GKRSAVRACDVADTASVAEAAGWVEDAVGPVDVLVNNAAVMHPGALDTLDPADWQAQLDV
CCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCCCCCCCCEEEEEE
DLTGCLRTAQAFGAGMLARGSGALVHISSIAGSNVQPSSGAYSAAKAALIMLSQQLAVEW
EHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GPRGVRSNVVSPGLVEAPMSAAFYAVPGIREKREAFVPARRIGTPEDSAAAVVFLASARA
CCCCHHHCCCCCCHHHCCHHHHEEECCCCHHHHHHHCCHHHCCCCCCCCEEEEEEECCHH
SYINGEEIVVDGGLRRSLMGHIPRPGY
HHCCCCEEEEECCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]