Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is 154246634
Identifier: 154246634
GI number: 154246634
Start: 2982088
End: 2983332
Strand: Reverse
Name: 154246634
Synonym: Xaut_2694
Alternate gene names: NA
Gene position: 2983332-2982088 (Counterclockwise)
Preceding gene: 154246635
Following gene: 154246633
Centisome position: 56.19
GC content: 66.43
Gene sequence:
>1245_bases ATGGCCATGGATCGCAGGAGCTTTCTCGGCACAAGCCTTGCCGTTACCGCGTTCGGGCTCGGTCCGGCGGGGAGGGCGCG CGCCGCGGACGACACCATCCGCATCGGCCACATCACCGACATGTCCGGCATCTATCGCGATGTGGAAGGACCGACCAGCG TCGCCTGCACCCGGCAGGCCATTGAGGAGTTCACCGCCGCCAATCCGGGCATCCGGGTCGAGTTGGTCGTGGCGGACCAC CAGAACAAGCCGGACGTGGGCCTCACCATCATCCGCAAATGGTTCGACGAGGACGGCATCGACGTCATCACCAACGTGGG CAACAGCGCCATCGCGCTGGGCTCGCGCGGCATCCTGCAGGAGCGCGACAAGGTCTCCATCGTCACCTCCGCGGGCAGTT CCGATCTCACCGGCAAGAGCTGCAGCCCCAATCTCCTGCACTGGAGCTGGGACAGCTGGTGCCTCGCCCATTCCACCGCC ACGGCGCTGGTGAAGACCGGCGGCACGAAGTGGTTCTTCGTCACCGCAGACTATGCCTTCGGCAATGCCGCCCAGGCGGA TGCCACCCGCTTCGTAGAGGCCTCCGGCGGCAAGGTGGCGGGCGCGGTGAAATATCCCTACGGCTCGACCGCGGATTTCT CCTCCTTCCTGCTGCAGGCCCAGGCCTCCGGCGCCAACGTGGTGGCCTTCTGCAATTCCGGCACCGAGCTCATCACCTGC CTGAAGCAGGCGCAGGAATTCGGCCTCGACGCCGGCGGCAAGGTCCGCCTCGCCGCCACCGTGGGATACATCACCGACGT GATCGCCATGGGCCTGCCGGTGGCCCACGGCCTCTCCCTCACCGAAACCTTCTACTGGGACCTCAACGACCGCACCCGCG CCTTCATGAAGCGCATCGCTCCGAAGCTGCCGGCGGGCGTGTTTCCAAACATGAGCCAGGCCGGGGATTATTCCGGCGTC ACCCATTATCTCAAGGCGGTGAAGGCGCTGGGCGTGGCCCGCGCCAAGGCATCCGGGCGAGACACCATCGCCGCCATGAA GCAGATGCCCACGGACGACGACTGTTTCGGCCCCGGCCGCGTGCGTGAGGACGGGCGCAAGATCCACCCAGCCTATCTGT TCTCGGTGAAGGCTCCCGCCGAGAGCAAAGCCCCCGGCGACATCTACAAGCTCGTCTCCACCATCCCGGCCGAAGAGGCC TTCCGGCCTGTCGCCGAAGGCGGCTGCCCCTTCGTGAAGACCTGA
Upstream 100 bases:
>100_bases CATCATGACGTCGGGCTATGTCACCGGGCGGCACCTGGCCGGCGTCTCCGCCCACTGACGAAAACAAAGATAAGACAATA AACCATAAGGGAAAAACGCC
Downstream 100 bases:
>100_bases ATTCGCCCGGCCCCCTGGGCTCCGCGACGTGCATCCCCGGAGCCGAAACCGCTCCGGGGTGCAAAACTCATCAAGGATTG TCATGACCGGATACCGTATC
Product: putative substrate-binding protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; Plasmid Encoded RepA Protein; ABC Transporter Periplasmic Protein; ABC Transporter Subunit
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MAMDRRSFLGTSLAVTAFGLGPAGRARAADDTIRIGHITDMSGIYRDVEGPTSVACTRQAIEEFTAANPGIRVELVVADH QNKPDVGLTIIRKWFDEDGIDVITNVGNSAIALGSRGILQERDKVSIVTSAGSSDLTGKSCSPNLLHWSWDSWCLAHSTA TALVKTGGTKWFFVTADYAFGNAAQADATRFVEASGGKVAGAVKYPYGSTADFSSFLLQAQASGANVVAFCNSGTELITC LKQAQEFGLDAGGKVRLAATVGYITDVIAMGLPVAHGLSLTETFYWDLNDRTRAFMKRIAPKLPAGVFPNMSQAGDYSGV THYLKAVKALGVARAKASGRDTIAAMKQMPTDDDCFGPGRVREDGRKIHPAYLFSVKAPAESKAPGDIYKLVSTIPAEEA FRPVAEGGCPFVKT
Sequences:
>Translated_414_residues MAMDRRSFLGTSLAVTAFGLGPAGRARAADDTIRIGHITDMSGIYRDVEGPTSVACTRQAIEEFTAANPGIRVELVVADH QNKPDVGLTIIRKWFDEDGIDVITNVGNSAIALGSRGILQERDKVSIVTSAGSSDLTGKSCSPNLLHWSWDSWCLAHSTA TALVKTGGTKWFFVTADYAFGNAAQADATRFVEASGGKVAGAVKYPYGSTADFSSFLLQAQASGANVVAFCNSGTELITC LKQAQEFGLDAGGKVRLAATVGYITDVIAMGLPVAHGLSLTETFYWDLNDRTRAFMKRIAPKLPAGVFPNMSQAGDYSGV THYLKAVKALGVARAKASGRDTIAAMKQMPTDDDCFGPGRVREDGRKIHPAYLFSVKAPAESKAPGDIYKLVSTIPAEEA FRPVAEGGCPFVKT >Mature_413_residues AMDRRSFLGTSLAVTAFGLGPAGRARAADDTIRIGHITDMSGIYRDVEGPTSVACTRQAIEEFTAANPGIRVELVVADHQ NKPDVGLTIIRKWFDEDGIDVITNVGNSAIALGSRGILQERDKVSIVTSAGSSDLTGKSCSPNLLHWSWDSWCLAHSTAT ALVKTGGTKWFFVTADYAFGNAAQADATRFVEASGGKVAGAVKYPYGSTADFSSFLLQAQASGANVVAFCNSGTELITCL KQAQEFGLDAGGKVRLAATVGYITDVIAMGLPVAHGLSLTETFYWDLNDRTRAFMKRIAPKLPAGVFPNMSQAGDYSGVT HYLKAVKALGVARAKASGRDTIAAMKQMPTDDDCFGPGRVREDGRKIHPAYLFSVKAPAESKAPGDIYKLVSTIPAEEAF RPVAEGGCPFVKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43933; Mature: 43802
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDRRSFLGTSLAVTAFGLGPAGRARAADDTIRIGHITDMSGIYRDVEGPTSVACTRQA CCCCCHHHHCCHHEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHHCCCCCHHHHHHHHH IEEFTAANPGIRVELVVADHQNKPDVGLTIIRKWFDEDGIDVITNVGNSAIALGSRGILQ HHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCC ERDKVSIVTSAGSSDLTGKSCSPNLLHWSWDSWCLAHSTATALVKTGGTKWFFVTADYAF CCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHEECCCCEEEEEEEECCC GNAAQADATRFVEASGGKVAGAVKYPYGSTADFSSFLLQAQASGANVVAFCNSGTELITC CCCCCHHHHHEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHH LKQAQEFGLDAGGKVRLAATVGYITDVIAMGLPVAHGLSLTETFYWDLNDRTRAFMKRIA HHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCHHCCCCEEEEEEEECCHHHHHHHHHHH PKLPAGVFPNMSQAGDYSGVTHYLKAVKALGVARAKASGRDTIAAMKQMPTDDDCFGPGR HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC VREDGRKIHPAYLFSVKAPAESKAPGDIYKLVSTIPAEEAFRPVAEGGCPFVKT CCCCCCEECCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AMDRRSFLGTSLAVTAFGLGPAGRARAADDTIRIGHITDMSGIYRDVEGPTSVACTRQA CCCCHHHHCCHHEEEEECCCCCCCCCCCCCEEEEEEEECHHHHHHCCCCCHHHHHHHHH IEEFTAANPGIRVELVVADHQNKPDVGLTIIRKWFDEDGIDVITNVGNSAIALGSRGILQ HHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCCCC ERDKVSIVTSAGSSDLTGKSCSPNLLHWSWDSWCLAHSTATALVKTGGTKWFFVTADYAF CCCCEEEEEECCCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHEECCCCEEEEEEEECCC GNAAQADATRFVEASGGKVAGAVKYPYGSTADFSSFLLQAQASGANVVAFCNSGTELITC CCCCCHHHHHEEECCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHH LKQAQEFGLDAGGKVRLAATVGYITDVIAMGLPVAHGLSLTETFYWDLNDRTRAFMKRIA HHHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCHHCCCCEEEEEEEECCHHHHHHHHHHH PKLPAGVFPNMSQAGDYSGVTHYLKAVKALGVARAKASGRDTIAAMKQMPTDDDCFGPGR HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC VREDGRKIHPAYLFSVKAPAESKAPGDIYKLVSTIPAEEAFRPVAEGGCPFVKT CCCCCCEECCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA